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KU234532.1__AND75515.1__X__00028

Bact-Vir

KU234532.1__AND75515.1__X__00028

Identity

Accession:
KU234532 ↗
Kingdom:
phage

Quality

86.4 mean pLDDT

Taxonomy

TaxID: 1775255

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 56-106
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.94 76.0 7.78e-01 100.0% 89.8%
5dqqA01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.89 68.0 4.90e-01 100.0% 32.0%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.87 73.0 5.73e-01 90.2% 97.0%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.86 78.0 7.23e-01 100.0% 84.4%
3wd6A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.85 75.0 5.70e-01 100.0% 44.1%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 73.0 4.88e-01 96.1% 26.3%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.84 76.0 7.05e-01 100.0% 85.9%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.84 75.0 5.57e-01 100.0% 44.8%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.83 74.0 6.45e-01 100.0% 71.4%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.83 75.0 5.70e-01 100.0% 44.7%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.82 73.0 7.06e-01 100.0% 87.9%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.82 74.0 6.15e-01 100.0% 62.8%
3k3oA02 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 69.0 5.78e-01 94.1% 65.5%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.78 61.0 6.13e-01 94.1% 86.3%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 65.0 5.75e-01 100.0% 73.4%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.76 64.0 4.82e-01 90.2% 39.3%
1y74A00 1.10.287.650 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain 0.76 61.0 5.92e-01 88.2% 78.9%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.75 66.0 5.10e-01 96.1% 45.9%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 61.0 5.11e-01 100.0% 51.1%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.75 63.0 3.94e-01 100.0% 98.1%
4d6wB02 6.10.140.740 Special › Helix non-globular › Helix Hairpins › 0.75 65.0 5.30e-01 96.1% 57.6%
1lujB01 1.10.10.490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT 0.75 54.0 5.38e-01 78.4% 75.5%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.74 63.0 6.06e-01 100.0% 86.9%
4dnnA00 1.20.5.4010 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.73 58.0 5.90e-01 86.3% 100.0%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.73 58.0 5.02e-01 98.0% 55.3%
4f92B10 1.10.3380.10 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain 0.73 57.0 4.12e-01 86.3% 34.3%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.73 57.0 4.46e-01 90.2% 43.6%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.72 54.0 5.13e-01 84.3% 67.7%
2ycdA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.72 61.0 4.78e-01 100.0% 57.3%
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.72 62.0 5.23e-01 100.0% 77.3%
2kz6A01 6.10.140.1310 Special › Helix non-globular › Helix Hairpins › 0.71 54.0 4.76e-01 86.3% 59.3%
2qm8A03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.71 47.0 4.33e-01 72.5% 53.8%
6t0bc01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.71 59.0 5.20e-01 100.0% 62.8%
3juiA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.70 63.0 4.31e-01 100.0% 60.3%
5c9eB01 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.70 54.0 4.59e-01 88.2% 50.6%
8kcaB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 47.0 3.25e-01 72.5% 21.1%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.68 59.0 4.57e-01 96.1% 48.6%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.68 58.0 5.48e-01 96.1% 83.6%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.68 60.0 4.27e-01 96.1% 35.0%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.67 58.0 4.59e-01 100.0% 47.3%
4finB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 59.0 3.67e-01 98.0% 23.5%
5tprA02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.67 56.0 3.75e-01 96.1% 95.8%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.67 56.0 4.79e-01 98.0% 62.1%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.66 57.0 4.49e-01 98.0% 46.7%
4ofzA01 1.20.58.1800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 57.0 4.42e-01 98.0% 57.5%
4jvyB00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.65 48.0 3.38e-01 90.2% 23.2%
4bpxD00 1.20.930.80 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.65 58.0 3.77e-01 100.0% 27.2%
3nkuA00 1.10.357.170 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › 0.64 55.0 3.84e-01 100.0% 65.3%
2pbiA02 1.10.1240.60 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.63 55.0 4.36e-01 96.1% 79.2%
2mpnA00 6.10.140.1340 Special › Helix non-globular › Helix Hairpins › 0.63 53.0 4.92e-01 100.0% 80.9%
2cr7A01 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.61 45.0 4.25e-01 82.4% 65.1%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.59 45.0 4.31e-01 92.2% 72.3%
1wgwA00 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.59 48.0 3.94e-01 94.1% 86.9%
3i2fA02 1.10.3020.10 Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) 0.58 47.0 3.85e-01 90.2% 47.4%
2kkmA01 1.20.1440.170 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Translation machinery-associated protein 16-like 0.55 44.0 3.53e-01 100.0% 71.2%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3380124 109.4.1.1266 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm, ARM_PUB 0.92 84.0 4.89e-01 98.0% 13.7%
3914846 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.92 85.0 5.98e-01 100.0% 36.4%
3260684 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.91 83.0 8.14e-01 100.0% 92.7%
3295707 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.91 68.0 7.55e-01 78.4% 100.0%
3783055 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.90 83.0 6.27e-01 100.0% 46.4%
3754639 150.5.1.106 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › LIN9_C 0.89 82.0 6.75e-01 100.0% 64.7%
3928221 4.1.1.310 beta barrels › SH3 › SH3 › SH3 › PF26050 0.89 79.0 5.51e-01 94.1% 35.0%
3840952 601.19.1.39 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › LIN9_C 0.87 79.0 6.89e-01 100.0% 73.3%
3700089 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.86 58.0 5.33e-01 72.5% 55.4%
3355246 192.1.1.0 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.85 77.0 6.56e-01 100.0% 67.5%
3185917 375.1.9.12 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › Wbp11 0.85 75.0 6.18e-01 96.1% 56.5%
3681881 192.29.1.46 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF1110 0.85 77.0 5.28e-01 100.0% 37.0%
4015612 616.1.1.0 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.85 75.0 6.15e-01 96.1% 56.5%
4106620 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.84 75.0 6.58e-01 100.0% 73.3%
4384067 632.7.1.37 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › LETM1_RBD 0.84 76.0 5.82e-01 100.0% 46.4%
3477418 4992.1.1.12 extended segments › RelB-like › RelB-like › RelB-like › LIN9_C 0.84 71.0 5.69e-01 92.2% 85.3%
4971062 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.83 74.0 6.20e-01 100.0% 60.0%
2485668 7025.1.1.2 alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9_C 0.82 71.0 5.95e-01 96.1% 98.8%
3628421 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.82 72.0 5.22e-01 100.0% 36.4%
3250375 192.1.1.0 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.81 73.0 6.40e-01 100.0% 68.0%
4042824 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.81 72.0 6.20e-01 100.0% 63.7%
3287947 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.81 71.0 5.88e-01 100.0% 61.1%
3844040 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.81 72.0 6.66e-01 100.0% 80.0%
3583169 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.80 70.0 6.08e-01 100.0% 63.7%
3314803 632.7.1.37 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › LETM1_RBD 0.79 70.0 5.31e-01 100.0% 42.5%
3379868 148.1.3.277 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › LETM1_RBD 0.79 69.0 5.99e-01 100.0% 65.0%
4990618 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.79 63.0 4.46e-01 90.2% 29.0%
3928795 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.79 70.0 5.69e-01 100.0% 55.8%
4396754 4336.1.1.1 alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.79 66.0 5.12e-01 96.1% 44.3%
3629808 3291.1.1.130 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › CHDCT2 0.78 69.0 5.73e-01 100.0% 61.1%
4926921 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.78 68.0 5.69e-01 100.0% 57.8%
3289545 150.8.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE 0.78 68.0 4.58e-01 98.0% 28.4%
4007679 192.15.1.109 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Caudo_TAP 0.78 67.0 5.94e-01 100.0% 67.6%
3341807 604.3.1.1 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.76 67.0 5.24e-01 100.0% 61.8%
3203010 605.1.1.139 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › LETM1_RBD 0.76 66.0 5.32e-01 100.0% 52.0%
3600071 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.75 60.0 5.56e-01 90.2% 69.2%
3725456 604.3.1.24 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF27980 0.75 64.0 5.48e-01 100.0% 62.4%
3988447 5043.1.1.0 extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like 0.75 63.0 6.13e-01 90.2% 85.5%
5039692 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.75 62.0 4.99e-01 90.2% 50.5%
3638546 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.75 63.0 4.15e-01 100.0% 24.3%
3497418 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.75 66.0 5.31e-01 100.0% 73.0%
4508282 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.74 67.0 4.61e-01 100.0% 71.9%
3691750 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.73 65.0 4.57e-01 96.1% 33.6%
3784566 604.1.1.191 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF29057 0.73 62.0 5.10e-01 100.0% 53.0%
3430567 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.73 63.0 5.98e-01 98.0% 86.7%
4992004 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.72 61.0 5.04e-01 98.0% 53.7%
3276887 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.72 59.0 4.74e-01 100.0% 44.3%
4493879 4992.1.1.23 extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.71 59.0 4.77e-01 100.0% 58.2%
4209030 4336.1.1.1 alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.70 57.0 4.50e-01 94.1% 44.7%
2992201 6171.1.1.1 alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD 0.70 56.0 4.41e-01 90.2% 42.7%
5083776 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.69 57.0 4.83e-01 100.0% 53.7%
3236694 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.69 59.0 4.39e-01 100.0% 71.4%
3780286 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.68 57.0 3.28e-01 100.0% 9.0%
5033293 3615.1.1.0 alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.66 56.0 4.20e-01 100.0% 36.4%