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KU160495.1__ALY08002.1__EauS123_00003__00003
Bact-VirKU160495.1__ALY08002.1__EauS123_00003__00003
Identity
- Accession:
- KU160495 ↗
- Kingdom:
- phage
Quality
77.5
mean pLDDT
Taxonomy
TaxID: 1775141
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-114
Domain cluster:
rep: HQ225832.1__ADX42580.1__X__00060__D4-108
D2
high
residues 170-265
Domain cluster:
rep: KX190833.1__ANT39973.1__BMBtpLA2_13__00013__D225-313
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07261.17 best | DnaB_2 | 50.2 | 2.50e-13 | 72.9% | 89.2% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i5uA00 | 1.10.10.630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like | 0.92 | 64.0 | 7.09e-01 | 70.8% | 100.0% |
| 2zc2A00 | 1.10.10.630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like | 0.86 | 63.0 | 7.03e-01 | 76.0% | 100.0% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 47.0 | 5.04e-01 | 77.1% | 90.4% |
| 4ye6A01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.65 | 49.0 | 4.78e-01 | 85.4% | 74.0% |
| 3jsbA01 | 1.20.1440.300 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain | 0.57 | 35.0 | 3.85e-01 | 93.8% | 74.1% |
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.54 | 36.0 | 3.22e-01 | 93.8% | 50.4% |
| 3ptwA01 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.52 | 40.0 | 3.11e-01 | 87.5% | 68.3% |
| 1k32A03 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.51 | 34.0 | 3.89e-01 | 75.0% | 91.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587918 | 4230.1.1.3 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 | 0.94 | 87.0 | 8.77e-01 | 96.9% | 100.0% |
| 3989035 | 4230.1.1.3 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 | 0.93 | 79.0 | 7.97e-01 | 88.5% | 91.6% |
| 4498620 | 4230.1.1.3 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 | 0.92 | 64.0 | 7.53e-01 | 71.9% | 100.0% |
| 4048400 | 4230.1.1.3 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 | 0.90 | 74.0 | 7.88e-01 | 85.4% | 97.6% |
| 4995693 | 4230.1.1.0 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain | 0.75 | 51.0 | 5.75e-01 | 70.8% | 92.0% |
| 5072366 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.58 | 42.0 | 3.16e-01 | 77.1% | 65.1% |