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KT968832.1__ALP47936.1__PAER1836_00020__00002

Bact-Vir

KT968832.1__ALP47936.1__PAER1836_00020__00002

Identity

Accession:
KT968832 ↗
Kingdom:
phage

Quality

76.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casadabanvirus› Pseudomonas_phage_YMC11/11/R1836

TaxID: 1755690

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-82
PDB
Domain cluster: rep: MH238466.1__AWY03225.1__X__00002__D16-77
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13693.13 best HTH_35 52.1 7.40e-14 88.3% 81.3%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1neqA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 68.0 6.97e-01 90.9% 93.2%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 62.0 6.00e-01 92.2% 84.3%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 56.0 5.83e-01 81.8% 94.2%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 53.0 5.72e-01 79.2% 96.8%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 55.0 5.80e-01 83.1% 98.5%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 53.0 4.83e-01 80.5% 62.1%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 51.0 4.84e-01 76.6% 71.4%
2ltuA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.71 44.0 4.85e-01 70.1% 79.0%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 56.0 5.69e-01 88.3% 88.2%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 52.0 5.67e-01 80.5% 100.0%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 52.0 5.49e-01 80.5% 94.2%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 52.0 5.29e-01 80.5% 88.2%
3g7dA04 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 55.0 5.27e-01 87.0% 80.2%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 53.0 5.39e-01 83.1% 88.0%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 54.0 5.34e-01 85.7% 85.2%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 52.0 5.42e-01 81.8% 92.9%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 48.0 4.64e-01 81.8% 65.1%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 54.0 5.38e-01 88.3% 93.9%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 50.0 5.07e-01 79.2% 84.4%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 51.0 5.37e-01 83.1% 98.5%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 51.0 4.88e-01 83.1% 73.3%
6b9sB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 50.0 5.09e-01 83.1% 95.9%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 48.0 5.09e-01 85.7% 92.4%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 50.0 5.26e-01 84.4% 98.5%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 49.0 4.83e-01 81.8% 88.1%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 48.0 4.97e-01 81.8% 98.6%
2k9qA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 35.0 4.27e-01 83.1% 100.0%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 43.0 4.61e-01 71.4% 93.8%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 48.0 4.68e-01 84.4% 79.8%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 47.0 4.72e-01 84.4% 87.0%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 49.0 4.85e-01 93.5% 96.5%
5yclA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 43.0 4.51e-01 85.7% 100.0%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 39.0 4.17e-01 71.4% 90.8%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 37.0 3.52e-01 92.2% 55.3%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 40.0 4.22e-01 79.2% 95.4%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 39.0 3.94e-01 81.8% 85.5%
1dgjA04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.52 37.0 2.98e-01 75.3% 84.2%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.52 33.0 3.50e-01 85.7% 73.5%
6vvoE02 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.52 37.0 3.51e-01 77.9% 91.9%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.51 39.0 3.90e-01 81.8% 86.1%
7t2rC01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.51 33.0 3.72e-01 71.4% 89.5%
7vw6B01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.51 37.0 3.86e-01 97.4% 89.6%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943356 101.1.4.19 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_35 0.94 85.0 8.62e-01 93.5% 97.3%
2845737 101.1.4.19 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_35 0.88 72.0 7.28e-01 88.3% 86.8%
4455317 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 58.0 5.72e-01 83.1% 83.7%
2888862 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.75 56.0 5.93e-01 80.5% 100.0%
4448496 101.1.4.27 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.74 58.0 6.02e-01 85.7% 98.6%
4978931 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 56.0 5.88e-01 83.1% 100.0%
4679747 101.1.4.27 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.73 57.0 5.67e-01 84.4% 85.0%
5028787 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 57.0 5.84e-01 85.7% 96.0%
3954383 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 56.0 5.58e-01 83.1% 85.0%
4216060 101.1.4.27 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.73 58.0 5.74e-01 85.7% 85.0%
3180596 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.73 57.0 5.53e-01 84.4% 82.4%
4632225 101.1.4.27 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.73 57.0 5.53e-01 84.4% 81.2%
5030212 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 57.0 5.90e-01 84.4% 97.1%
4031703 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.72 55.0 5.74e-01 83.1% 97.1%
4335698 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 56.0 5.35e-01 85.7% 75.6%
3281537 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 52.0 5.12e-01 77.9% 74.1%
2716468 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 54.0 5.23e-01 83.1% 75.6%
4034513 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 52.0 5.72e-01 77.9% 100.0%
5028311 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 58.0 6.05e-01 92.2% 97.1%
3969553 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 54.0 5.48e-01 81.8% 88.0%
5083215 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.71 53.0 5.69e-01 81.8% 95.4%
4818340 101.1.1.9 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.71 53.0 5.68e-01 79.2% 96.8%
4075146 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.71 54.0 4.60e-01 83.1% 53.8%
3602378 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 53.0 5.62e-01 79.2% 98.5%
4530543 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 55.0 5.71e-01 84.4% 97.1%
3952098 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 55.0 5.52e-01 88.3% 82.5%
3285836 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.70 56.0 5.56e-01 88.3% 93.8%
3289357 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.70 56.0 5.30e-01 88.3% 91.6%
3947329 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 54.0 5.80e-01 85.7% 100.0%
166742 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 51.0 5.60e-01 79.2% 96.8%
4283758 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.70 59.0 5.88e-01 93.5% 93.8%
3999292 101.1.4.27 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.70 58.0 5.62e-01 92.2% 88.2%
3062945 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 53.0 5.54e-01 83.1% 90.1%
1185976 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 55.0 5.67e-01 85.7% 93.0%
4410932 101.1.4.27 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CYNS_N 0.69 55.0 5.68e-01 87.0% 98.6%
4956880 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 53.0 5.52e-01 88.3% 91.4%
4937022 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 49.0 5.38e-01 79.2% 96.7%
4945219 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 50.0 5.44e-01 81.8% 100.0%
4609168 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 56.0 5.82e-01 93.5% 100.0%
3973014 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.69 52.0 5.55e-01 81.8% 96.9%
3504520 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 53.0 4.88e-01 84.4% 65.0%
3972740 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.68 52.0 5.54e-01 81.8% 96.9%
3704670 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.68 42.0 4.41e-01 84.4% 68.6%
4998928 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.67 51.0 4.93e-01 83.1% 72.2%
5015485 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.67 50.0 5.33e-01 79.2% 96.9%
3972189 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 50.0 5.14e-01 81.8% 86.7%
3955282 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.66 51.0 5.16e-01 83.1% 85.3%
3588951 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.66 45.0 4.90e-01 71.4% 98.3%
169605 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.66 50.0 4.87e-01 83.1% 82.4%
140568 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.66 50.0 5.21e-01 81.8% 92.6%
3282308 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.66 51.0 5.28e-01 87.0% 92.9%
3285904 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.65 54.0 5.01e-01 89.6% 76.8%
317430 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.65 50.0 5.28e-01 84.4% 98.5%
3588180 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.65 51.0 4.81e-01 85.7% 75.8%
4131083 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.65 48.0 5.16e-01 87.0% 96.9%
4147763 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.64 49.0 5.08e-01 83.1% 94.3%
3589590 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.63 43.0 4.75e-01 74.0% 91.7%
3964678 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.63 48.0 5.08e-01 100.0% 96.9%
5009786 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.63 48.0 4.45e-01 83.1% 77.0%
2809324 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.63 43.0 4.41e-01 71.4% 82.2%
3979277 101.1.1.44 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ParB 0.62 43.0 3.68e-01 72.7% 51.2%
4984278 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.61 44.0 4.48e-01 77.9% 86.7%
3960854 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.61 42.0 4.19e-01 71.4% 71.8%
3949869 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.61 41.0 4.31e-01 71.4% 78.6%
3603736 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.60 44.0 4.32e-01 79.2% 82.4%
3961370 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.59 47.0 4.55e-01 87.0% 88.2%
5061328 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.58 40.0 4.15e-01 71.4% 84.3%
4957698 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.56 48.0 4.08e-01 97.4% 71.3%
5078552 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.55 42.0 3.33e-01 92.2% 37.1%
3257960 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.54 45.0 3.02e-01 100.0% 21.2%
3967135 873.1.1.7 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd 0.51 40.0 3.06e-01 89.6% 63.9%
3283363 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.50 42.0 3.49e-01 93.5% 79.1%