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KU234533.1__AND75601.1__X__00025
Bact-VirKU234533.1__AND75601.1__X__00025
Identity
- Accession:
- KU234533 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-89
Domain cluster:
rep: ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00132__D29-77_93-127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04717.19 best | Phage_base_V | 32.1 | 1.70e-07 | 82.6% | 94.7% |
D2
medium
residues 174-247
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8gzhC01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.59 | 44.0 | 3.40e-01 | 81.1% | 50.3% |
| 3gw6F01 | 4.10.1090.10 | Few Secondary Structures › Irregular › Endosialidase, domain 4 › Endosialidase, domain 4 | 0.59 | 44.0 | 4.15e-01 | 82.4% | 82.8% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.55 | 47.0 | 3.80e-01 | 100.0% | 58.0% |
| 3bb7A01 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.52 | 38.0 | 2.96e-01 | 79.7% | 63.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995814 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.83 | 60.0 | 4.58e-01 | 78.4% | 35.0% |
| 3166373 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.67 | 49.0 | 4.81e-01 | 77.0% | 75.0% |
| 2559748 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.66 | 60.0 | 4.59e-01 | 98.6% | 55.6% |
| 3981434 | 79.1.1.15 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Apex | 0.60 | 47.0 | 4.28e-01 | 85.1% | 64.0% |
| 3977312 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.59 | 49.0 | 3.88e-01 | 98.6% | 43.9% |
| 3946712 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.59 | 48.0 | 4.68e-01 | 87.8% | 81.2% |
| 3504473 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.57 | 49.0 | 3.77e-01 | 98.6% | 58.3% |
| 234248 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.54 | 46.0 | 4.17e-01 | 98.6% | 73.6% |
| 1199935 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.52 | 36.0 | 2.76e-01 | 71.6% | 63.1% |
| 2968925 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.51 | 35.0 | 2.26e-01 | 70.3% | 41.3% |
| 3692276 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.51 | 40.0 | 2.82e-01 | 83.8% | 60.9% |
| 1731198 | 79.1.1.13 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp5_trimer_C | 0.51 | 43.0 | 3.27e-01 | 97.3% | 49.7% |