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KU160494.1__ALY07195.1__VmeM32_00209__00200
Bact-VirKU160494.1__ALY07195.1__VmeM32_00209__00200
Identity
- Accession:
- KU160494 ↗
- Kingdom:
- phage
Quality
90.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Vibrio_phage_vB_VmeM-32
TaxID: 1775142
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-70
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 54.0 | 5.04e-01 | 86.8% | 78.8% |
| 2v4jB01 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 48.0 | 3.94e-01 | 79.4% | 54.5% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.64 | 52.0 | 4.86e-01 | 94.1% | 90.8% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.62 | 46.0 | 2.86e-01 | 80.9% | 50.0% |
| 3axsA02 | 3.30.56.70 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › N2,N2-dimethylguanosine tRNA methyltransferase, C-terminal domain | 0.62 | 45.0 | 4.68e-01 | 77.9% | 95.4% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 45.0 | 3.54e-01 | 76.5% | 56.9% |
| 7uvpA02 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.62 | 44.0 | 4.42e-01 | 76.5% | 88.4% |
| 2eyqA07 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.61 | 51.0 | 4.03e-01 | 94.1% | 51.7% |
| 1whxA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 44.0 | 3.79e-01 | 77.9% | 55.0% |
| 3dgpA00 | 3.30.70.2610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 42.0 | 4.39e-01 | 77.9% | 82.3% |
| 2jtvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 44.0 | 4.55e-01 | 95.6% | 86.2% |
| 1ibaA00 | 3.30.1360.60 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Glucose permease domain IIB | 0.59 | 49.0 | 4.79e-01 | 97.1% | 89.7% |
| 3madA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.59 | 47.0 | 3.87e-01 | 91.2% | 53.4% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 48.0 | 4.23e-01 | 98.5% | 67.9% |
| 3ezjA03 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 39.0 | 4.22e-01 | 72.1% | 87.3% |
| 2i0zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 48.0 | 3.37e-01 | 100.0% | 43.1% |
| 3ipjA01 | 3.30.1360.60 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Glucose permease domain IIB | 0.57 | 45.0 | 4.39e-01 | 92.6% | 82.5% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 46.0 | 4.28e-01 | 95.6% | 84.8% |
| 1g6sA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.57 | 47.0 | 3.48e-01 | 98.5% | 44.6% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 44.0 | 4.34e-01 | 88.2% | 91.8% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 4.47e-01 | 92.6% | 93.1% |
| 3if4A01 | 2.20.20.40 | Mainly Beta › Single Sheet › Anthopleurin-A › Integron cassette protein | 0.56 | 39.0 | 4.36e-01 | 76.5% | 98.0% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 45.0 | 3.70e-01 | 95.6% | 73.2% |
| 1hi9A02 | 3.30.1360.130 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Dipeptide transport protein | 0.55 | 45.0 | 4.40e-01 | 95.6% | 90.8% |
| 2gqcA01 | 3.30.70.2080 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 38.0 | 4.05e-01 | 73.5% | 96.4% |
| 2o0yB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 4.15e-01 | 77.9% | 98.5% |
| 3c7jA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 38.0 | 3.51e-01 | 75.0% | 85.7% |
| 2cw7A02 | 1.10.10.1010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV | 0.54 | 46.0 | 3.70e-01 | 100.0% | 60.3% |
| 3bz5A02 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 4.15e-01 | 92.6% | 96.2% |
| 3by6C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.69e-01 | 76.5% | 80.5% |
| 4gvbA00 | 3.30.70.440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Killer toxin KP6 alpha-subunit | 0.52 | 37.0 | 3.61e-01 | 76.5% | 71.4% |
| 3etvA02 | 1.20.58.2230 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Retrograde transport protein Dsl1, N-terminal domain | 0.52 | 36.0 | 2.57e-01 | 73.5% | 51.1% |
| 4o4bB00 | 3.30.470.160 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase | 0.52 | 43.0 | 3.02e-01 | 98.5% | 82.0% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 3.80e-01 | 86.8% | 81.6% |
| 1vrmA02 | 1.10.3980.10 | Mainly Alpha › Orthogonal Bundle › T-fold › ApbE-like superfamily | 0.51 | 40.0 | 3.69e-01 | 94.1% | 100.0% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999381 | 304.131.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phosphonoacetate hydrolase insertion domain › Phosphonoacetate hydrolase insertion domain | 0.70 | 56.0 | 5.10e-01 | 86.8% | 87.8% |
| 3259873 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.70 | 54.0 | 5.23e-01 | 83.8% | 82.7% |
| 5059723 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.69 | 51.0 | 5.24e-01 | 79.4% | 87.7% |
| 3998582 | 3696.1.1.1 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP | 0.67 | 51.0 | 5.06e-01 | 82.4% | 82.9% |
| 3973554 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.67 | 52.0 | 4.88e-01 | 88.2% | 79.5% |
| 5078523 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.66 | 53.0 | 4.05e-01 | 89.7% | 37.0% |
| 4943163 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.66 | 55.0 | 4.55e-01 | 94.1% | 78.2% |
| 3603159 | 101.1.2.209 ↗ | alpha arrays › HTH › HTH › winged helix domain › MJ1010-like_2nd | 0.66 | 50.0 | 5.02e-01 | 97.1% | 81.4% |
| 4295057 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.66 | 48.0 | 3.23e-01 | 77.9% | 29.6% |
| 5033197 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.65 | 46.0 | 4.72e-01 | 76.5% | 92.3% |
| 4028694 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.65 | 50.0 | 5.13e-01 | 85.3% | 93.8% |
| 4042477 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.64 | 54.0 | 4.26e-01 | 97.1% | 50.7% |
| 4956112 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.63 | 50.0 | 4.72e-01 | 89.7% | 80.0% |
| 3602755 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.63 | 50.0 | 4.92e-01 | 92.6% | 82.7% |
| 5010613 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.63 | 48.0 | 4.91e-01 | 82.4% | 87.7% |
| 3946500 | 306.1.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB › PTS_EIIB | 0.62 | 51.0 | 4.89e-01 | 95.6% | 85.0% |
| 4090346 | 101.1.2.209 ↗ | alpha arrays › HTH › HTH › winged helix domain › MJ1010-like_2nd | 0.62 | 43.0 | 4.50e-01 | 95.6% | 85.0% |
| 3632417 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 45.0 | 4.37e-01 | 79.4% | 97.3% |
| 3386110 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.60 | 48.0 | 4.43e-01 | 91.2% | 72.2% |
| 3713972 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 48.0 | 4.20e-01 | 97.1% | 69.6% |
| 3255880 | 101.1.2.511 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI, PF26569 | 0.59 | 44.0 | 3.73e-01 | 79.4% | 54.5% |
| 5035866 | 101.1.2.913 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Lhr | 0.59 | 50.0 | 4.49e-01 | 100.0% | 84.0% |
| 4940184 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 48.0 | 4.68e-01 | 97.1% | 87.5% |
| 3206236 | 101.1.2.520 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7779 | 0.59 | 48.0 | 4.43e-01 | 95.6% | 75.8% |
| 4008135 | 306.1.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB › PTS_EIIB | 0.58 | 47.0 | 4.42e-01 | 95.6% | 76.7% |
| 4017959 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 43.0 | 2.72e-01 | 79.4% | 17.0% |
| 3802943 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.58 | 44.0 | 4.45e-01 | 83.8% | 87.1% |
| 5079289 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 4.27e-01 | 95.6% | 63.8% |
| 4185571 | 306.1.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB | 0.58 | 47.0 | 4.71e-01 | 94.1% | 95.7% |
| 5061613 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 45.0 | 4.25e-01 | 88.2% | 91.8% |
| 3610270 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 42.0 | 2.63e-01 | 79.4% | 14.8% |
| 3706057 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.57 | 42.0 | 3.34e-01 | 79.4% | 41.4% |
| 4129894 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.57 | 40.0 | 3.42e-01 | 75.0% | 96.5% |
| 5019593 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 47.0 | 4.46e-01 | 95.6% | 84.7% |
| 4990495 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.57 | 42.0 | 4.30e-01 | 82.4% | 86.2% |
| 4011979 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 46.0 | 3.89e-01 | 95.6% | 53.6% |
| 3584449 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.56 | 41.0 | 3.97e-01 | 79.4% | 75.0% |
| 5053725 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 43.0 | 3.95e-01 | 94.1% | 63.3% |
| 4968340 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 44.0 | 4.15e-01 | 92.6% | 84.4% |
| 5056954 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.56 | 45.0 | 4.45e-01 | 95.6% | 96.0% |
| 4958945 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 46.0 | 3.78e-01 | 95.6% | 58.5% |
| 3242401 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 44.0 | 4.06e-01 | 92.6% | 78.9% |
| 3608461 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 4.13e-01 | 79.4% | 84.6% |
| 5049535 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 44.0 | 4.25e-01 | 94.1% | 77.5% |
| 3974773 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 45.0 | 4.01e-01 | 95.6% | 82.9% |
| 4586962 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.55 | 45.0 | 3.86e-01 | 95.6% | 72.5% |
| 4928633 | 101.1.2.18 ↗ | alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e | 0.55 | 44.0 | 3.95e-01 | 94.1% | 77.1% |
| None | — | 0.54 | 39.0 | 3.45e-01 | 79.4% | 74.5% | |
| 4931665 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 43.0 | 4.25e-01 | 94.1% | 90.7% |
| 5009770 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.54 | 42.0 | 4.11e-01 | 92.6% | 87.5% |
| 3598016 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 39.0 | 3.79e-01 | 80.9% | 80.0% |
| 3620820 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 43.0 | 3.50e-01 | 94.1% | 50.3% |
| 4002798 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.53 | 42.0 | 4.16e-01 | 89.7% | 90.0% |
| 3307139 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.53 | 43.0 | 3.58e-01 | 95.6% | 56.2% |
| 4940863 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 39.0 | 3.77e-01 | 85.3% | 73.5% |
| 3237702 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 3.96e-01 | 94.1% | 77.6% |
| 3358714 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 2.67e-01 | 95.6% | 17.2% |
| 2387843 | 101.1.21.0 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase | 0.52 | 41.0 | 3.45e-01 | 88.2% | 51.2% |
| 3384077 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.51 | 41.0 | 3.85e-01 | 95.6% | 78.9% |
D2
high
residues 83-257
Domain cluster:
rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05175.21 best | MTS | 35.3 | 1.20e-08 | 80.6% | 73.4% |
D3
high
residues 268-324
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 54.0 | 5.50e-01 | 96.5% | 94.6% |
| 3obfA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.65 | 51.0 | 3.64e-01 | 93.0% | 28.4% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.64 | 44.0 | 3.47e-01 | 71.9% | 55.6% |
| 2lyiA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.59 | 49.0 | 3.74e-01 | 96.5% | 88.5% |
| 3d5lA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 4.66e-01 | 89.5% | 96.2% |
| 2fdrA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 48.0 | 4.62e-01 | 98.2% | 86.6% |
| 2i7gB00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.57 | 47.0 | 2.91e-01 | 93.0% | 17.1% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 34.0 | 2.91e-01 | 91.2% | 38.0% |
| 3lqhA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.56 | 43.0 | 3.59e-01 | 86.0% | 74.5% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.54 | 44.0 | 4.05e-01 | 89.5% | 74.3% |
| 3bulA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.52 | 45.0 | 3.98e-01 | 100.0% | 73.6% |
| 4p3fA00 | 1.10.3450.40 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain | 0.52 | 43.0 | 3.07e-01 | 100.0% | 38.9% |
| 1nv8B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.51 | 35.0 | 3.36e-01 | 77.2% | 59.2% |
| 6h9xA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.51 | 37.0 | 3.15e-01 | 80.7% | 96.1% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.50 | 38.0 | 3.32e-01 | 78.9% | 88.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3169408 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.69 | 58.0 | 5.55e-01 | 100.0% | 82.9% |
| 3925313 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.69 | 53.0 | 4.79e-01 | 86.0% | 75.0% |
| 4996581 | 101.1.2.750 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27374 | 0.68 | 58.0 | 4.71e-01 | 100.0% | 71.3% |
| 5022018 | 4973.1.1.0 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core | 0.65 | 51.0 | 4.94e-01 | 100.0% | 77.1% |
| 4854270 | 141.1.1.2 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › SQS_PSY | 0.60 | 43.0 | 2.86e-01 | 80.7% | 31.6% |
| 3673670 | 639.2.1.4 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › Ovate | 0.59 | 50.0 | 4.85e-01 | 100.0% | 89.2% |
| 4290529 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.59 | 45.0 | 3.68e-01 | 84.2% | 65.5% |
| 3060781 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.58 | 40.0 | 3.08e-01 | 100.0% | 30.1% |
| 4939150 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.56 | 38.0 | 3.54e-01 | 71.9% | 76.0% |
| 3668652 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.55 | 38.0 | 3.54e-01 | 73.7% | 74.7% |
| 3982032 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.54 | 34.0 | 3.07e-01 | 77.2% | 45.0% |