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KT934943.1__ALM02595.1__KB57_208__00208

Bact-Vir

KT934943.1__ALM02595.1__KB57_208__00208

Identity

Accession:
KT934943 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-60
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23776.2 best DUF7170 102.1 1.70e-29 100.0% 98.0%
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.75 57.0 3.95e-01 83.7% 48.5%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.73 60.0 5.17e-01 95.9% 85.4%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.69 52.0 4.78e-01 83.7% 71.2%
2faoA01 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.68 57.0 3.62e-01 100.0% 68.8%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 57.0 4.82e-01 98.0% 63.5%
2xwxA03 2.60.40.2550 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 58.0 4.65e-01 100.0% 62.2%
3m1cA04 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.65 55.0 4.13e-01 100.0% 48.5%
2pjyC00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.64 51.0 4.43e-01 89.8% 69.6%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.64 55.0 4.35e-01 100.0% 56.6%
4ecnA01 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.63 55.0 4.36e-01 100.0% 62.1%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 52.0 4.09e-01 93.9% 81.5%
2xqyA03 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.63 54.0 4.02e-01 100.0% 42.9%
2b5iC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 54.0 4.42e-01 100.0% 64.6%
2yuxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 53.0 4.22e-01 100.0% 54.6%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 53.0 4.13e-01 100.0% 56.9%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.62 48.0 3.59e-01 89.8% 95.6%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 51.0 3.49e-01 100.0% 31.5%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.62 49.0 4.22e-01 100.0% 97.8%
2f4nA01 3.40.50.10790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal 0.61 51.0 3.68e-01 95.9% 43.2%
3gqsB00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.61 45.0 3.68e-01 83.7% 99.0%
1yrrA01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.61 43.0 3.50e-01 100.0% 40.2%
5z06B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 50.0 4.23e-01 100.0% 63.0%
3l2pA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.60 51.0 4.62e-01 100.0% 74.6%
3ffyA00 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.60 49.0 3.90e-01 98.0% 75.9%
7y6oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 50.0 4.13e-01 100.0% 62.9%
6jkuA01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.60 42.0 3.38e-01 100.0% 37.8%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.59 49.0 4.37e-01 100.0% 72.4%
1ywlA00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.58 46.0 3.75e-01 89.8% 85.4%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.58 50.0 4.12e-01 100.0% 96.8%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 46.0 3.80e-01 98.0% 62.7%
4d05A01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.57 47.0 4.22e-01 100.0% 75.0%
3gl3D00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 41.0 3.08e-01 79.6% 44.5%
4bwsF00 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.56 45.0 4.21e-01 100.0% 77.6%
6tr4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 44.0 3.39e-01 93.9% 42.7%
7k7jA02 2.60.40.1770 Mainly Beta › Sandwich › Immunoglobulin-like › ephrin a2 ectodomain 0.55 39.0 3.61e-01 100.0% 58.1%
4jxuA02 3.20.10.10 Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 0.55 46.0 3.32e-01 100.0% 51.9%
1es6A02 2.60.510.10 Mainly Beta › Sandwich › EV matrix protein fold › EV matrix protein 0.55 40.0 3.37e-01 85.7% 97.0%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 39.0 3.14e-01 83.7% 34.7%
2qx2A00 3.10.570.10 Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain 0.54 43.0 2.70e-01 95.9% 58.8%
1s4dE02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.54 39.0 2.99e-01 85.7% 31.7%
6vt2A03 2.60.40.4140 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.42e-01 100.0% 68.3%
5eliA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 3.43e-01 100.0% 70.5%
1r4kA01 2.170.260.10 Mainly Beta › Beta Complex › paz domain › paz domain 0.52 40.0 3.03e-01 87.8% 65.9%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 38.0 2.85e-01 87.8% 45.6%
5t89Y06 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.62e-01 100.0% 73.9%
6hmjA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 40.0 3.19e-01 85.7% 96.2%
3ihgA03 3.40.30.120 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.52 46.0 3.29e-01 100.0% 48.6%
1vemA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.50e-01 100.0% 66.0%
1l1lA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.51 36.0 2.16e-01 81.6% 68.3%
1va0B02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.51 38.0 3.06e-01 91.8% 71.0%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 39.0 2.96e-01 93.9% 44.4%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4952123 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.79 70.0 6.57e-01 100.0% 100.0%
3200703 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.79 70.0 5.82e-01 100.0% 97.6%
3686690 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.78 71.0 5.83e-01 100.0% 97.6%
3723377 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.78 70.0 5.15e-01 100.0% 66.4%
4231372 4.1.1.307 beta barrels › SH3 › SH3 › SH3 › PF26132 0.75 56.0 5.01e-01 81.6% 100.0%
4147528 4.1.1.307 beta barrels › SH3 › SH3 › SH3 › PF26132 0.74 54.0 4.86e-01 79.6% 100.0%
3285401 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.73 62.0 5.49e-01 100.0% 77.3%
4448678 4.1.1.307 beta barrels › SH3 › SH3 › SH3 › PF26132 0.72 54.0 4.81e-01 85.7% 100.0%
4979507 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.70 53.0 3.85e-01 85.7% 36.9%
5049794 301.1.1.2 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.69 52.0 3.80e-01 85.7% 37.9%
3502208 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 61.0 4.82e-01 100.0% 65.0%
3590261 822.3.1.1 a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.68 57.0 5.20e-01 100.0% 85.3%
3404658 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 54.0 4.71e-01 100.0% 73.8%
3922242 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.64 54.0 4.30e-01 100.0% 57.1%
3287985 10.12.1.40 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC_2 0.63 52.0 3.32e-01 100.0% 24.6%
4854035 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 53.0 4.70e-01 100.0% 77.9%
3786112 317.1.1.0 a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase 0.63 53.0 3.77e-01 100.0% 61.2%
5048625 224.1.1.0 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.63 52.0 4.28e-01 100.0% 49.0%
3909855 12.5.1.2 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS 0.63 53.0 3.69e-01 100.0% 55.7%
3919987 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 52.0 4.14e-01 100.0% 54.5%
3568179 11.1.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.62 51.0 4.00e-01 100.0% 50.0%
3932273 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 51.0 4.40e-01 100.0% 61.2%
5068178 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.62 45.0 3.80e-01 83.7% 67.4%
5010640 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 47.0 4.09e-01 100.0% 51.1%
3937926 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 55.0 4.62e-01 100.0% 65.0%
3539015 4357.1.1.5 beta barrels › WWE domain › WWE domain › WWE domain › WWE_4 0.61 46.0 3.56e-01 87.8% 58.1%
3444038 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 53.0 4.43e-01 100.0% 57.6%
3177414 4076.1.1.2 a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.60 44.0 4.39e-01 83.7% 80.0%
3782773 822.1.1.1 a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF 0.60 49.0 4.79e-01 100.0% 92.7%
3224158 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.59 51.0 4.31e-01 100.0% 62.4%
4243029 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.59 50.0 3.14e-01 100.0% 44.7%
4017407 245.1.1.1 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.59 51.0 4.57e-01 100.0% 70.0%
3510271 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 50.0 3.85e-01 100.0% 60.0%
3479367 822.1.1.1 a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF 0.59 47.0 4.45e-01 98.0% 82.8%
3839138 2004.1.1.36 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N 0.58 47.0 3.07e-01 98.0% 26.5%
5032187 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 40.0 3.95e-01 75.5% 96.4%
4928625 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.57 51.0 3.24e-01 98.0% 21.8%
4990489 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 43.0 4.38e-01 87.8% 100.0%
3971767 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 43.0 3.62e-01 87.8% 87.4%
4950851 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 39.0 4.04e-01 73.5% 100.0%
4982792 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.56 40.0 2.98e-01 83.7% 33.1%
3783311 245.1.1.0 a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.56 48.0 3.82e-01 100.0% 54.3%
4120009 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.56 44.0 3.68e-01 100.0% 67.6%
3541348 11.1.1.538 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CHRD 0.56 48.0 3.62e-01 100.0% 56.0%
3392704 11.1.1.538 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CHRD 0.55 47.0 3.62e-01 100.0% 54.2%
3170593 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 3.90e-01 100.0% 80.0%
4949209 7541.1.1.1 a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.55 41.0 2.82e-01 87.8% 41.0%
3349557 2484.3.1.2 mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › AMP_N 0.53 40.0 2.81e-01 85.7% 74.3%
3171908 10.32.1.305 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29147 0.53 45.0 2.98e-01 100.0% 52.1%
2561200 223.9.1.1 a+b three layers › Profilin-like › Pa0076-like › Pa0076-like › TagF_N 0.53 46.0 2.96e-01 100.0% 61.1%
5039694 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 41.0 2.93e-01 93.9% 58.2%
3901930 11.1.3.4 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › CHRD 0.52 42.0 3.25e-01 100.0% 51.1%
3591863 228.1.1.1 a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.52 42.0 3.29e-01 100.0% 60.8%
3964752 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.51 39.0 2.98e-01 95.9% 77.8%
4025888 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.51 46.0 3.74e-01 100.0% 81.1%
3816922 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.51 37.0 2.38e-01 81.6% 18.2%