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KT895374.1__ALN97946.1__Bp8pS_267__00267

Bact-Vir

KT895374.1__ALN97946.1__Bp8pS_267__00267

Identity

Accession:
KT895374 ↗
Kingdom:
phage

Quality

66.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 59-170
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4od4A02 1.20.120.1780 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase 0.58 38.0 3.75e-01 97.3% 61.3%
3himA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 40.0 3.39e-01 90.2% 43.2%
3udcA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 34.0 3.37e-01 77.7% 57.4%
3eupB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 41.0 3.40e-01 93.8% 45.0%
4kwaB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 39.0 3.26e-01 92.9% 44.3%
3pivA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.53 38.0 3.45e-01 75.0% 97.4%
3mvuA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.52 39.0 3.13e-01 79.5% 89.7%
7miqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 32.0 3.23e-01 95.5% 60.9%
1uddA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.51 39.0 3.16e-01 80.4% 87.4%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.51 34.0 3.46e-01 81.2% 69.4%
8sbeA02 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.51 45.0 3.79e-01 97.3% 89.8%
1jkwA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 42.0 3.60e-01 97.3% 56.8%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 34.0 4.06e-01 91.1% 100.0%
4id0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.50 38.0 3.84e-01 96.4% 78.6%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.50 35.0 3.49e-01 92.9% 69.0%
4uiqB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.50 38.0 3.46e-01 80.4% 73.9%
4od4A01 1.10.357.140 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase 0.50 42.0 3.75e-01 100.0% 64.1%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5070893 159.1.2.0 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related 0.68 47.0 4.83e-01 95.5% 75.2%
3216480 5001.1.1.84 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz 0.58 48.0 3.54e-01 90.2% 60.7%
3598985 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.56 42.0 3.74e-01 80.4% 95.2%
3229019 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.52 44.0 3.20e-01 92.9% 86.3%
3175967 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.52 44.0 3.55e-01 94.6% 68.9%
4490103 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.51 46.0 3.87e-01 99.1% 83.5%
3236433 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.51 46.0 3.79e-01 100.0% 81.0%
3706572 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 37.0 3.12e-01 78.6% 71.9%
3744639 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.50 46.0 3.62e-01 100.0% 73.8%
4350232 141.1.1.3 alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA 0.50 42.0 3.17e-01 93.8% 93.2%
D2 high residues 180-268
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wiyA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.73 50.0 3.22e-01 70.8% 70.6%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.65 33.0 3.86e-01 84.3% 69.4%
1t9kA01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.65 51.0 4.41e-01 84.3% 99.3%
4jndA02 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.65 50.0 3.46e-01 79.8% 29.9%
3fajA00 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.65 44.0 4.27e-01 70.8% 78.2%
1ng6A01 1.10.1510.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain 0.64 47.0 4.74e-01 79.8% 86.8%
1fouA01 1.10.246.30 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.63 39.0 4.26e-01 100.0% 75.7%
1tafB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.62 40.0 4.50e-01 87.6% 84.3%
6xpdA01 1.20.1510.10 Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain 0.61 47.0 3.63e-01 83.1% 53.5%
4ywoA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 43.0 3.30e-01 74.2% 72.2%
2k77A00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.59 41.0 3.49e-01 71.9% 61.4%
2kvdA02 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.59 36.0 4.15e-01 95.5% 93.1%
1k32A03 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.58 35.0 3.81e-01 74.2% 73.6%
2x8aA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.57 41.0 4.34e-01 75.3% 100.0%
6w6jD01 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.57 39.0 3.44e-01 70.8% 67.9%
2r44A03 1.10.8.80 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain 0.57 41.0 3.72e-01 74.2% 82.2%
2nr7A00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.57 40.0 3.14e-01 73.0% 90.2%
3b0cW00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.57 43.0 4.63e-01 98.9% 97.3%
4i5jA01 1.10.238.220 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.57 42.0 4.01e-01 79.8% 69.7%
1tafA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.56 41.0 4.63e-01 91.0% 100.0%
2daxA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.56 40.0 3.45e-01 75.3% 53.2%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.00e-01 78.7% 99.0%
1gvfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 42.0 2.96e-01 83.1% 90.2%
7xuxB01 1.10.3290.10 Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain 0.54 47.0 3.52e-01 100.0% 80.2%
1ifwA00 1.10.1900.10 Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein 0.54 39.0 3.88e-01 77.5% 73.9%
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.53 44.0 3.73e-01 94.4% 93.0%
2gf4A00 1.20.1270.110 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 0.53 37.0 3.81e-01 75.3% 77.3%
1z9hA03 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 36.0 3.11e-01 71.9% 62.9%
4zpxA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.52 43.0 4.25e-01 95.5% 88.0%
3nc3B00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 42.0 2.83e-01 93.3% 76.4%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 40.0 3.39e-01 85.4% 90.8%
4wzsB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.50 38.0 3.52e-01 92.1% 62.8%
1w5sA01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.50 40.0 4.10e-01 100.0% 89.8%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3247597 6164.1.1.1 alpha bundles › Bestrophin › Bestrophin › Bestrophin › Bestrophin 0.65 50.0 3.32e-01 83.1% 71.0%
3268369 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.64 49.0 4.87e-01 97.8% 77.9%
3736449 601.1.2.69 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › EOS1 0.64 45.0 3.55e-01 74.2% 51.6%
4134210 148.1.3.213 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_bind 0.62 40.0 4.45e-01 70.8% 82.9%
4672000 589.1.1.0 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain 0.62 55.0 4.35e-01 95.5% 66.9%
3638401 4095.1.1.1 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.62 40.0 3.36e-01 77.5% 37.4%
3837628 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.62 47.0 3.91e-01 82.0% 69.4%
4989650 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.62 47.0 4.77e-01 83.1% 98.9%
3479583 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.61 44.0 2.71e-01 75.3% 14.7%
5039692 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.61 42.0 4.12e-01 100.0% 66.3%
5029464 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.61 44.0 4.62e-01 75.3% 85.0%
3064123 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.61 42.0 4.64e-01 73.0% 88.9%
4028084 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 43.0 2.75e-01 74.2% 20.7%
4846312 1075.1.1.2 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › LptF_LptG 0.59 45.0 3.88e-01 79.8% 60.4%
3829766 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.59 46.0 3.16e-01 80.9% 48.1%
4483086 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 44.0 4.39e-01 79.8% 91.6%
3231521 108.1.1.27 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.59 40.0 3.84e-01 70.8% 73.3%
1871534 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.59 46.0 4.39e-01 85.4% 82.2%
3958742 129.1.1.11 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › ApbA_C 0.59 42.0 3.77e-01 74.2% 76.7%
4392993 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.58 40.0 4.30e-01 70.8% 98.7%
4932665 181.1.1.0 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.58 41.0 4.16e-01 97.8% 73.3%
3442812 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.58 42.0 4.28e-01 75.3% 91.8%
3693609 148.1.1.4 alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF 0.58 42.0 4.59e-01 96.6% 94.5%
3877790 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.58 43.0 4.49e-01 78.7% 94.0%
3605789 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.58 42.0 4.36e-01 76.4% 92.8%
3819132 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.57 41.0 4.09e-01 76.4% 72.6%
3589121 5076.2.1.2 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF975 0.56 44.0 3.30e-01 85.4% 56.1%
985418 148.1.1.16 alpha arrays › Histone-like › Histone-related › Histone › CENP-W 0.56 43.0 4.67e-01 100.0% 100.0%
3601341 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.55 35.0 3.91e-01 75.3% 81.4%
5072913 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.55 41.0 4.53e-01 98.9% 98.6%
4665138 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.55 47.0 4.32e-01 95.5% 73.9%
3595345 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.55 43.0 4.30e-01 98.9% 82.2%
4934144 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.54 39.0 4.15e-01 76.4% 90.0%
4040236 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.54 39.0 4.09e-01 74.2% 90.0%
5016180 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.53 40.0 4.06e-01 79.8% 88.9%
3638356 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.53 41.0 4.37e-01 95.5% 92.5%
3280319 191.1.1.55 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_15 0.53 41.0 3.66e-01 84.3% 85.4%
5026918 148.1.3.17 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.53 40.0 3.92e-01 80.9% 72.0%
3551855 148.1.1.12 alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP 0.53 41.0 4.37e-01 96.6% 92.5%
3942637 148.1.3.232 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF3418 0.53 44.0 3.27e-01 92.1% 53.8%
3611610 1075.5.1.5 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Rft-1 0.52 39.0 2.89e-01 82.0% 84.8%
3836893 148.1.1.12 alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP 0.51 40.0 4.24e-01 96.6% 93.8%
5070824 140.1.1.7 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.50 43.0 3.68e-01 94.4% 88.3%
4651060 633.22.1.0 alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) 0.50 40.0 3.32e-01 87.6% 67.3%