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KU160494.1__ALY07166.1__VmeM32_00180__00171

Bact-Vir

KU160494.1__ALY07166.1__VmeM32_00180__00171

Identity

Accession:
KU160494 ↗
Kingdom:
phage

Quality

67.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-74
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 61.0 6.36e-01 91.2% 79.2%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 61.0 5.69e-01 91.2% 61.8%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 60.0 6.54e-01 91.2% 89.4%
2ld5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 64.0 6.09e-01 91.2% 68.7%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 59.0 6.35e-01 91.2% 89.4%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 50.0 5.41e-01 89.5% 72.9%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 58.0 5.36e-01 91.2% 59.2%
1e3oC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 53.0 5.73e-01 84.2% 79.2%
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.82 59.0 4.84e-01 78.9% 44.8%
2dn0A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 60.0 5.45e-01 91.2% 60.5%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 53.0 5.28e-01 71.9% 67.2%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 5.51e-01 89.5% 66.7%
1x2mA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 63.0 6.45e-01 94.7% 90.7%
2ys9A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 55.0 5.13e-01 89.5% 60.0%
4d7rA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.77 59.0 5.24e-01 89.5% 58.5%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 48.0 4.68e-01 89.5% 58.7%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 49.0 3.97e-01 89.5% 36.5%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 48.0 4.60e-01 89.5% 59.4%
2da4A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 58.0 5.60e-01 91.2% 75.8%
3fblA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 58.0 5.20e-01 89.5% 72.0%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.72 64.0 4.88e-01 100.0% 68.4%
1x2nA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 56.0 5.55e-01 91.2% 81.7%
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 46.0 4.13e-01 87.7% 49.3%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.72 51.0 4.46e-01 89.5% 48.9%
1xwyA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.71 63.0 4.06e-01 100.0% 30.4%
1wh5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 55.0 4.99e-01 91.2% 63.7%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 51.0 5.58e-01 91.2% 95.7%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.69 47.0 5.19e-01 84.2% 100.0%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 49.0 4.69e-01 89.5% 67.6%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 51.0 4.51e-01 82.5% 84.5%
4hjhA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.67 46.0 3.73e-01 73.7% 89.6%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 4.51e-01 89.5% 66.7%
1d3yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.97e-01 89.5% 74.6%
2ggfA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 56.0 4.24e-01 94.7% 62.8%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.66 56.0 4.74e-01 100.0% 57.1%
1dgjA04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.66 58.0 4.23e-01 100.0% 85.4%
2au3A04 1.20.50.30 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › 0.65 52.0 5.33e-01 98.2% 94.5%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.65 57.0 4.59e-01 98.2% 72.7%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.65 55.0 4.89e-01 91.2% 72.2%
2de2A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.65 54.0 3.72e-01 91.2% 70.6%
2x26A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.63 53.0 3.70e-01 93.0% 76.2%
1irxA05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 48.0 4.28e-01 91.2% 57.0%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 4.30e-01 89.5% 64.8%
3g7rA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 54.0 3.80e-01 100.0% 59.8%
6o9aA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 52.0 3.86e-01 94.7% 88.1%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.62 50.0 4.18e-01 100.0% 49.1%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.61 47.0 4.68e-01 93.0% 95.2%
3zdmB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.60 44.0 4.63e-01 87.7% 90.0%
1tuoA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.60 45.0 3.62e-01 82.5% 89.7%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 51.0 4.86e-01 93.0% 80.3%
2k89A00 3.10.20.870 Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain 0.59 41.0 3.73e-01 73.7% 77.5%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 42.0 4.54e-01 75.4% 100.0%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.68e-01 91.2% 48.1%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 46.0 4.42e-01 93.0% 74.6%
2awiA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 44.0 4.23e-01 82.5% 91.0%
4f03B02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 49.0 3.76e-01 100.0% 83.4%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 4.00e-01 91.2% 64.4%
1bwoA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.57 46.0 4.13e-01 100.0% 78.9%
6xzqA01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.56 47.0 3.41e-01 93.0% 56.8%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 4.25e-01 96.5% 90.4%
1miwA03 1.20.58.560 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 43.0 3.77e-01 98.2% 53.0%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.52 38.0 3.88e-01 80.7% 86.2%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3707222 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 70.0 7.11e-01 89.5% 85.5%
3266463 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 65.0 6.68e-01 91.2% 87.3%
3979215 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 68.0 6.99e-01 89.5% 92.7%
3259221 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.82 64.0 6.31e-01 91.2% 78.3%
3404621 101.1.1.112 alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg 0.82 68.0 5.84e-01 91.2% 61.1%
3905142 101.1.1.112 alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg 0.82 63.0 6.43e-01 82.5% 90.9%
3219209 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 64.0 5.93e-01 91.2% 68.6%
3519655 101.1.10.33 alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C 0.80 72.0 5.21e-01 100.0% 92.9%
2796737 3009.1.1.0 alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like 0.79 62.0 6.07e-01 89.5% 77.4%
3963650 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 61.0 6.48e-01 87.7% 96.0%
3778380 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 60.0 5.57e-01 91.2% 65.7%
4093017 4973.1.1.1 alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaB_bind 0.79 71.0 6.47e-01 100.0% 88.0%
3590898 101.1.20.1 alpha arrays › HTH › HTH › Sigma54 core-binding domain › Sigma54_CBD 0.79 52.0 3.75e-01 89.5% 26.0%
4995688 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 56.0 5.77e-01 87.7% 78.2%
3730715 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 60.0 6.14e-01 89.5% 87.3%
3642026 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 57.0 5.80e-01 91.2% 81.8%
3638575 109.3.1.170 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_4 0.77 68.0 4.37e-01 100.0% 46.7%
3575981 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.76 63.0 5.59e-01 89.5% 93.8%
4992012 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 61.0 6.01e-01 89.5% 81.7%
3606717 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 58.0 6.11e-01 91.2% 96.0%
3534849 101.1.10.7 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.76 67.0 5.30e-01 98.2% 78.3%
4288489 4973.1.1.2 alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › DnaG_cat_HB 0.76 67.0 6.14e-01 100.0% 90.7%
4944587 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.75 64.0 5.30e-01 98.2% 86.7%
3536325 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 60.0 6.11e-01 91.2% 90.9%
4945647 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.74 63.0 5.30e-01 98.2% 90.0%
3524925 108.1.1.86 alpha arrays › EF-hand › EF-hand-related › EF-hand › CAC1F_C 0.73 53.0 5.43e-01 78.9% 89.1%
3318879 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 56.0 5.39e-01 89.5% 75.4%
3927015 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.72 62.0 4.88e-01 100.0% 93.6%
3728726 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 56.0 5.15e-01 89.5% 66.7%
3300593 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 54.0 5.48e-01 91.2% 90.9%
4982919 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.69 59.0 4.80e-01 100.0% 71.3%
3739480 109.4.1.332 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mtf2 0.69 55.0 3.97e-01 91.2% 33.1%
5036595 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.69 56.0 5.67e-01 89.5% 94.5%
4955389 101.1.1.542 alpha arrays › HTH › HTH › Three-helical HTH › DUF790 0.68 55.0 5.61e-01 87.7% 92.7%
3269226 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.68 55.0 5.03e-01 89.5% 72.0%
3486540 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 56.0 3.85e-01 98.2% 38.2%
2913 101.21.1.1 alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N 0.67 53.0 4.97e-01 89.5% 74.6%
3217304 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.67 58.0 4.78e-01 100.0% 81.0%
3604043 608.1.1.1 alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.66 56.0 4.67e-01 98.2% 56.7%
4989131 7523.1.1.11 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › VitK2_biosynth 0.65 54.0 3.83e-01 94.7% 81.7%
3984343 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.64 50.0 3.55e-01 91.2% 63.0%
4056789 4198.1.1.2 alpha arrays › TerB-like › TerB-like › TerB-like › ThylakoidFormat 0.64 53.0 3.79e-01 100.0% 44.5%
3555984 2485.1.1.45 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_8 0.64 51.0 3.44e-01 89.5% 76.8%
4969211 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.63 51.0 3.43e-01 91.2% 23.0%
3433752 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 52.0 3.54e-01 100.0% 42.6%