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KU130130.1__AMR57935.1__vB_PsyM_KIL5_0035__00035

Bact-Vir

KU130130.1__AMR57935.1__vB_PsyM_KIL5_0035__00035

Identity

Accession:
KU130130 ↗
Kingdom:
phage

Quality

89.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Flaumdravirus› Pseudomonas_phage_vB_PsyM_KIL5

TaxID: 1777070

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-61
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wwhA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.76 54.0 3.73e-01 84.1% 22.2%
1gtvA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 55.0 3.60e-01 81.8% 17.8%
1w36C06 1.10.10.990 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 47.0 4.05e-01 79.5% 47.2%
4b3hA03 1.10.1040.50 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › 0.62 49.0 3.10e-01 86.4% 39.2%
4bvxA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 45.0 3.44e-01 81.8% 40.0%
4mspB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 46.0 4.04e-01 93.2% 56.0%
1b04A03 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.58 40.0 3.70e-01 75.0% 56.5%
2af6A02 6.10.140.450 Special › Helix non-globular › Helix Hairpins › 0.53 43.0 4.01e-01 100.0% 83.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3993627 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 49.0 4.20e-01 84.1% 41.4%
4465267 589.1.1.1 ↗ alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N 0.68 54.0 3.50e-01 86.4% 92.2%
3287102 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 49.0 4.03e-01 79.5% 82.4%
4502641 589.1.1.1 ↗ alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N 0.64 50.0 3.29e-01 86.4% 88.6%
2636373 602.1.1.3 ↗ alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_aromatic 0.64 49.0 2.95e-01 86.4% 21.5%