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KU197014.1__AMW36185.1__X__00071
Bact-VirKU197014.1__AMW36185.1__X__00071
Identity
- Accession:
- KU197014 ↗
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Taxonomy
TaxID: 1775249
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-86
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 50.0 | 4.92e-01 | 100.0% | 72.0% |
| 1m0sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 43.0 | 4.42e-01 | 98.6% | 69.4% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 43.0 | 4.26e-01 | 93.2% | 65.0% |
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.59 | 42.0 | 4.02e-01 | 100.0% | 64.0% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 39.0 | 3.74e-01 | 91.9% | 58.4% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 40.0 | 4.04e-01 | 97.3% | 70.7% |
| 2vs7A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 38.0 | 3.81e-01 | 100.0% | 67.9% |
| 6gmhK00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.56 | 39.0 | 3.48e-01 | 100.0% | 48.7% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 36.0 | 3.36e-01 | 87.8% | 52.2% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.55 | 37.0 | 3.59e-01 | 94.6% | 60.0% |
| 2di8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 3.58e-01 | 100.0% | 57.4% |
| 4aybL00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.55 | 38.0 | 3.63e-01 | 100.0% | 60.4% |
| 2f8mA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 42.0 | 4.16e-01 | 98.6% | 79.7% |
| 1l3lA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.55 | 47.0 | 3.70e-01 | 100.0% | 64.1% |
| 3w1oA00 | 3.40.1760.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › | 0.54 | 41.0 | 3.57e-01 | 81.1% | 93.9% |
| 3bm1A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.54 | 41.0 | 3.26e-01 | 86.5% | 72.9% |
| 6lpwA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 46.0 | 3.42e-01 | 98.6% | 92.9% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.53 | 34.0 | 3.01e-01 | 89.2% | 40.5% |
| 3ix3A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 45.0 | 3.60e-01 | 100.0% | 67.5% |
| 2h84A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 43.0 | 3.49e-01 | 91.9% | 98.0% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.67e-01 | 100.0% | 62.0% |
| 4hw8A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 40.0 | 3.13e-01 | 86.5% | 71.0% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 33.0 | 3.13e-01 | 87.8% | 51.1% |
| 4d53A00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.52 | 46.0 | 3.80e-01 | 100.0% | 88.7% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 35.0 | 3.61e-01 | 98.6% | 77.6% |
| 4ne4A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 44.0 | 3.46e-01 | 100.0% | 57.5% |
| 5l09B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.51 | 43.0 | 3.47e-01 | 100.0% | 67.7% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 38.0 | 2.77e-01 | 79.7% | 94.5% |
| 3njcA00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.51 | 40.0 | 3.24e-01 | 89.2% | 42.5% |
| 3quwA00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.51 | 42.0 | 3.61e-01 | 94.6% | 81.6% |
| 2op5B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 38.0 | 3.47e-01 | 91.9% | 61.0% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3175958 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 46.0 | 4.29e-01 | 94.6% | 57.8% |
| 3259623 | 7516.1.1.7 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › UDPGP | 0.63 | 45.0 | 2.86e-01 | 78.4% | 88.2% |
| 3609138 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 46.0 | 4.04e-01 | 98.6% | 53.6% |
| 4666632 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 46.0 | 4.16e-01 | 93.2% | 59.0% |
| 4980881 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 37.0 | 3.60e-01 | 87.8% | 52.9% |
| 3647625 | 7581.1.1.39 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C, FAE1_CUT1_RppA | 0.60 | 42.0 | 3.11e-01 | 74.3% | 95.1% |
| 3444134 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.57 | 40.0 | 3.77e-01 | 95.9% | 60.0% |
| 4279545 | 306.9.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › MecA substrate binding domain › MecA substrate binding domain › MecA | 0.57 | 50.0 | 4.93e-01 | 100.0% | 93.8% |
| 3760105 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.57 | 48.0 | 4.14e-01 | 93.2% | 61.7% |
| 3904001 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 47.0 | 4.47e-01 | 100.0% | 76.7% |
| 4941642 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.55 | 42.0 | 2.68e-01 | 82.4% | 71.1% |
| 3269660 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.55 | 47.0 | 3.74e-01 | 100.0% | 45.6% |
| 5023383 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.55 | 48.0 | 4.07e-01 | 100.0% | 65.6% |
| 5077552 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.54 | 43.0 | 4.04e-01 | 100.0% | 69.5% |
| 3502632 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.54 | 43.0 | 2.87e-01 | 100.0% | 21.3% |
| 5084002 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.53 | 45.0 | 3.80e-01 | 100.0% | 54.8% |
| 3604508 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.53 | 41.0 | 3.85e-01 | 100.0% | 68.9% |
| 3361668 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.53 | 36.0 | 2.73e-01 | 77.0% | 29.7% |
| 3821893 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.53 | 36.0 | 2.77e-01 | 70.3% | 43.4% |
| 5034637 | 305.1.1.2 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 | 0.52 | 37.0 | 3.63e-01 | 100.0% | 68.8% |
| 3973541 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 35.0 | 3.25e-01 | 89.2% | 53.7% |
| 3479414 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.52 | 44.0 | 3.56e-01 | 100.0% | 47.5% |
| 3704411 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.52 | 38.0 | 2.94e-01 | 79.7% | 89.2% |
| 3592416 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.51 | 44.0 | 3.99e-01 | 97.3% | 70.5% |
| 2067736 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 36.0 | 3.42e-01 | 93.2% | 61.1% |