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KT970646.1__ALO79910.1__XO29_0027__00027

Bact-Vir

KT970646.1__ALO79910.1__XO29_0027__00027

Identity

Accession:
KT970646 ↗
Kingdom:
phage

Quality

84.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Waukeshavirus› Bacillus_phage_phiS58

TaxID: 1643327

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-133
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.84 69.0 6.91e-01 100.0% 84.4%
7x4eA01 1.10.1220.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE 0.76 68.0 6.52e-01 96.8% 95.3%
4lrvF00 1.10.1220.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE 0.74 67.0 6.57e-01 100.0% 99.0%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 26.0 2.50e-01 83.2% 26.6%
2rh3A00 1.10.1220.190 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › VirC2, RHH domain 0.67 61.0 5.64e-01 100.0% 93.4%
4hv0C00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.65 54.0 5.58e-01 96.8% 97.8%
4ix7A00 1.10.10.2590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain 0.62 36.0 3.39e-01 97.9% 47.4%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.62 38.0 3.46e-01 100.0% 44.4%
7yulA01 1.10.10.2590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain 0.59 33.0 3.52e-01 97.9% 61.2%
2jgpA03 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.57 50.0 3.78e-01 96.8% 81.1%
1l5aA03 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.57 51.0 3.94e-01 96.8% 81.1%
3gg4A02 1.20.58.2240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 43.0 3.58e-01 82.1% 91.5%
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.56 25.0 3.20e-01 83.2% 70.7%
2jokA01 1.10.4120.10 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain 0.56 41.0 3.36e-01 77.9% 89.7%
2lrmA00 1.10.890.30 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein 0.55 36.0 3.79e-01 100.0% 75.0%
1q9jB02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.55 48.0 3.88e-01 96.8% 85.5%
2vsqA02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.55 49.0 3.64e-01 97.9% 76.6%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.55 44.0 3.57e-01 89.5% 83.1%
2a6hF01 1.20.120.1810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 33.0 2.71e-01 100.0% 31.7%
3h49B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 42.0 3.00e-01 85.3% 53.5%
5t3eB02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.53 46.0 3.41e-01 96.8% 82.7%
7emyA03 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.53 46.0 3.33e-01 96.8% 77.5%
4znmA01 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.53 47.0 3.43e-01 97.9% 78.9%
4pxoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 38.0 3.49e-01 77.9% 74.8%
3iylW04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 40.0 3.05e-01 84.2% 94.0%
7r9xA02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.51 44.0 3.32e-01 95.8% 79.1%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.51 30.0 3.52e-01 93.7% 83.8%
7jtjA01 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.50 44.0 3.27e-01 96.8% 80.2%
2i9dA00 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.50 43.0 3.36e-01 95.8% 85.9%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4373529 101.1.11.43 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › TraY 0.89 85.0 8.33e-01 100.0% 96.0%
3229643 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.78 27.0 2.46e-01 83.2% 25.0%
3287835 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.78 71.0 6.04e-01 96.8% 73.8%
3538408 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.76 27.0 2.71e-01 83.2% 31.6%
2874478 101.1.11.12 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › DndE 0.76 68.0 6.42e-01 98.9% 91.2%
1102657 101.1.11.12 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › DndE 0.73 66.0 6.43e-01 100.0% 94.3%
5011682 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.73 52.0 5.97e-01 97.9% 100.0%
4534556 589.1.1.1 ↗ alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N 0.71 37.0 2.98e-01 93.7% 27.4%
3838156 310.1.1.2 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N 0.61 36.0 3.48e-01 89.5% 50.9%
5035425 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.58 44.0 4.31e-01 80.0% 100.0%
3955387 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.57 50.0 3.62e-01 96.8% 77.0%
2722622 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.57 50.0 3.69e-01 96.8% 79.4%
3284240 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.56 49.0 3.60e-01 96.8% 83.2%
4949916 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.56 49.0 3.50e-01 95.8% 83.7%
4450486 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.55 49.0 3.54e-01 97.9% 78.9%
4990796 604.39.1.9 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 0.54 40.0 3.29e-01 81.1% 87.2%
3962829 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.54 46.0 3.56e-01 94.7% 88.5%
4495127 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 40.0 3.23e-01 81.1% 87.3%
4079912 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.54 41.0 3.85e-01 82.1% 90.8%
3288786 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.53 46.0 3.35e-01 97.9% 80.0%
4598975 1002.1.1.0 ↗ alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel 0.52 38.0 3.63e-01 76.8% 95.6%
4679899 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.52 45.0 3.45e-01 96.8% 83.9%
5041293 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 4.16e-01 100.0% 87.8%
4021537 2002.1.1.44 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TatD_DNase 0.52 48.0 3.21e-01 100.0% 96.8%
4886404 4042.1.1.1 ↗ a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_6 0.51 28.0 2.17e-01 82.1% 22.7%
3972942 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.51 44.0 3.24e-01 96.8% 77.4%
4309097 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.51 45.0 3.36e-01 97.9% 81.6%
3429998 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.51 40.0 2.92e-01 86.3% 56.5%
None — 0.51 37.0 3.19e-01 80.0% 81.7%
4565825 604.39.1.9 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 0.50 38.0 3.16e-01 84.2% 91.3%
4034151 604.39.1.9 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 0.50 38.0 3.04e-01 83.2% 91.6%
5045194 1002.1.1.1 ↗ alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB 0.50 36.0 3.38e-01 75.8% 90.0%