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KU160494.1__ALY07084.1__VmeM32_00095__00088

Bact-Vir

KU160494.1__ALY07084.1__VmeM32_00095__00088

Identity

Accession:
KU160494 ↗
Kingdom:
phage

Quality

80.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-66
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.83 57.0 4.96e-01 98.3% 49.4%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4996404 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.77 58.0 4.22e-01 79.7% 32.0%
3654599 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.75 54.0 4.69e-01 79.7% 48.4%
3233670 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.74 63.0 4.72e-01 96.6% 38.6%
3243897 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.74 62.0 4.78e-01 96.6% 89.3%
3993981 304.48.1.3 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.69 52.0 3.53e-01 83.1% 46.2%
4932480 304.48.1.3 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.69 48.0 3.32e-01 79.7% 20.5%
3750022 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.68 55.0 4.57e-01 98.3% 49.1%
4799494 304.48.1.3 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.62 44.0 4.25e-01 79.7% 70.0%
3523787 7558.1.1.1 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase 0.57 51.0 3.22e-01 100.0% 44.9%
D2 medium residues 67-173
PDB
D3 medium residues 178-282
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01079.26 best Hint 30.4 4.00e-07 70.5% 31.5%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lwyA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.90 82.0 7.39e-01 100.0% 73.2%
1am2A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.89 86.0 6.91e-01 100.0% 82.3%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.89 84.0 6.78e-01 100.0% 82.2%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.89 84.0 7.40e-01 100.0% 78.6%
1mi8A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.88 84.0 7.49e-01 100.0% 75.9%
2imzA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.87 83.0 7.35e-01 100.0% 80.3%
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 81.0 6.68e-01 100.0% 81.9%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 81.0 6.76e-01 100.0% 80.5%
4e2tB00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 81.0 6.77e-01 100.0% 81.1%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.86 81.0 6.74e-01 100.0% 77.1%
1zdeA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.85 80.0 6.79e-01 100.0% 73.8%
2jmzA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.85 78.0 6.61e-01 100.0% 79.8%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 79.0 6.56e-01 100.0% 80.1%
4lx3A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 71.0 7.25e-01 88.6% 92.1%
6zgqA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.84 78.0 6.88e-01 100.0% 76.9%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 27.0 3.15e-01 73.3% 68.4%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4983458 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.93 89.0 7.42e-01 100.0% 80.6%
4994372 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.93 79.0 7.51e-01 100.0% 77.5%
4993128 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.91 87.0 7.34e-01 100.0% 77.5%
4993437 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.91 84.0 7.38e-01 96.2% 81.9%
4982797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.91 87.0 7.61e-01 100.0% 75.9%
5035476 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.90 86.0 7.28e-01 100.0% 79.4%
4318313 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 84.0 7.88e-01 98.1% 94.4%
259963 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.90 82.0 7.39e-01 100.0% 73.2%
4996523 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 85.0 6.66e-01 100.0% 83.0%
3963364 69.1.1.3 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.90 86.0 7.53e-01 100.0% 72.4%
4983616 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 85.0 7.05e-01 100.0% 77.6%
4975578 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 85.0 6.03e-01 100.0% 45.1%
4999902 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 85.0 7.46e-01 100.0% 75.9%
4070999 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.89 85.0 7.26e-01 100.0% 73.5%
5028788 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 85.0 7.56e-01 100.0% 75.7%
2524072 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 84.0 6.99e-01 100.0% 80.0%
4993853 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 84.0 7.08e-01 100.0% 81.2%
182766 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 84.0 6.78e-01 100.0% 82.2%
4392318 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 85.0 6.80e-01 100.0% 82.2%
4084747 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.89 85.0 5.78e-01 100.0% 90.3%
5002632 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 85.0 7.38e-01 100.0% 77.9%
4600944 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 84.0 6.91e-01 100.0% 65.1%
4487998 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.89 84.0 6.91e-01 100.0% 65.1%
5012957 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 84.0 6.91e-01 100.0% 78.9%
4940451 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 84.0 7.60e-01 100.0% 79.3%
4977673 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 84.0 6.36e-01 100.0% 84.9%
4930433 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 84.0 7.22e-01 100.0% 78.7%
4945569 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 84.0 7.23e-01 100.0% 76.1%
4993927 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 83.0 7.24e-01 99.0% 83.3%
4975503 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.89 84.0 6.83e-01 100.0% 82.8%
4342207 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 84.0 7.30e-01 100.0% 79.3%
3603108 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 84.0 7.40e-01 100.0% 72.4%
5030213 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.89 84.0 7.28e-01 100.0% 73.3%
4544734 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 85.0 6.49e-01 100.0% 85.2%
3604383 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 84.0 6.42e-01 100.0% 83.7%
3949431 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 84.0 7.31e-01 100.0% 79.3%
5029540 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 7.09e-01 100.0% 78.1%
5028312 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 7.40e-01 100.0% 74.3%
5012699 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 84.0 6.94e-01 100.0% 82.4%
3495262 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.88 83.0 6.78e-01 100.0% 64.4%
5023539 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 7.15e-01 100.0% 81.3%
4943231 69.1.1.16 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › ATP-synt_ab 0.88 83.0 6.75e-01 100.0% 79.4%
5031634 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.88 83.0 7.03e-01 100.0% 74.4%
4979524 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.88 83.0 6.06e-01 100.0% 85.2%
5024341 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 6.66e-01 100.0% 79.5%
4993581 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 82.0 6.85e-01 100.0% 77.1%
4984220 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 82.0 7.06e-01 100.0% 82.6%
1291738 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 74.0 7.32e-01 88.6% 92.7%
4948019 69.1.1.17 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM 0.87 82.0 6.76e-01 100.0% 79.4%
2445477 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 83.0 7.11e-01 100.0% 70.8%
5014854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 82.0 6.29e-01 100.0% 82.3%
4039971 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.87 82.0 6.76e-01 100.0% 80.0%
4992651 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 82.0 6.91e-01 100.0% 75.8%
5022295 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 83.0 6.92e-01 100.0% 78.2%
4170121 69.1.1.11 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT, Intein_splicing 0.87 82.0 6.81e-01 100.0% 80.0%
4998394 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.87 82.0 7.04e-01 100.0% 83.9%
4971412 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 6.64e-01 100.0% 83.3%
4978263 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 6.84e-01 100.0% 78.2%
4993480 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 82.0 6.94e-01 100.0% 77.5%
3282306 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 82.0 7.40e-01 100.0% 77.8%
5065032 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 82.0 6.87e-01 100.0% 73.3%
3603291 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 81.0 6.67e-01 100.0% 76.6%
4944478 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 72.0 6.86e-01 87.6% 100.0%
5066389 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 81.0 6.47e-01 100.0% 80.0%
4993808 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 7.17e-01 100.0% 77.2%
5031914 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.86 80.0 6.51e-01 100.0% 78.4%
4948016 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 81.0 7.04e-01 100.0% 79.3%
4998392 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.86 82.0 6.82e-01 100.0% 81.2%
4993871 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 81.0 7.81e-01 100.0% 99.1%
4975971 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 72.0 6.64e-01 88.6% 77.7%
3517362 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.85 80.0 7.10e-01 100.0% 79.2%
3952464 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.85 81.0 7.13e-01 100.0% 73.1%
3230518 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.85 80.0 6.89e-01 100.0% 79.4%
3604113 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 80.0 7.04e-01 100.0% 77.9%
5052154 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.85 80.0 6.71e-01 100.0% 77.6%
5009161 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 79.0 5.55e-01 100.0% 88.0%
164902 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 78.0 6.45e-01 100.0% 74.4%
4642797 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.85 79.0 6.59e-01 100.0% 80.6%
3511246 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.85 79.0 6.69e-01 100.0% 71.5%
4932851 69.1.1.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.85 77.0 7.02e-01 100.0% 75.6%
4970868 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 70.0 6.59e-01 87.6% 96.0%
4979631 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 80.0 6.94e-01 100.0% 79.3%
4127166 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 79.0 6.91e-01 100.0% 80.0%
4993813 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 79.0 6.74e-01 100.0% 78.1%
3604439 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.84 78.0 6.52e-01 100.0% 79.4%
4779324 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.84 71.0 7.25e-01 88.6% 92.1%
5013038 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 78.0 6.66e-01 100.0% 78.1%
4943244 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 77.0 6.48e-01 100.0% 80.6%
5029355 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.83 78.0 6.79e-01 100.0% 80.0%
4971400 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 70.0 4.91e-01 89.5% 39.3%
4326329 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 76.0 6.37e-01 100.0% 78.2%
5029854 69.1.1.4 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.82 76.0 5.93e-01 100.0% 81.0%
4997604 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 75.0 6.32e-01 100.0% 76.5%
5065932 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 74.0 6.66e-01 100.0% 74.3%
5035795 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.80 74.0 6.54e-01 100.0% 75.2%
4999893 69.1.1.0 beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 66.0 6.39e-01 87.6% 95.6%