←Back to structures
KU160494.1__ALY07091.1__VmeM32_00102__00095
Bact-VirKU160494.1__ALY07091.1__VmeM32_00102__00095
Identity
- Accession:
- KU160494 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Vibrio_phage_vB_VmeM-32
TaxID: 1775142
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-91
Domain cluster:
rep: OM982621.1__UOL48817.1__X__00222__D5-91
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08993.16 best | T4_Gp59_N | 67.8 | 1.30e-18 | 86.7% | 81.7% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c1kA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.91 | 83.0 | 7.90e-01 | 95.6% | 86.3% |
| 4d3zA02 | 1.10.132.130 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.64 | 39.0 | 3.69e-01 | 78.9% | 50.9% |
| 1x4oA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.51 | 39.0 | 4.16e-01 | 92.2% | 93.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4841 | 546.1.1.1 ↗ | alpha complex topology › gene 59 helicase assembly protein › gene 59 helicase assembly protein › gene 59 helicase assembly protein | 0.91 | 87.0 | 6.30e-01 | 100.0% | 42.4% |
| 3622067 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.56 | 31.0 | 3.31e-01 | 74.4% | 60.0% |
| 3170882 | 603.1.1.210 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Tmemb_170 | 0.53 | 43.0 | 3.97e-01 | 90.0% | 93.3% |
| 1820993 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 40.0 | 4.19e-01 | 91.1% | 92.6% |
| 4589812 | 3922.1.1.294 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF2418 | 0.51 | 41.0 | 3.88e-01 | 86.7% | 80.9% |
D2
high
residues 110-221
Domain cluster:
rep: NC_015251.1__YP_004300892.1__ST65p053__00054__D54-144
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08994.16 best | T4_Gp59_C | 75.8 | 5.40e-21 | 91.1% | 99.1% |