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KU160494.1__ALY07154.1__VmeM32_00168__00159

Bact-Vir

KU160494.1__ALY07154.1__VmeM32_00168__00159

Identity

Accession:
KU160494 ↗
Kingdom:
phage

Quality

96.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-52
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 48.0 4.16e-01 82.4% 86.7%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.62 47.0 4.10e-01 84.3% 88.7%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.62 45.0 3.71e-01 78.4% 48.4%
1f32A01 3.30.1120.50 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Pepsin inhibitor-3 0.60 36.0 3.36e-01 100.0% 46.3%
3hi7B02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 42.0 3.26e-01 78.4% 46.9%
4hwmA00 2.40.128.500 Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein 0.57 42.0 3.25e-01 80.4% 78.6%
3vtiA06 3.30.420.560 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.55 45.0 3.73e-01 100.0% 89.5%
5ixcA01 3.40.1090.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain 0.54 46.0 2.73e-01 100.0% 12.5%
3rklA00 6.10.140.1640 Special › Helix non-globular › Helix Hairpins › 0.54 44.0 3.86e-01 94.1% 88.7%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.52 41.0 3.35e-01 98.0% 63.0%
3cihA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 43.0 3.34e-01 100.0% 59.3%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1291570 101.1.2.179 alpha arrays › HTH › HTH › winged helix domain › ROXA-like_wH 0.65 45.0 3.58e-01 72.5% 63.6%
3903050 330.1.1.17 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm_Ferlin 0.61 44.0 3.57e-01 78.4% 79.0%
3627795 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 47.0 4.07e-01 88.2% 76.5%
3669824 386.1.1.20 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.59 42.0 4.14e-01 76.5% 78.2%
4272595 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 47.0 4.81e-01 92.2% 96.0%
4203469 375.1.1.47 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.58 46.0 4.52e-01 92.2% 92.7%
3626593 633.23.1.5 alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.56 47.0 3.19e-01 100.0% 57.3%
4120366 375.1.1.47 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.55 43.0 4.24e-01 92.2% 92.7%
3960403 4076.2.1.0 a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like 0.54 33.0 3.12e-01 80.4% 44.6%
4947543 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.54 40.0 3.66e-01 86.3% 78.4%
3738632 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 46.0 2.79e-01 100.0% 25.8%
3996808 3749.1.1.6 extended segments › 26S proteasome regulatory subunits C-terminal helices › 26S proteasome regulatory subunit RPN9 C-terminal helix › 26S proteasome regulatory subunit RPN9 C-terminal helix › Pepsin-I3 0.53 38.0 3.48e-01 100.0% 57.1%
5022655 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.52 42.0 3.32e-01 100.0% 85.2%
3258825 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.50 36.0 2.24e-01 84.3% 14.2%
D2 medium residues 115-199
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lrvA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.92 88.0 6.12e-01 100.0% 36.5%
3ltjA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.88 81.0 6.11e-01 100.0% 55.5%
3vwaA03 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.88 82.0 5.43e-01 100.0% 44.3%
8sorA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.87 81.0 5.23e-01 100.0% 43.2%
6igxD01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.87 81.0 5.57e-01 100.0% 43.1%
3gs3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.85 78.0 5.46e-01 100.0% 69.9%
1oyzA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.84 77.0 5.29e-01 100.0% 40.7%
3woyA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.80 72.0 5.16e-01 100.0% 58.1%
7cgfA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.80 72.0 4.76e-01 100.0% 39.2%
4xriA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.79 71.0 4.05e-01 100.0% 16.8%
1qgrA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.77 68.0 3.85e-01 96.5% 22.2%
6tblB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.76 60.0 5.49e-01 84.7% 93.7%
1b3uA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.74 66.0 3.98e-01 100.0% 22.1%
1f59A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.74 66.0 4.19e-01 100.0% 32.3%
3ebbA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.73 65.0 4.61e-01 100.0% 58.7%
3nowA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.73 65.0 4.29e-01 100.0% 51.4%
1bk6A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.73 65.0 4.13e-01 100.0% 36.5%
4cruB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.73 65.0 4.57e-01 100.0% 61.1%
4g3aB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.73 65.0 4.75e-01 100.0% 59.4%
4u2xF00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.73 65.0 5.14e-01 100.0% 85.7%
7ldgA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.72 64.0 4.77e-01 100.0% 70.9%
2of3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.72 64.0 4.54e-01 100.0% 54.9%
7dvqK01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.72 64.0 5.11e-01 100.0% 79.8%
3au3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.72 64.0 4.40e-01 100.0% 50.2%
4y5jA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.72 64.0 4.72e-01 100.0% 58.6%
2qk1A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.71 63.0 4.60e-01 100.0% 58.6%
3sl9B00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.71 62.0 5.05e-01 100.0% 83.6%
1g3jC00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.71 61.0 3.94e-01 100.0% 31.4%
4r0zA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.71 61.0 3.77e-01 100.0% 31.6%
2qk2A01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.70 60.0 4.44e-01 97.6% 57.7%
4ffbC00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.70 61.0 4.52e-01 100.0% 63.2%
8gpvA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.68 60.0 5.26e-01 100.0% 80.6%
8gpsA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.67 56.0 5.33e-01 95.3% 94.3%
4qmhA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.67 58.0 4.34e-01 100.0% 56.8%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.67 58.0 5.17e-01 100.0% 87.2%
5vjcA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.67 58.0 4.17e-01 100.0% 55.3%
6whbA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.66 57.0 4.02e-01 98.8% 59.2%
2a2fX02 1.20.58.670 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D 0.64 47.0 4.14e-01 77.6% 90.7%
1dvpA01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 56.0 4.73e-01 96.5% 100.0%
1qsaA01 1.25.20.10 Mainly Alpha › Alpha Horseshoe › 70-kda Soluble Lytic Transglycosylase; domain 1 › Bacterial muramidases 0.63 54.0 3.66e-01 100.0% 34.2%
2b6cA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.61 53.0 5.15e-01 97.6% 87.6%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4335802 109.4.1.3098 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LRV, LRV_FeS 0.93 88.0 6.30e-01 100.0% 39.5%
4602 109.4.1.24 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LRV,HEAT,LRV_FeS 0.92 88.0 6.12e-01 100.0% 36.5%
None 0.89 83.0 5.35e-01 100.0% 38.8%
3675794 109.4.1.1556 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_HEAT, PDS5 0.84 77.0 4.86e-01 100.0% 37.8%
3214039 109.4.1.1590 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, HEAT_2 0.82 75.0 5.15e-01 100.0% 44.3%
4020501 109.4.1.1255 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 0.82 75.0 4.33e-01 98.8% 17.9%
3607471 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.82 74.0 6.03e-01 100.0% 90.3%
3516890 109.4.1.298 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VPS15-like_hel 0.81 73.0 4.38e-01 100.0% 29.4%
3705132 109.4.1.161 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › mTOR_dom 0.81 73.0 4.06e-01 100.0% 12.5%
3593022 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 73.0 4.76e-01 100.0% 35.4%
3542904 109.4.1.1784 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28344 0.79 72.0 4.09e-01 100.0% 20.6%
3595992 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 69.0 4.93e-01 100.0% 55.5%
3285372 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 67.0 5.12e-01 100.0% 62.0%
3240658 109.4.1.409 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm,IBB,Arm_3 0.76 68.0 4.81e-01 100.0% 59.6%
3509210 109.4.1.2 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm 0.75 67.0 4.58e-01 100.0% 52.1%
3770684 109.4.1.3 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm,Arm_3 0.75 62.0 4.71e-01 90.6% 66.0%
3807941 109.4.1.1380 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, IBB, HEAT_2, Arm_3 0.75 67.0 4.09e-01 100.0% 26.0%
3738108 109.4.1.2220 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30130 0.75 67.0 4.72e-01 100.0% 78.1%
3809627 109.4.1.1380 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, IBB, HEAT_2, Arm_3 0.75 66.0 4.09e-01 100.0% 27.3%
3340971 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.74 66.0 4.33e-01 100.0% 41.9%
3384602 109.4.1.2 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm 0.74 66.0 4.12e-01 100.0% 33.2%
3538325 109.4.1.892 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_ARMC5 0.74 67.0 4.38e-01 100.0% 41.4%
3263560 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.74 66.0 3.65e-01 100.0% 11.8%
3545994 109.4.1.207 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 0.73 56.0 4.19e-01 81.2% 63.3%
4940421 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.73 65.0 5.22e-01 100.0% 90.6%
3875187 109.4.1.1904 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, ARM_ARMC5 0.73 66.0 4.23e-01 100.0% 40.0%
4387542 109.4.1.170 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N 0.73 65.0 4.67e-01 100.0% 55.6%
2441998 109.4.1.170 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N 0.73 64.0 4.55e-01 100.0% 59.0%
3492534 109.4.1.33 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT 0.73 64.0 4.28e-01 100.0% 74.5%
5019590 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 62.0 4.51e-01 97.6% 45.0%
3846410 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 58.0 4.16e-01 87.1% 76.2%
3352955 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 63.0 4.77e-01 100.0% 77.6%
3677367 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 61.0 4.75e-01 100.0% 72.0%
3254737 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 60.0 4.84e-01 97.6% 89.1%
3913514 109.4.1.846 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Stereocilin 0.68 59.0 4.46e-01 100.0% 79.5%
3653265 109.4.1.2 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm 0.67 59.0 4.57e-01 100.0% 78.0%
3274166 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 58.0 4.42e-01 100.0% 79.5%
5019940 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.67 57.0 5.27e-01 98.8% 87.0%
326759 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.67 58.0 5.14e-01 100.0% 85.8%
3032601 109.13.1.1 alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.66 56.0 5.39e-01 97.6% 100.0%
3498046 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 59.0 4.20e-01 100.0% 77.3%
3810328 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 47.0 3.88e-01 81.2% 100.0%
3486235 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 55.0 3.81e-01 100.0% 55.5%
4877365 109.4.1.2 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm 0.63 54.0 4.75e-01 98.8% 95.4%
3921851 109.4.1.1223 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOP1B 0.62 53.0 4.13e-01 100.0% 78.5%
1108125 109.2.1.38 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro81C 0.61 51.0 3.42e-01 96.5% 69.6%