←Back to structures

KT932418.1__ALM62075.1__qdvp001_083__00083

Bact-Vir

KT932418.1__ALM62075.1__qdvp001_083__00083

Identity

Accession:
KT932418 ↗
Kingdom:
phage

Quality

80.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_qdvp001

TaxID: 1003177

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 391-471
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6kbrC00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.63 32.0 3.75e-01 75.3% 70.9%
6jzaA00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.54 29.0 2.98e-01 75.3% 49.4%
1mw7A03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.51 40.0 4.18e-01 85.2% 97.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5003386 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.57 43.0 3.80e-01 98.8% 55.0%
3641047 102.1.1.4 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc 0.56 40.0 4.08e-01 76.5% 100.0%
3740975 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.55 36.0 4.04e-01 82.7% 90.0%
D2 medium residues 1-77
PDB
Domain cluster: rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00232__D1-65
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4flnA02 3.20.190.20 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › 0.58 41.0 3.36e-01 75.3% 79.6%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 41.0 3.60e-01 79.2% 77.3%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 37.0 3.86e-01 70.1% 75.3%
2eo6A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 36.0 3.25e-01 71.4% 68.5%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.52 35.0 3.67e-01 70.1% 79.2%
2x8nA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.52 37.0 3.48e-01 76.6% 86.6%
2uz8A01 3.40.30.90 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.51 34.0 3.87e-01 70.1% 98.1%
1aisA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.50 39.0 3.80e-01 85.7% 93.1%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4072405 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.68 50.0 5.10e-01 77.9% 97.3%
4186983 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.68 50.0 5.07e-01 77.9% 97.3%
2775138 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 49.0 3.94e-01 88.3% 79.5%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.60 47.0 3.37e-01 83.1% 35.7%
3518475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.60e-01 77.9% 98.6%
3523979 604.12.1.118 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF4537 0.57 42.0 4.75e-01 80.5% 100.0%
3793656 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.57 44.0 3.62e-01 84.4% 73.8%
5065013 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 41.0 3.25e-01 77.9% 79.4%
3340222 3131.1.1.3 ↗ a+b two layers › FYR domain › FYR domain › FYR domain › FYRC 0.55 42.0 3.65e-01 83.1% 53.6%
3926120 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.55 45.0 3.70e-01 90.9% 77.2%
5054192 802.1.1.0 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.54 37.0 3.39e-01 70.1% 85.0%
3183076 7515.1.1.2 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase 0.50 38.0 2.40e-01 88.3% 82.5%
D3 medium residues 124-178
PDB
Domain cluster: representative
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 58.0 5.63e-01 78.2% 83.9%
6jy5B00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.79 53.0 4.66e-01 70.9% 89.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.75 56.0 5.35e-01 80.0% 92.1%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.73 57.0 5.04e-01 92.7% 58.7%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 57.0 5.51e-01 90.9% 85.5%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 48.0 4.73e-01 74.5% 67.2%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 49.0 5.02e-01 76.4% 96.3%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 4.93e-01 85.5% 73.2%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 52.0 4.09e-01 85.5% 79.8%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 53.0 4.83e-01 85.5% 72.2%
7c9rH01 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.66 57.0 4.14e-01 96.4% 45.9%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.65 49.0 5.15e-01 80.0% 93.8%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 45.0 4.73e-01 72.7% 100.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 54.0 5.32e-01 94.5% 93.2%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 43.0 4.05e-01 72.7% 56.7%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 42.0 3.98e-01 72.7% 57.6%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 46.0 4.31e-01 80.0% 81.4%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 4.98e-01 98.2% 90.0%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.62 46.0 4.61e-01 81.8% 92.9%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 45.0 4.28e-01 80.0% 92.5%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.61 50.0 3.64e-01 98.2% 32.8%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 50.0 3.13e-01 100.0% 38.9%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 47.0 2.81e-01 85.5% 36.6%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 50.0 3.20e-01 100.0% 28.6%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 42.0 4.00e-01 74.5% 62.1%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.60 41.0 4.14e-01 72.7% 87.5%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 47.0 3.32e-01 85.5% 42.9%
3ayjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 46.0 2.84e-01 85.5% 46.2%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 4.72e-01 87.3% 92.0%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 40.0 3.82e-01 70.9% 59.1%
1uirA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.59 41.0 4.24e-01 74.5% 96.2%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 48.0 4.21e-01 100.0% 67.0%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 40.0 3.80e-01 72.7% 58.2%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 40.0 3.83e-01 72.7% 64.1%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.57 47.0 4.19e-01 100.0% 83.1%
1zswA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 47.0 3.60e-01 100.0% 47.3%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.57 39.0 3.82e-01 74.5% 79.7%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.57 39.0 3.99e-01 72.7% 94.2%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 42.0 4.02e-01 81.8% 87.9%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 46.0 3.43e-01 94.5% 61.0%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 38.0 3.59e-01 72.7% 58.2%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 40.0 3.90e-01 81.8% 92.2%
5j60B02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 44.0 3.52e-01 92.7% 84.2%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.54 39.0 3.55e-01 80.0% 74.4%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 44.0 2.68e-01 90.9% 37.5%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.54 36.0 2.63e-01 90.9% 24.2%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.54 39.0 3.84e-01 81.8% 91.5%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 3.49e-01 100.0% 74.2%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 2.71e-01 100.0% 34.8%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 42.0 3.40e-01 92.7% 86.9%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.53 43.0 3.38e-01 100.0% 53.9%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 36.0 3.46e-01 72.7% 80.6%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.53 36.0 3.76e-01 74.5% 98.0%
1rypA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 44.0 2.96e-01 100.0% 55.1%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 42.0 3.34e-01 92.7% 87.0%
3ab1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 3.34e-01 92.7% 85.7%
3n4eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 35.0 2.99e-01 70.9% 88.5%
5fmgG00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 44.0 2.99e-01 100.0% 61.6%
6muwN00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 43.0 2.99e-01 100.0% 69.6%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.51 39.0 3.83e-01 89.1% 92.2%
1ryp100 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 41.0 2.87e-01 100.0% 59.5%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3742938 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.78 57.0 5.43e-01 78.2% 80.0%
3929809 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.77 50.0 5.64e-01 70.9% 92.5%
3941152 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.75 50.0 4.74e-01 70.9% 58.5%
3939881 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 49.0 4.47e-01 72.7% 50.7%
1821014 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.74 60.0 5.74e-01 89.1% 95.3%
3228213 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.73 49.0 4.63e-01 70.9% 58.5%
4027502 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 63.0 5.96e-01 96.4% 92.3%
3790904 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.72 47.0 4.57e-01 70.9% 60.0%
3591209 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 49.0 4.80e-01 70.9% 65.0%
4605602 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 56.0 5.28e-01 83.6% 78.5%
5043533 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.58e-01 90.9% 93.8%
4195627 4.6.1.6 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.71 56.0 5.34e-01 87.3% 92.3%
4206684 4.6.1.6 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.71 59.0 5.59e-01 92.7% 98.5%
3703749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 52.0 4.97e-01 80.0% 75.4%
3701345 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 5.17e-01 92.7% 96.2%
3917372 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.70 59.0 5.35e-01 94.5% 80.0%
4376886 4.1.1.241 ↗ beta barrels › SH3 › SH3 › SH3 › NifZ 0.69 60.0 5.32e-01 98.2% 93.8%
3933293 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 47.0 4.68e-01 72.7% 67.2%
3687350 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 49.0 4.97e-01 76.4% 87.3%
4629735 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 52.0 4.93e-01 81.8% 78.5%
3741680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.37e-01 85.5% 94.5%
3767452 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 4.28e-01 87.3% 86.4%
4186983 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.68 59.0 5.36e-01 100.0% 90.7%
4966163 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.22e-01 98.2% 70.7%
3597255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 51.0 4.41e-01 81.8% 58.8%
3396897 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 50.0 4.79e-01 80.0% 90.5%
4072405 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.67 58.0 5.30e-01 100.0% 90.7%
3591224 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 50.0 5.18e-01 81.8% 96.0%
4024629 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 45.0 5.13e-01 72.7% 97.5%
3993946 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 45.0 5.11e-01 70.9% 97.5%
4161673 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.66 55.0 4.82e-01 94.5% 64.7%
5073368 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 4.96e-01 90.9% 78.6%
4271974 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.66 54.0 5.16e-01 90.9% 82.8%
3563220 4.1.1.220 ↗ beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor 0.65 54.0 4.78e-01 92.7% 76.2%
3912274 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.64 43.0 4.02e-01 72.7% 55.7%
3586469 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.64 55.0 4.77e-01 96.4% 71.8%
3485745 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 45.0 4.43e-01 76.4% 91.7%
4093354 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 47.0 4.34e-01 80.0% 90.0%
3894564 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.63 44.0 3.90e-01 74.5% 49.4%
1566284 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.62 48.0 2.83e-01 85.5% 72.8%
3519934 5.1.4.48 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 0.62 51.0 3.46e-01 98.2% 50.9%
3660358 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 5.01e-01 92.7% 90.0%
3508714 295.1.1.29 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ 0.60 42.0 3.05e-01 72.7% 73.8%
3966949 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.60 50.0 4.35e-01 96.4% 64.4%
3918019 209.1.1.1 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.60 50.0 3.67e-01 94.5% 67.3%
3471779 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 47.0 2.88e-01 94.5% 34.5%
3189510 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 48.0 4.74e-01 92.7% 95.0%
3178590 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.59 47.0 2.85e-01 92.7% 25.6%
3557162 5.1.5.52 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › EMC1_C 0.58 50.0 2.93e-01 100.0% 34.7%
3668377 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 48.0 2.84e-01 98.2% 14.3%
4013660 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.58 40.0 2.41e-01 72.7% 23.5%
1094905 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.58 40.0 3.75e-01 72.7% 57.1%
3622284 3075.1.1.0 ↗ a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA 0.58 47.0 2.85e-01 96.4% 16.2%
3317374 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 47.0 3.03e-01 98.2% 25.7%
3183716 5.1.4.414 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Lgl_C 0.57 45.0 2.53e-01 96.4% 9.7%
4049072 2.4.1.6 ↗ beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.57 44.0 3.57e-01 85.5% 55.5%
3939988 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 38.0 3.01e-01 70.9% 32.0%
3994731 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.57 44.0 3.10e-01 85.5% 47.8%
2897014 3699.1.1.1 ↗ beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.56 39.0 3.81e-01 72.7% 81.7%
3263687 5.1.4.276 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_2nd 0.56 46.0 2.84e-01 92.7% 20.0%
3639196 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.56 42.0 4.40e-01 85.5% 100.0%
3518786 509.1.1.1 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH 0.55 45.0 3.81e-01 100.0% 51.4%
3684111 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.55 43.0 2.80e-01 89.1% 45.2%
4013323 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 43.0 2.71e-01 94.5% 28.8%
4114201 3699.1.1.1 ↗ beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.55 43.0 4.13e-01 89.1% 86.2%
2055300 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.55 42.0 3.66e-01 85.5% 68.5%
4303869 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.55 37.0 3.21e-01 70.9% 88.9%
3209968 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 45.0 2.78e-01 100.0% 22.0%
3272228 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 45.0 2.96e-01 100.0% 27.4%
3361883 1205.2.1.1 ↗ a+b two layers › C-terminal domain of CdiA toxin › C-terminal domain of P. aeruginosa CdiA › C-terminal domain of P. aeruginosa CdiA › PF31217 0.54 37.0 3.21e-01 100.0% 43.2%
4608279 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 40.0 3.91e-01 96.4% 95.4%
3614397 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.50 36.0 2.72e-01 80.0% 60.0%
D4 medium residues 196-250
PDB
Domain cluster: rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00232__D1-65
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 53.0 5.17e-01 70.9% 95.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 54.0 5.19e-01 72.7% 87.1%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 55.0 4.84e-01 76.4% 76.9%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.75 62.0 4.21e-01 92.7% 33.2%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 50.0 4.65e-01 70.9% 81.4%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 49.0 4.83e-01 72.7% 91.7%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 5.15e-01 87.3% 94.3%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.69 48.0 4.53e-01 72.7% 71.2%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 48.0 4.54e-01 72.7% 86.4%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 48.0 4.94e-01 74.5% 96.2%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 53.0 4.65e-01 87.3% 77.9%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.68 48.0 3.95e-01 76.4% 97.1%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 5.16e-01 78.2% 96.0%
3e1tA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 47.0 3.04e-01 76.4% 34.9%
1dkiC01 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.65 52.0 3.60e-01 90.9% 35.1%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 51.0 4.49e-01 92.7% 63.5%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 44.0 4.60e-01 72.7% 100.0%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 43.0 3.93e-01 72.7% 58.9%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 52.0 4.15e-01 100.0% 52.1%
2pm9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 51.0 3.21e-01 98.2% 24.2%
4xxfA00 3.40.225.10 Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain 0.61 50.0 3.40e-01 100.0% 70.3%
5j60B02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 43.0 3.47e-01 78.2% 83.3%
2ediA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.60 49.0 3.69e-01 100.0% 68.1%
1s68A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.59 42.0 3.45e-01 78.2% 61.9%
5x68A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 43.0 2.65e-01 78.2% 41.4%
5nahA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 42.0 2.61e-01 78.2% 41.2%
7sulB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 3.06e-01 96.4% 22.4%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 41.0 3.98e-01 76.4% 80.0%
2pt7C01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.58 40.0 3.30e-01 76.4% 37.7%
4mtsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 41.0 3.27e-01 78.2% 36.4%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 41.0 3.39e-01 78.2% 72.0%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 41.0 3.79e-01 78.2% 68.9%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.57 44.0 3.80e-01 89.1% 97.9%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 3.76e-01 78.2% 86.3%
3ab1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 42.0 3.33e-01 83.6% 84.9%
3b0xA03 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.56 39.0 3.27e-01 78.2% 39.0%
2khjA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 39.0 3.43e-01 76.4% 58.4%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 44.0 3.66e-01 90.9% 92.3%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 44.0 3.76e-01 90.9% 91.6%
4wjsA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 2.86e-01 100.0% 20.3%
2d0bA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.54 41.0 3.58e-01 83.6% 62.9%
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 41.0 3.78e-01 83.6% 84.9%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.80e-01 100.0% 22.1%
6muwH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 40.0 2.90e-01 87.3% 66.3%
1whzA00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.53 41.0 3.96e-01 92.7% 81.2%
1iruI00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 41.0 2.86e-01 90.9% 59.5%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 3.11e-01 83.6% 93.2%
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 36.0 3.09e-01 76.4% 43.6%
2ei0A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 42.0 3.22e-01 100.0% 37.5%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 3.26e-01 96.4% 63.6%
2arzA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 37.0 2.82e-01 83.6% 72.0%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.50 40.0 2.95e-01 100.0% 75.0%
3lm4A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.50 41.0 3.24e-01 100.0% 40.4%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3211367 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 57.0 4.75e-01 70.9% 64.4%
2512682 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.83 52.0 5.20e-01 72.7% 63.6%
3579728 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.82 57.0 5.23e-01 72.7% 81.4%
3776390 4.1.1.91 ↗ beta barrels › SH3 › SH3 › SH3 › hSH3 0.82 56.0 4.27e-01 70.9% 48.7%
3243188 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.82 65.0 5.81e-01 85.5% 96.0%
3841524 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.81 55.0 4.29e-01 70.9% 51.8%
157818 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.81 55.0 4.57e-01 70.9% 62.6%
3930456 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 61.0 5.72e-01 80.0% 86.2%
3900733 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.79 55.0 5.04e-01 72.7% 81.4%
3482676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 55.0 5.37e-01 72.7% 95.0%
3840052 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 54.0 6.20e-01 70.9% 100.0%
3554995 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 54.0 4.91e-01 70.9% 80.0%
4134876 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.79 53.0 3.71e-01 70.9% 33.9%
3491137 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 54.0 5.29e-01 72.7% 95.0%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 54.0 5.25e-01 72.7% 91.7%
3616769 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.77 58.0 4.76e-01 80.0% 62.1%
3581817 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.75 60.0 5.63e-01 85.5% 93.8%
3494765 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.75 52.0 3.41e-01 72.7% 49.1%
3913637 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.74 62.0 5.25e-01 92.7% 74.4%
3247995 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 57.0 5.22e-01 81.8% 75.7%
3622389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 59.0 5.54e-01 85.5% 83.1%
4000622 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.74 58.0 4.48e-01 85.5% 50.8%
3794500 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.74 58.0 3.98e-01 85.5% 32.4%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 59.0 4.89e-01 87.3% 58.9%
5081654 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.73 60.0 5.85e-01 89.1% 88.3%
3701382 312.1.1.8 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › DcpS_C 0.73 54.0 3.46e-01 80.0% 95.3%
3246255 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 50.0 4.64e-01 72.7% 78.6%
3372822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.04e-01 85.5% 84.0%
4092289 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.70 50.0 4.75e-01 76.4% 73.8%
4402425 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.69 50.0 4.61e-01 76.4% 68.6%
5008972 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.68 53.0 3.09e-01 85.5% 15.2%
4279317 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.68 53.0 3.09e-01 85.5% 15.2%
403788 4.1.1.100 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_11 0.68 54.0 5.23e-01 87.3% 93.7%
3961546 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 53.0 5.05e-01 87.3% 81.5%
4556449 6020.1.1.1 ↗ a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.67 57.0 4.40e-01 100.0% 48.1%
3623333 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.67 48.0 4.13e-01 76.4% 58.0%
4085433 6020.1.1.1 ↗ a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.67 55.0 4.40e-01 96.4% 53.3%
4269801 6020.1.1.1 ↗ a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.66 54.0 4.19e-01 94.5% 48.5%
4026678 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 52.0 4.89e-01 89.1% 78.6%
4182859 6020.1.1.1 ↗ a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.66 53.0 4.22e-01 94.5% 50.4%
3589344 6020.1.1.1 ↗ a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.66 55.0 4.24e-01 96.4% 49.2%
3274510 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.66 47.0 4.28e-01 76.4% 77.3%
4409580 6020.1.1.1 ↗ a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.66 55.0 4.28e-01 100.0% 47.4%
4133617 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 45.0 2.77e-01 72.7% 75.7%
3723120 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.65 48.0 3.58e-01 78.2% 37.8%
4210622 6020.1.1.1 ↗ a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.65 55.0 4.34e-01 100.0% 51.2%
4526502 6020.1.1.1 ↗ a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.65 54.0 4.23e-01 96.4% 51.2%
4932588 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.65 51.0 4.90e-01 89.1% 86.2%
3490807 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.65 46.0 3.30e-01 76.4% 34.3%
4357648 6020.1.1.1 ↗ a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C 0.65 55.0 4.31e-01 100.0% 52.8%
4501678 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.64 46.0 4.38e-01 76.4% 66.2%
None — 0.64 48.0 2.94e-01 81.8% 78.8%
4448208 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.63 45.0 4.46e-01 76.4% 75.0%
4223146 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.63 45.0 4.44e-01 76.4% 88.3%
3571487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.76e-01 92.7% 91.8%
3243143 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.96e-01 92.7% 90.8%
4887492 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 51.0 3.33e-01 96.4% 26.2%
4653384 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.63 45.0 4.42e-01 76.4% 88.3%
4549995 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.63 46.0 2.88e-01 80.0% 80.0%
3404643 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.71e-01 92.7% 95.7%
3586112 5.1.5.134 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_EIPR1 0.61 51.0 3.33e-01 96.4% 28.2%
4185603 2.1.1.63 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_2 0.61 43.0 4.04e-01 76.4% 67.1%
3500438 5.1.4.277 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 0.61 51.0 3.38e-01 96.4% 30.8%
3496646 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.61 51.0 3.17e-01 100.0% 30.3%
4683204 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.60 43.0 3.51e-01 76.4% 44.8%
3471779 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 52.0 3.13e-01 100.0% 32.6%
4475219 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.60 50.0 3.86e-01 94.5% 61.5%
3709449 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 50.0 3.17e-01 94.5% 22.7%
4010577 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.60 43.0 4.02e-01 76.4% 75.7%
3722737 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 41.0 2.97e-01 72.7% 26.1%
4043931 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.59 43.0 4.21e-01 78.2% 71.7%
3701175 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 50.0 3.19e-01 100.0% 23.3%
4015023 209.1.1.0 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like 0.59 44.0 3.57e-01 85.5% 64.2%
3713034 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 49.0 2.97e-01 98.2% 19.5%
4224155 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.59 42.0 3.93e-01 76.4% 64.3%
4998989 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.58 44.0 2.85e-01 83.6% 19.3%
3426962 5.1.2.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 0.58 48.0 3.38e-01 96.4% 42.6%
4881577 5.1.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 0.56 46.0 3.06e-01 96.4% 29.2%
3687406 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 45.0 4.00e-01 92.7% 95.2%
5014724 295.1.1.51 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.55 40.0 3.41e-01 87.3% 44.0%
4950628 3740.1.1.4 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.55 43.0 2.75e-01 87.3% 20.4%
3418933 2004.1.1.414 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 0.54 45.0 3.15e-01 98.2% 79.0%
3995153 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 38.0 3.14e-01 74.5% 44.8%
6450 4023.1.1.2 ↗ a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › Helic-prim_T7_N 0.53 40.0 3.69e-01 83.6% 83.6%
3407797 3246.1.1.7 ↗ few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Adt-1 0.53 37.0 3.07e-01 78.2% 57.4%
3716765 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 43.0 2.51e-01 96.4% 15.3%
3333777 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 42.0 2.81e-01 96.4% 23.5%
D5 medium residues 251-309
PDB
Domain cluster: representative