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KT968831.1__ALP47933.1__BPPAER656_01120__00112

Bact-Vir

KT968831.1__ALP47933.1__BPPAER656_01120__00112

Identity

Accession:
KT968831 ↗
Kingdom:
phage

Quality

95.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bugaksanvirus› Pseudomonas_phage_YMC11/02/R656

TaxID: 1755689

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-145
PDB
Domain cluster: rep: CP000711.1__ABQ88388.1__ECRS218_0008__00007__D4-135
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13957.12 best YafO_toxin 69.1 4.30e-19 76.1% 91.1%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zjyC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 22.0 2.99e-01 84.5% 56.8%
2g7uC02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.55 50.0 4.63e-01 100.0% 96.6%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 33.0 3.53e-01 82.4% 68.9%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.54 37.0 2.68e-01 71.1% 40.8%
4mjdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 32.0 3.48e-01 82.4% 71.7%
2k54A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 34.0 3.60e-01 85.9% 73.2%
2r7hB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 33.0 3.23e-01 88.0% 54.7%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 33.0 3.36e-01 85.2% 62.9%
1dbhA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 36.0 3.76e-01 90.8% 78.1%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 23.0 2.94e-01 93.0% 68.3%
2derA02 2.30.30.280 Mainly Beta › Roll › SH3 type barrels. › Adenine nucleotide alpha hydrolases-like domains 0.51 26.0 3.38e-01 86.6% 94.2%
2asbA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 26.0 3.42e-01 75.4% 93.3%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3948190 4312.1.1.14 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YafO_toxin 0.93 84.0 8.63e-01 100.0% 97.8%
4008950 4312.1.1.14 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › YafO_toxin 0.91 81.0 8.46e-01 99.3% 99.2%
3945861 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.78 49.0 6.05e-01 88.7% 100.0%
5056462 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.75 48.0 5.80e-01 92.3% 100.0%
3278065 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.73 53.0 5.89e-01 100.0% 96.4%
3588277 4312.1.1.4 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.70 53.0 5.77e-01 100.0% 96.5%
4552597 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.67 24.0 3.05e-01 83.8% 51.2%
4343591 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.66 24.0 2.77e-01 87.3% 41.9%
4526081 2.1.1.73 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N 0.63 22.0 3.10e-01 81.7% 61.4%
3578306 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 24.0 3.09e-01 87.3% 65.3%
3233742 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 25.0 3.03e-01 93.7% 66.7%
381 2.1.1.57 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.52 23.0 3.00e-01 93.0% 71.8%
4003540 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 37.0 2.51e-01 77.5% 33.7%