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KT919973.1__ALP47463.1__phiST2_0077__00077
Bact-VirKT919973.1__ALP47463.1__phiST2_0077__00077
Identity
- Accession:
- KT919973 ↗
- Kingdom:
- phage
Quality
60.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Schizotequatrovirus›
Vibrio_phage_phi-ST2
TaxID: 1747714
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-83
D2
high
residues 101-168
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2raeA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 43.0 | 5.15e-01 | 97.1% | 100.0% |
| 2ch5B02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.68 | 47.0 | 3.34e-01 | 72.1% | 47.0% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.68 | 44.0 | 3.23e-01 | 100.0% | 23.8% |
| 3dteA01 | 1.10.10.2910 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 55.0 | 4.67e-01 | 100.0% | 96.6% |
| 4fqgB03 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.63 | 52.0 | 5.31e-01 | 100.0% | 97.0% |
| 4it1B01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 50.0 | 3.93e-01 | 100.0% | 57.5% |
| 4nk2A01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 50.0 | 3.94e-01 | 98.5% | 80.8% |
| 3busB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 42.0 | 2.92e-01 | 82.4% | 87.2% |
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.55 | 40.0 | 3.21e-01 | 79.4% | 48.6% |
| 2vk9A04 | 1.10.274.80 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.55 | 42.0 | 3.77e-01 | 100.0% | 57.7% |
| 3m03B00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 41.0 | 3.76e-01 | 91.2% | 60.0% |
| 2aplA02 | 1.10.8.340 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.53 | 38.0 | 3.59e-01 | 76.5% | 66.7% |
| 3v53E00 | 1.20.1390.10 | Mainly Alpha › Up-down Bundle › PWI domain › PWI domain | 0.52 | 37.0 | 3.31e-01 | 76.5% | 72.5% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 43.0 | 4.18e-01 | 97.1% | 89.9% |
| 2vvwA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.51 | 40.0 | 3.24e-01 | 100.0% | 42.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3249906 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.64 | 52.0 | 4.91e-01 | 100.0% | 74.1% |
| 3249566 | 135.1.1.1 ↗ | alpha arrays › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › Transducin (alpha subunit), insertion domain › G-alpha | 0.62 | 49.0 | 4.12e-01 | 88.2% | 71.7% |
| 3998882 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 39.0 | 3.66e-01 | 100.0% | 55.3% |
| 4291557 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.57 | 50.0 | 3.78e-01 | 100.0% | 57.1% |
| 3479759 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 45.0 | 4.39e-01 | 100.0% | 80.0% |
| 3717122 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 48.0 | 4.10e-01 | 100.0% | 84.2% |
| 3607719 | 633.24.1.0 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain | 0.56 | 48.0 | 4.52e-01 | 100.0% | 89.4% |
| 3000229 | 3579.1.1.1 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › Oxidored_q3 | 0.54 | 38.0 | 3.74e-01 | 75.0% | 80.0% |
| 3629324 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.54 | 44.0 | 3.99e-01 | 100.0% | 64.8% |
| 3820263 | 7016.1.1.0 ↗ | extended segments › Palmitoyltransferase DHHC C-terminal domain › Palmitoyltransferase DHHC C-terminal domain › Palmitoyltransferase DHHC C-terminal domain | 0.53 | 40.0 | 3.29e-01 | 86.8% | 85.5% |
| 3588587 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.53 | 43.0 | 3.75e-01 | 95.6% | 63.5% |
| 3859287 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.53 | 38.0 | 3.67e-01 | 86.8% | 67.5% |
| 5058890 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.52 | 36.0 | 3.57e-01 | 75.0% | 100.0% |
| 3468262 | 207.1.1.103 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_R13L1-DRL21 | 0.51 | 42.0 | 2.48e-01 | 94.1% | 11.2% |
| 3685820 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.50 | 38.0 | 2.87e-01 | 80.9% | 36.1% |