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KT989433.2__ALO79394.1__X__00024

Bact-Vir

KT989433.2__ALO79394.1__X__00024

Identity

Accession:
KT989433 ↗
Kingdom:
phage

Quality

66.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-85
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.75 53.0 3.29e-01 74.6% 22.0%
3eagA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.74 57.0 3.91e-01 82.1% 32.9%
4fvkA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.73 52.0 3.21e-01 74.6% 22.1%
6g1nD01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 53.0 4.92e-01 86.6% 66.3%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 52.0 4.08e-01 82.1% 83.9%
4mdaA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 48.0 3.45e-01 77.6% 32.0%
2pptA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 45.0 3.88e-01 73.1% 100.0%
2x49A01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.64 46.0 4.13e-01 76.1% 94.8%
1ajoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 46.0 3.21e-01 76.1% 90.6%
2mtzA02 2.40.440.10 Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like 0.63 44.0 3.64e-01 71.6% 87.4%
2e63A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.62 43.0 3.24e-01 73.1% 65.3%
5xrkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 43.0 3.41e-01 73.1% 54.6%
3dgtA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 46.0 3.09e-01 82.1% 34.9%
2r6iA01 3.30.2180.10 Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like 0.61 46.0 4.13e-01 82.1% 60.4%
3a5pA00 2.60.200.70 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.61 44.0 3.89e-01 77.6% 67.0%
3vv1A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 44.0 3.52e-01 77.6% 51.8%
1w4vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 42.0 3.59e-01 73.1% 97.3%
4immA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 45.0 2.90e-01 82.1% 23.0%
3mixA01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.60 46.0 3.80e-01 83.6% 56.7%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.59 36.0 3.95e-01 83.6% 77.4%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 45.0 3.27e-01 83.6% 39.7%
4azzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.59 43.0 3.29e-01 79.1% 45.5%
3hz4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 44.0 3.62e-01 79.1% 80.8%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 42.0 3.09e-01 77.6% 36.3%
1o4yA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 43.0 2.89e-01 82.1% 34.1%
4cswA02 3.40.366.30 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 0.57 42.0 3.18e-01 80.6% 39.8%
2wm1A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.57 45.0 2.92e-01 88.1% 50.6%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 38.0 2.61e-01 73.1% 28.1%
3e9mB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.56 44.0 3.15e-01 85.1% 100.0%
5ocrA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 42.0 2.84e-01 82.1% 38.8%
4epkB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.56 46.0 2.94e-01 91.0% 50.3%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 43.0 4.34e-01 86.6% 94.0%
3hrgA02 3.30.420.260 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain 0.56 40.0 3.41e-01 76.1% 47.4%
6xofA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 43.0 2.99e-01 88.1% 33.6%
1gbgA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 40.0 2.90e-01 79.1% 37.4%
3mydA01 3.40.30.60 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 0.55 45.0 3.54e-01 89.6% 60.4%
3odtA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 2.80e-01 85.1% 22.6%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 48.0 3.22e-01 98.5% 94.6%
2jd4A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 41.0 3.08e-01 82.1% 39.2%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 47.0 4.28e-01 100.0% 100.0%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.53 42.0 3.35e-01 92.5% 69.2%
5ocqA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 38.0 2.62e-01 82.1% 36.9%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3237501 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.77 50.0 3.09e-01 97.0% 11.8%
4941012 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.76 43.0 2.47e-01 94.0% 7.1%
3507571 5.1.4.47 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N 0.74 50.0 3.07e-01 70.1% 17.8%
3722450 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.73 64.0 4.97e-01 98.5% 46.9%
3776367 5.1.4.47 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N 0.72 49.0 3.36e-01 70.1% 31.2%
3235525 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.72 46.0 3.27e-01 71.6% 22.0%
3294867 3459.1.1.3 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 0.72 50.0 4.43e-01 73.1% 88.4%
3886357 5.1.4.47 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N 0.72 49.0 3.00e-01 70.1% 18.1%
5028523 4100.1.1.3 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.72 57.0 5.78e-01 95.5% 89.2%
3823929 220.1.1.163 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7046 0.71 57.0 4.65e-01 85.1% 87.5%
3878170 5.1.4.549 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF28327 0.69 50.0 3.21e-01 77.6% 29.5%
3801175 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 54.0 4.73e-01 85.1% 59.0%
3996644 330.1.1.24 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C 0.68 54.0 4.74e-01 86.6% 61.0%
4529871 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.68 46.0 4.17e-01 71.6% 89.5%
5081740 2484.1.1.342 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF29288 0.68 46.0 3.41e-01 70.1% 29.7%
3618369 330.1.1.24 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C 0.67 52.0 4.61e-01 85.1% 59.0%
3899046 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.67 45.0 3.28e-01 70.1% 34.1%
4032952 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.66 50.0 3.48e-01 82.1% 23.9%
5079725 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 50.0 5.16e-01 83.6% 100.0%
5029920 4100.1.1.3 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.66 48.0 4.86e-01 83.6% 80.0%
3584129 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.66 50.0 2.91e-01 80.6% 16.0%
3788141 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.66 50.0 4.83e-01 82.1% 80.0%
3931157 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 46.0 4.73e-01 74.6% 86.2%
4950216 4100.1.1.3 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.65 42.0 4.66e-01 76.1% 91.7%
3823735 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 55.0 5.18e-01 100.0% 91.8%
4341865 4325.1.1.1 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.65 47.0 5.01e-01 80.6% 96.4%
4277215 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.65 47.0 3.58e-01 77.6% 82.3%
3579842 5.1.4.47 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N 0.65 48.0 2.98e-01 79.1% 22.4%
3849060 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 47.0 2.89e-01 76.1% 28.2%
3738198 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 44.0 2.79e-01 73.1% 17.0%
3196185 5.1.5.76 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N 0.64 44.0 2.74e-01 73.1% 18.5%
3239923 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.63 44.0 3.89e-01 74.6% 50.5%
3661480 5.1.4.224 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.63 44.0 2.75e-01 73.1% 20.3%
3718321 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.63 50.0 3.00e-01 88.1% 20.8%
5024856 2003.1.3.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.63 50.0 3.04e-01 85.1% 79.8%
3604000 2003.6.1.5 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.63 42.0 2.89e-01 70.1% 33.8%
4467857 296.1.1.3 a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 0.63 43.0 3.80e-01 70.1% 96.0%
3233381 5.1.4.47 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N 0.62 47.0 3.01e-01 82.1% 23.5%
3643064 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.62 44.0 3.17e-01 76.1% 42.9%
3554889 5.1.3.251 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF28327 0.62 50.0 3.14e-01 89.6% 21.1%
3617805 10.1.1.23 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neuralized 0.61 45.0 3.23e-01 77.6% 53.7%
3512065 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 46.0 4.74e-01 83.6% 84.6%
3229685 5.1.4.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD 0.61 47.0 3.05e-01 83.6% 33.1%
3781352 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 43.0 2.86e-01 74.6% 20.0%
3615349 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 44.0 2.45e-01 79.1% 8.5%
3598659 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 43.0 2.67e-01 77.6% 17.7%
3915668 330.1.1.19 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 0.59 44.0 4.09e-01 83.6% 78.9%
4473615 513.1.1.1 a+b two layers › Obg GTP-binding protein C-terminal domain-like › Obg GTP-binding protein C-terminal domain › Obg GTP-binding protein C-terminal domain › DUF1967 0.59 34.0 3.07e-01 77.6% 40.4%
4964912 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.58 49.0 3.74e-01 94.0% 70.6%
3887028 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 49.0 3.19e-01 98.5% 25.8%
4029623 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 46.0 2.71e-01 86.6% 13.4%
3609929 5.1.4.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.58 45.0 2.70e-01 83.6% 25.9%
4639537 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.58 44.0 2.92e-01 80.6% 47.9%
3644563 5.1.4.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.58 49.0 2.88e-01 94.0% 24.1%
4117230 329.1.1.1 a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › GAD 0.57 45.0 3.32e-01 88.1% 78.4%
3176337 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 49.0 3.08e-01 98.5% 18.4%
4878220 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.56 46.0 2.99e-01 91.0% 50.2%
3491452 5.1.4.47 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N 0.56 47.0 2.95e-01 95.5% 16.8%
3687178 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 46.0 2.91e-01 100.0% 20.5%
4996528 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.54 34.0 3.87e-01 79.1% 86.0%
2486950 7052.1.1.1 a+b two layers › N-terminal domain of PprA › N-terminal domain of PprA › N-terminal domain of PprA › PF29825 0.53 40.0 3.50e-01 83.6% 53.4%
5045984 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.52 40.0 3.65e-01 80.6% 81.2%
3265509 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 36.0 2.95e-01 74.6% 79.9%
3968393 2485.1.1.6 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FHIPEP 0.51 40.0 3.50e-01 88.1% 74.5%
3262209 243.6.1.4 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.51 39.0 3.55e-01 82.1% 77.8%
3596156 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.51 42.0 3.34e-01 92.5% 55.7%
3389887 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.50 36.0 3.32e-01 74.6% 75.3%
D2 high residues 103-216
PDB