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KT895374.1__ALN97822.1__Bp8pS_143__00143

Bact-Vir

KT895374.1__ALN97822.1__Bp8pS_143__00143

Identity

Accession:
KT895374 ↗
Kingdom:
phage

Quality

91.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Takahashivirus› Bacillus_phage_vB_BpuM-BpSp

TaxID: 1739968

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-26_224-320
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.64 26.0 3.18e-01 82.0% 56.0%
3ci0I00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.62 26.0 3.19e-01 82.0% 59.0%
3ebrA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 42.0 3.87e-01 72.1% 71.8%
4e2gC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 41.0 4.14e-01 72.1% 75.4%
1n9pA00 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.58 43.0 3.66e-01 77.0% 70.1%
5i0fB04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 31.0 3.63e-01 93.4% 75.0%
4hslA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 39.0 3.60e-01 71.3% 71.1%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.56 24.0 3.52e-01 79.5% 87.5%
3s7iB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 45.0 3.94e-01 87.7% 92.4%
6l4cA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 44.0 3.83e-01 84.4% 93.5%
5cadA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 44.0 3.84e-01 87.7% 90.7%
4mkmA01 2.60.40.3930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.51e-01 72.1% 91.1%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 39.0 3.44e-01 77.0% 92.1%
3l2hA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 37.0 3.55e-01 75.4% 74.8%
2vr5B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.32e-01 70.5% 89.9%
2qnkA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 45.0 3.48e-01 100.0% 72.0%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3484744 11.1.1.907 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BBS7_GAE 0.63 44.0 4.52e-01 72.1% 95.0%
3727125 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 41.0 4.27e-01 72.1% 93.0%
3964888 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.58 50.0 4.18e-01 92.6% 81.4%
5057957 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 39.0 4.08e-01 70.5% 97.4%
3420342 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 40.0 3.50e-01 73.0% 93.7%
5054833 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 40.0 3.69e-01 72.1% 77.4%
4298480 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.56 46.0 3.73e-01 88.5% 77.4%
4329714 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.56 42.0 3.80e-01 78.7% 95.8%
3816194 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.56 46.0 3.83e-01 88.5% 85.7%
3346323 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 3.67e-01 73.0% 93.3%
3649764 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 3.44e-01 73.0% 84.4%
3969691 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.55 40.0 3.65e-01 77.0% 79.4%
4990903 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 37.0 3.99e-01 71.3% 98.1%
5055241 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 37.0 3.67e-01 72.1% 97.7%
5033005 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 3.51e-01 70.5% 84.9%
5068070 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 3.53e-01 70.5% 91.9%
3643822 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 37.0 3.39e-01 73.0% 93.9%
3192440 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 37.0 3.87e-01 72.1% 92.7%
None — 0.52 43.0 3.62e-01 89.3% 87.7%
3264984 11.1.1.843 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.52 37.0 3.58e-01 73.8% 83.6%
3420076 11.1.1.51 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 0.52 36.0 3.34e-01 72.1% 83.7%
380489 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 37.0 3.46e-01 76.2% 70.4%
368152 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.51 37.0 3.46e-01 76.2% 73.4%
3307366 11.1.1.51 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 0.51 37.0 3.51e-01 76.2% 90.0%
D2 high residues 38-220
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00092.35 best VWA 40.9 3.70e-10 94.5% 97.1%
PF13519.13 VWA_2 30.0 9.20e-07 57.9% 96.3%
CATH (81)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7b7pA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.90 87.0 7.53e-01 100.0% 99.2%
7w6bA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.90 84.0 7.12e-01 96.7% 99.6%
4fx5A02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.88 85.0 8.49e-01 99.5% 98.4%
1auqA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.88 85.0 8.06e-01 100.0% 89.9%
5nusA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.87 81.0 7.64e-01 96.7% 97.2%
1shuX00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.87 80.0 8.05e-01 99.5% 96.7%
3gxbA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.86 79.0 8.07e-01 98.9% 98.3%
1bho100 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.85 82.0 8.10e-01 99.5% 99.5%
4f1jA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.85 81.0 7.86e-01 100.0% 96.5%
1atzB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.85 81.0 8.07e-01 100.0% 96.8%
7zs9401 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.85 79.0 7.27e-01 96.7% 99.6%
1aoxA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.84 81.0 7.81e-01 100.0% 97.0%
1jeyA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.84 78.0 7.46e-01 96.7% 99.0%
4wfqA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.84 81.0 7.96e-01 100.0% 96.9%
4igiA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.84 81.0 7.86e-01 100.0% 92.9%
2nutA03 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.84 80.0 7.04e-01 100.0% 98.8%
4cn8A02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.84 81.0 7.95e-01 100.0% 95.8%
1m2vB04 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.84 79.0 7.17e-01 98.9% 98.7%
6snkA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.83 79.0 7.90e-01 98.9% 98.9%
3ibsA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.83 79.0 7.58e-01 100.0% 98.5%
2i6qA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.83 79.0 7.34e-01 100.0% 93.6%
7xlqD02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.82 78.0 7.73e-01 100.0% 95.8%
2nutB04 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.82 77.0 6.95e-01 97.8% 99.2%
1jeyB01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.82 78.0 7.14e-01 99.5% 98.7%
1lfaA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.80 75.0 7.56e-01 100.0% 98.4%
2x5nA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.79 72.0 7.35e-01 95.6% 98.9%
2xggB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.79 60.0 6.67e-01 90.2% 95.9%
1q0pA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.79 73.0 7.20e-01 96.7% 99.0%
1bmtA02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.74 51.0 5.43e-01 100.0% 79.7%
2lciA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.73 49.0 5.64e-01 100.0% 93.3%
2l69A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 49.0 5.57e-01 100.0% 97.0%
2b99C00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.68 48.0 5.22e-01 100.0% 85.5%
5t3uB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.68 41.0 4.75e-01 100.0% 81.2%
3d7nA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.65 53.0 5.65e-01 100.0% 98.1%
3e48A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 54.0 5.47e-01 98.9% 88.5%
1uyvA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.64 57.0 5.05e-01 95.1% 93.5%
1t3gB00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.64 50.0 5.42e-01 99.5% 98.7%
1u04A03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 44.0 4.50e-01 100.0% 72.5%
2bfwA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.63 48.0 4.80e-01 100.0% 76.2%
2f9iC00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.63 55.0 4.70e-01 94.5% 77.8%
4h08A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.63 58.0 5.61e-01 100.0% 89.5%
4j07A00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.63 45.0 4.87e-01 100.0% 88.2%
7ntgA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.63 45.0 4.61e-01 97.3% 75.7%
5vipB01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.62 55.0 5.11e-01 94.0% 90.7%
4rshA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.62 55.0 5.62e-01 98.4% 98.3%
3cb2B01 3.40.50.1440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain 0.61 57.0 4.98e-01 100.0% 94.3%
7vc6A02 3.40.50.1700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain 0.61 49.0 4.70e-01 97.8% 74.4%
1sqsA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.60 55.0 5.11e-01 100.0% 77.9%
3m1lA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 55.0 5.31e-01 100.0% 87.4%
4mj3B00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 55.0 4.67e-01 100.0% 85.1%
3ehdA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 49.0 5.23e-01 98.9% 99.4%
1ga6A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.59 55.0 4.34e-01 100.0% 74.0%
5mxpA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 54.0 4.63e-01 99.5% 90.1%
1b0zA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.59 45.0 4.56e-01 97.3% 78.8%
7o71E01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 54.0 4.44e-01 98.4% 62.0%
3rrxA02 3.40.50.1700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain 0.59 48.0 4.44e-01 99.5% 68.1%
1u9yA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 46.0 5.04e-01 96.7% 99.3%
4s1pA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.59 53.0 5.37e-01 97.3% 98.4%
5z2xA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 54.0 4.37e-01 100.0% 74.3%
4ay7A00 3.20.20.210 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.58 47.0 3.85e-01 85.2% 90.2%
5frdA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 53.0 4.75e-01 99.5% 89.8%
2ddxA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 48.0 3.99e-01 89.1% 95.4%
3do6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 52.0 4.36e-01 100.0% 82.3%
7arcP01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 52.0 4.58e-01 100.0% 75.3%
4qdiA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.57 52.0 4.82e-01 99.5% 84.7%
3p7zA01 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.56 40.0 4.21e-01 94.0% 82.4%
4ywrA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.55 51.0 4.74e-01 100.0% 91.7%
3mcaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 44.0 4.70e-01 100.0% 100.0%
3fokA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 48.0 4.13e-01 97.3% 88.1%
2x7vA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 43.0 3.72e-01 84.2% 88.8%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.53 43.0 3.54e-01 87.4% 64.0%
3k9gA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 47.0 4.40e-01 98.4% 98.7%
3llxA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.52 43.0 4.06e-01 86.9% 86.3%
1i60A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.52 43.0 3.75e-01 87.4% 86.6%
3ho6B00 3.40.50.11050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain 0.52 43.0 3.93e-01 88.5% 86.5%
4ltyA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.52 46.0 4.07e-01 100.0% 80.1%
1wohA00 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.52 47.0 3.99e-01 100.0% 90.4%
1gq6B00 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.51 46.0 3.97e-01 100.0% 92.4%
4kd6A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 46.0 4.41e-01 97.8% 86.0%
3cu2A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.50 43.0 4.03e-01 94.0% 92.7%
4nnqC01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.50 41.0 4.28e-01 96.2% 92.9%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4364695 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.92 85.0 8.49e-01 98.4% 93.5%
5074695 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.91 87.0 7.41e-01 98.9% 84.1%
5024101 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.90 86.0 8.24e-01 100.0% 88.7%
5018862 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.90 84.0 8.25e-01 100.0% 90.8%
3652682 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.90 84.0 7.85e-01 100.0% 81.9%
3288413 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.89 85.0 8.41e-01 99.5% 94.7%
4985872 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.89 85.0 8.18e-01 98.4% 99.0%
3855523 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.89 82.0 8.05e-01 100.0% 90.3%
3557980 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.89 86.0 8.39e-01 100.0% 96.9%
4519277 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.89 86.0 7.94e-01 100.0% 85.0%
3674873 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.89 86.0 8.10e-01 100.0% 94.3%
4969295 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.89 85.0 8.41e-01 99.5% 97.9%
3440234 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.88 85.0 7.66e-01 99.5% 80.4%
3777176 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.88 85.0 6.41e-01 100.0% 47.9%
3852148 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.88 82.0 7.89e-01 99.5% 86.3%
3531630 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.88 85.0 8.30e-01 100.0% 97.4%
4937442 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.88 76.0 7.86e-01 99.5% 95.3%
None — 0.88 85.0 7.87e-01 100.0% 88.2%
4997976 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.88 85.0 8.19e-01 100.0% 93.0%
3727059 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.88 84.0 7.75e-01 100.0% 91.6%
5062017 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.87 84.0 8.37e-01 98.9% 97.8%
3661688 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.87 84.0 8.01e-01 100.0% 88.7%
None — 0.87 84.0 7.80e-01 100.0% 93.6%
4010065 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.87 82.0 8.21e-01 100.0% 97.3%
3563018 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.87 84.0 4.76e-01 100.0% 13.2%
5038376 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.87 83.0 8.28e-01 98.9% 98.9%
3779727 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.87 80.0 7.81e-01 100.0% 89.7%
5052354 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.87 83.0 7.90e-01 100.0% 90.0%
5082008 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.87 83.0 8.16e-01 100.0% 95.4%
4970193 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.86 83.0 8.34e-01 100.0% 98.9%
4263032 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.86 80.0 8.01e-01 98.9% 95.1%
3210113 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.86 83.0 7.42e-01 100.0% 85.0%
5083686 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.86 82.0 7.95e-01 98.9% 92.0%
3368032 2006.1.6.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.86 81.0 7.92e-01 97.3% 92.3%
3343173 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.86 82.0 8.19e-01 98.4% 97.8%
3922583 2006.1.6.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.86 81.0 8.06e-01 100.0% 96.2%
3667891 2006.1.6.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.86 82.0 7.73e-01 98.4% 98.1%
4989225 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.86 83.0 8.02e-01 100.0% 95.5%
3290325 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.86 81.0 7.92e-01 98.4% 99.5%
3978017 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.86 82.0 5.83e-01 100.0% 38.5%
3875754 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.86 82.0 5.82e-01 100.0% 43.0%
3769836 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.86 82.0 7.65e-01 100.0% 85.0%
4637352 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 82.0 7.22e-01 100.0% 82.0%
3372593 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.85 80.0 7.82e-01 97.3% 99.0%
3207033 2006.1.6.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.85 78.0 7.91e-01 100.0% 97.2%
3464177 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.85 56.0 6.79e-01 97.3% 97.6%
4438398 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 82.0 8.01e-01 100.0% 94.9%
5039945 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 81.0 7.88e-01 100.0% 92.3%
4967940 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 81.0 7.29e-01 99.5% 83.7%
3930961 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 79.0 7.83e-01 100.0% 93.2%
4992645 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 76.0 7.80e-01 98.4% 97.1%
3961457 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.85 79.0 7.74e-01 97.3% 97.4%
3529481 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 79.0 7.86e-01 100.0% 93.7%
3620957 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 79.0 7.84e-01 100.0% 93.2%
3225572 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 78.0 7.77e-01 100.0% 94.1%
4587774 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 79.0 7.78e-01 100.0% 91.8%
5011082 2006.1.6.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.85 73.0 6.98e-01 95.6% 79.5%
3926566 2006.1.6.5 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 0.85 81.0 7.61e-01 100.0% 95.3%
4964793 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 72.0 7.36e-01 99.5% 92.0%
3846473 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.85 79.0 7.62e-01 99.5% 88.5%
3747853 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.85 80.0 7.88e-01 100.0% 94.2%
3938888 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.85 81.0 7.76e-01 100.0% 91.2%
2756280 2006.1.6.5 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 0.84 81.0 7.14e-01 100.0% 87.6%
4969900 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.84 76.0 7.84e-01 97.8% 97.7%
4985340 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.84 77.0 7.88e-01 98.9% 98.9%
3754042 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.84 81.0 7.68e-01 100.0% 87.6%
3437462 2006.1.6.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.84 77.0 7.67e-01 100.0% 93.5%
3536069 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.84 76.0 7.57e-01 100.0% 91.6%
3542501 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.84 80.0 7.30e-01 100.0% 85.8%
3747216 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.84 81.0 7.89e-01 100.0% 94.4%
4141558 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.84 80.0 7.95e-01 100.0% 96.3%
4113346 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.84 75.0 7.08e-01 93.4% 80.5%
3929025 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.84 79.0 7.40e-01 100.0% 83.7%
3962309 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.84 74.0 7.18e-01 93.4% 84.0%
None — 0.84 64.0 7.00e-01 87.4% 92.9%
3912064 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.84 80.0 7.76e-01 100.0% 91.5%
3236791 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.83 72.0 7.50e-01 99.5% 97.0%
434502 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.83 79.0 7.88e-01 98.4% 98.9%
4029870 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.83 80.0 7.55e-01 100.0% 96.7%
3927494 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.83 77.0 7.43e-01 100.0% 88.5%
136176 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.83 79.0 7.58e-01 100.0% 98.5%
3893938 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.82 79.0 7.56e-01 100.0% 93.7%
3753821 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.82 74.0 7.49e-01 100.0% 95.6%
5052615 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.82 77.0 7.36e-01 100.0% 88.1%
3550568 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.82 78.0 7.05e-01 100.0% 84.7%
3583362 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.81 69.0 7.06e-01 100.0% 92.0%
3235648 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.80 75.0 7.32e-01 97.8% 97.9%
3364267 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.80 63.0 6.85e-01 99.5% 96.1%
3796939 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.80 75.0 6.88e-01 100.0% 78.7%
3584099 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.79 75.0 7.25e-01 100.0% 93.0%
3972521 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.78 75.0 7.04e-01 100.0% 92.6%
3927341 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.78 74.0 7.40e-01 100.0% 98.9%
3331343 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.78 63.0 6.81e-01 98.9% 98.7%
3488216 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.77 67.0 6.82e-01 96.2% 92.8%
3933079 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.77 69.0 7.00e-01 93.4% 97.2%
5053391 2496.1.1.0 ↗ a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.76 45.0 5.41e-01 97.8% 86.4%
3583992 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.75 70.0 6.91e-01 100.0% 94.4%
3667603 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.72 67.0 6.60e-01 97.8% 97.4%
2754669 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.59 50.0 5.11e-01 100.0% 96.5%
5026134 2002.1.1.83 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.53 48.0 3.93e-01 100.0% 81.4%
D3 high residues 374-437_464-533
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.68 36.0 4.30e-01 96.3% 74.2%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.67 36.0 4.70e-01 94.0% 97.2%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.66 34.0 3.73e-01 89.6% 59.5%
5cemA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 29.0 3.82e-01 82.8% 79.5%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.62 30.0 3.70e-01 87.3% 75.3%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.61 35.0 4.41e-01 99.3% 97.4%
3mahA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 29.0 3.72e-01 88.8% 81.4%
2pa8D01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.60 31.0 3.69e-01 88.8% 72.7%
3lwsF02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 38.0 4.19e-01 100.0% 79.8%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.60 30.0 3.46e-01 85.1% 63.8%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.60 30.0 3.85e-01 86.6% 84.9%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 28.0 3.63e-01 82.8% 78.4%
2e29A01 3.30.70.2280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 28.0 3.65e-01 80.6% 78.9%
2mzwA01 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.59 27.0 3.35e-01 80.6% 69.7%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 35.0 3.75e-01 98.5% 68.4%
6gmhK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.58 32.0 3.41e-01 88.8% 60.0%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 34.0 3.77e-01 96.3% 71.2%
4m1xD00 3.30.1360.240 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.58 32.0 4.18e-01 94.8% 100.0%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.58 30.0 3.78e-01 86.6% 85.7%
5vnxA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 35.0 3.56e-01 100.0% 60.0%
2cdqA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 31.0 3.69e-01 89.6% 79.8%
2dt9A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 28.0 3.65e-01 89.6% 83.8%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 33.0 3.99e-01 89.6% 87.5%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.57 41.0 4.51e-01 94.0% 94.3%
5zneA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 28.0 3.48e-01 84.3% 79.5%
2p5vA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.56 28.0 3.39e-01 84.3% 72.6%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.56 31.0 3.95e-01 91.0% 96.0%
1mwyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 26.0 3.30e-01 89.6% 75.3%
3i4pA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.55 27.0 3.25e-01 83.6% 70.2%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 35.0 3.65e-01 99.3% 68.8%
4lq0A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 35.0 3.46e-01 97.8% 59.9%
1cc8A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 26.0 3.27e-01 83.6% 77.8%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 34.0 3.81e-01 100.0% 84.5%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 27.0 3.39e-01 84.3% 79.0%
2efpA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.54 28.0 3.16e-01 85.8% 64.3%
2qz8A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.54 25.0 3.14e-01 83.6% 70.4%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.53 31.0 3.55e-01 79.1% 78.1%
2kkhA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 25.0 3.14e-01 81.3% 73.3%
2gqqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.53 26.0 3.14e-01 83.6% 70.6%
7xhzA01 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.52 44.0 4.58e-01 94.8% 97.6%
2zzeA04 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.52 33.0 3.83e-01 94.0% 89.5%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.52 26.0 3.44e-01 86.6% 92.5%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.52 30.0 3.76e-01 91.8% 98.7%
3lcvB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 35.0 3.12e-01 71.6% 93.1%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5078580 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.66 33.0 3.89e-01 88.8% 67.4%
3382513 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.65 33.0 3.74e-01 89.6% 62.9%
3290652 306.2.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor 0.65 38.0 4.56e-01 96.3% 86.7%
5052687 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.63 31.0 4.02e-01 85.1% 82.7%
3603717 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.63 33.0 4.14e-01 96.3% 83.7%
4264348 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 30.0 3.93e-01 89.6% 80.0%
3367362 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 32.0 4.03e-01 88.8% 81.2%
3877589 327.16.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.63 25.0 3.60e-01 74.6% 80.0%
4968594 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.62 33.0 4.23e-01 94.0% 92.0%
3318862 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.62 32.0 3.87e-01 89.6% 76.5%
3725623 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.61 43.0 4.73e-01 100.0% 89.1%
4997781 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.60 35.0 3.93e-01 98.5% 73.3%
3805699 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.60 28.0 3.50e-01 84.3% 71.2%
4962382 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.59 32.0 3.54e-01 93.3% 62.7%
4999898 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 36.0 4.19e-01 99.3% 87.8%
3367922 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.59 33.0 3.83e-01 91.8% 75.8%
5014248 304.3.1.24 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › DUF3213 0.59 28.0 3.43e-01 84.3% 68.2%
3602137 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.59 35.0 4.13e-01 97.0% 84.2%
3802901 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 30.0 3.74e-01 88.8% 82.7%
3164749 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.58 29.0 3.46e-01 85.1% 68.9%
3367684 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.58 30.0 3.69e-01 88.8% 77.6%
5029252 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.58 36.0 3.81e-01 99.3% 67.5%
4509301 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.58 37.0 3.49e-01 98.5% 52.5%
3367441 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 33.0 3.75e-01 94.0% 73.7%
3959682 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 29.0 3.79e-01 87.3% 85.3%
4575751 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.58 33.0 3.95e-01 95.5% 84.4%
4205520 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 32.0 3.76e-01 90.3% 78.9%
3438815 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.57 32.0 3.79e-01 90.3% 82.4%
3325750 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.57 30.0 3.66e-01 88.8% 81.2%
3948181 304.54.1.0 ↗ a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.57 30.0 3.83e-01 90.3% 90.5%
3315331 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.57 30.0 3.74e-01 88.8% 83.7%
4971295 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.57 34.0 3.96e-01 96.3% 84.2%
3341034 304.8.1.57 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.57 32.0 3.47e-01 90.3% 65.5%
3923662 304.3.1.1 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.57 26.0 3.34e-01 80.6% 76.8%
3317095 304.9.1.122 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › bHLH-TF_ACT-like_plant 0.56 27.0 3.59e-01 81.3% 85.7%
4500602 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 31.0 3.63e-01 90.3% 75.8%
3824912 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.56 30.0 3.65e-01 89.6% 82.5%
3822351 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.56 32.0 3.65e-01 95.5% 76.8%
3817811 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 30.0 3.65e-01 91.0% 81.2%
5065094 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.55 33.0 3.48e-01 97.0% 64.0%
4274665 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.55 31.0 3.50e-01 91.8% 70.9%
3664175 304.3.1.1 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.54 27.0 3.22e-01 83.6% 69.4%
3285929 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.53 31.0 3.61e-01 91.8% 82.2%
5031915 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.53 32.0 3.76e-01 97.0% 91.8%
4372378 306.3.1.4 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › PFF1_C 0.53 30.0 3.61e-01 93.3% 85.9%
4298844 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.53 30.0 3.49e-01 92.5% 77.9%
5046913 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 34.0 3.78e-01 98.5% 84.5%
4653164 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.52 35.0 3.59e-01 100.0% 68.9%
3671608 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 31.0 3.35e-01 93.3% 69.1%
3659065 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.52 31.0 3.58e-01 88.8% 81.0%
4429744 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.51 30.0 3.46e-01 92.5% 80.0%
3412448 321.1.1.3 ↗ a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › ATP-gua_Ptrans 0.51 45.0 3.51e-01 97.8% 85.7%
2411782 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.51 33.0 3.26e-01 98.5% 59.5%
4545902 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 30.0 3.48e-01 92.5% 84.4%
3645785 304.8.1.57 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.51 30.0 3.27e-01 92.5% 70.5%
4030325 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.51 27.0 2.93e-01 87.3% 58.3%
3462522 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 30.0 3.09e-01 92.5% 60.0%
3223836 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.50 39.0 3.20e-01 83.6% 79.2%
3368757 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.50 30.0 3.41e-01 92.5% 81.1%
4092984 207.11.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.50 38.0 3.09e-01 79.9% 74.9%
3667551 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.50 30.0 3.57e-01 90.3% 87.8%
D4 medium residues 438-463_534-610
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3651891 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 27.0 3.10e-01 71.8% 60.8%
None — 0.55 39.0 3.02e-01 72.8% 64.5%
D5 medium residues 611-740
PDB
Domain cluster: rep: SR-VP_4-6_scaffold_141_2201553_prodigal-single.1__X__X__00124__D288-328_365-498
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yvsA02 3.30.70.2560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 21.0 3.07e-01 93.1% 74.6%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.53 17.0 2.38e-01 96.9% 47.6%
2iz4A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.51 20.0 3.32e-01 84.6% 100.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3897880 3935.1.1.1 ↗ extended segments › 4E-BP2 › 4E-BP2 › 4E-BP2 › eIF_4EBP 0.61 22.0 3.35e-01 86.2% 76.4%
3732152 331.1.1.5 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.57 25.0 3.13e-01 83.8% 66.3%
4957377 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.55 17.0 2.45e-01 86.2% 54.0%
4465353 3008.1.1.2 ↗ a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DUF5915 0.54 27.0 3.18e-01 89.2% 66.3%
3898566 192.5.1.14 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA 0.50 38.0 3.75e-01 79.2% 93.6%