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KT919973.1__ALP47654.1__phiST2_0186__00186
Bact-VirKT919973.1__ALP47654.1__phiST2_0186__00186
Identity
- Accession:
- KT919973 ↗
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Schizotequatrovirus›
Vibrio_phage_phi-ST2
TaxID: 1747714
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-76
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.85 | 65.0 | 5.53e-01 | 82.4% | 51.3% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.79 | 54.0 | 4.46e-01 | 70.3% | 86.5% |
| 7dswA01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.79 | 56.0 | 3.44e-01 | 85.1% | 13.6% |
| 3nyjA00 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.74 | 64.0 | 4.85e-01 | 97.3% | 40.9% |
| 1vp7A00 | 1.10.287.1040 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit | 0.73 | 56.0 | 5.86e-01 | 81.1% | 88.2% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.73 | 48.0 | 4.13e-01 | 79.7% | 42.7% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 44.0 | 3.86e-01 | 71.6% | 49.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4300897 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.88 | 82.0 | 6.64e-01 | 100.0% | 57.7% |
| 3408277 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.86 | 80.0 | 6.73e-01 | 98.6% | 64.3% |
| 5020701 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.84 | 79.0 | 5.36e-01 | 100.0% | 59.1% |
| 3766956 | 622.4.1.22 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › FAM186A-B_N | 0.84 | 60.0 | 5.00e-01 | 74.3% | 47.5% |
| 3276975 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.82 | 68.0 | 5.50e-01 | 91.9% | 48.9% |
| 4978274 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.79 | 57.0 | 4.87e-01 | 75.7% | 50.4% |
| 4052085 | 150.8.1.4 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › Hydro_N_hd | 0.78 | 71.0 | 5.05e-01 | 100.0% | 40.0% |
| 3742731 | 7013.1.1.1 ↗ | alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 | 0.76 | 59.0 | 4.59e-01 | 82.4% | 40.6% |
| 4166693 | 7013.1.1.1 ↗ | alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 | 0.76 | 59.0 | 4.36e-01 | 82.4% | 33.0% |
| 3805159 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.74 | 63.0 | 5.70e-01 | 93.2% | 70.0% |
| 4957532 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.71 | 51.0 | 4.18e-01 | 74.3% | 56.9% |
| 4018370 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.69 | 62.0 | 5.16e-01 | 100.0% | 58.5% |
| 4387547 | 7013.1.1.1 ↗ | alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 | 0.69 | 61.0 | 4.50e-01 | 97.3% | 68.4% |
| 5070319 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 40.0 | 3.18e-01 | 71.6% | 29.7% |
| 4453179 | 7013.1.1.1 ↗ | alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 | 0.68 | 60.0 | 4.36e-01 | 97.3% | 49.7% |
| 4397665 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.67 | 48.0 | 4.33e-01 | 75.7% | 64.0% |