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KU160673.1__ALY10888.1__WILDE_108__00108

Bact-Vir

KU160673.1__ALY10888.1__WILDE_108__00108

Identity

Accession:
KU160673 ↗
Kingdom:
phage

Quality

68.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Tankvirus› Arthrobacter_phage_Wilde

TaxID: 1772323

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-72
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.70 49.0 4.87e-01 81.0% 69.7%
6dewA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 52.0 3.71e-01 95.2% 28.9%
2di3B02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.63 53.0 4.12e-01 100.0% 58.1%
1sxjE03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.62 46.0 3.97e-01 77.8% 93.8%
3zssA02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.62 51.0 4.78e-01 93.7% 94.9%
3he0B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 44.0 3.26e-01 100.0% 27.5%
2j9wB00 1.20.120.1130 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain 0.59 49.0 4.40e-01 100.0% 92.9%
3zdmB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.58 41.0 4.51e-01 84.1% 96.0%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.58 43.0 4.03e-01 100.0% 64.6%
5ez1A01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 45.0 3.92e-01 87.3% 77.0%
3llkA01 1.20.120.1960 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain 0.55 45.0 4.02e-01 96.8% 86.7%
1o82A00 1.20.225.10 Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 0.53 42.0 4.20e-01 96.8% 97.1%
1vw4L02 1.10.246.170 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.53 38.0 3.52e-01 96.8% 58.8%
3s63A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.52 42.0 3.85e-01 93.7% 87.5%
7zm7601 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.51 43.0 3.30e-01 100.0% 64.7%
6hxpA01 1.10.230.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 0.50 41.0 3.56e-01 90.5% 97.0%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3453253 509.1.1.9 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH_ZNF598 0.76 51.0 4.41e-01 85.7% 46.3%
3737312 509.1.1.1 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH 0.74 53.0 4.97e-01 74.6% 62.7%
3215887 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.73 51.0 4.84e-01 79.4% 61.3%
3419853 192.29.1.19 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Cornichon 0.70 63.0 4.81e-01 100.0% 69.7%
3808658 509.1.1.1 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH 0.69 51.0 4.37e-01 77.8% 52.6%
3942571 101.1.1.198 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KorB 0.65 46.0 4.56e-01 87.3% 72.3%
3273387 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 45.0 2.91e-01 74.6% 16.6%
3604193 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.61 39.0 3.00e-01 98.4% 27.6%
3722642 131.2.1.0 ↗ alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like 0.61 43.0 2.80e-01 98.4% 15.7%
3224157 633.16.1.0 ↗ alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like 0.61 43.0 4.00e-01 74.6% 71.2%
5050940 218.5.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Uncharacterized protein › Uncharacterized protein › DUF1116 0.61 51.0 3.56e-01 100.0% 93.6%
3838730 563.1.1.1 ↗ alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.60 51.0 3.81e-01 100.0% 46.3%
3787094 601.1.1.142 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Peptidase_S64, PF30502 0.60 52.0 3.68e-01 93.7% 89.4%
3948771 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 45.0 4.27e-01 90.5% 74.7%
3275929 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.56 47.0 3.83e-01 100.0% 53.1%
3998718 198.1.1.1 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.53 45.0 4.20e-01 96.8% 96.2%
3269593 198.1.1.2 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.50 43.0 4.01e-01 100.0% 96.2%