←Back to structures
KU253712.1__AMB18796.1__Eldridge_0216__00213
Bact-VirKU253712.1__AMB18796.1__Eldridge_0216__00213
Identity
- Accession:
- KU253712 ↗
- Kingdom:
- phage
Quality
76.9
mean pLDDT
Taxonomy
TaxID: 1776293
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-94
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.63 | 53.0 | 4.31e-01 | 92.2% | 68.2% |
| 2nwvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.63 | 45.0 | 4.18e-01 | 74.4% | 63.4% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.63 | 45.0 | 3.27e-01 | 74.4% | 30.6% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.62 | 43.0 | 3.62e-01 | 76.7% | 41.1% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 42.0 | 4.12e-01 | 71.1% | 78.4% |
| 2x3fA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.61 | 43.0 | 4.22e-01 | 75.6% | 85.0% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 44.0 | 2.91e-01 | 77.8% | 28.9% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.59 | 39.0 | 4.42e-01 | 72.2% | 95.2% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.59 | 43.0 | 2.95e-01 | 77.8% | 26.9% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 43.0 | 2.94e-01 | 78.9% | 24.5% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 43.0 | 2.94e-01 | 78.9% | 25.2% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 41.0 | 2.78e-01 | 77.8% | 24.9% |
| 2mnjB00 | 2.60.40.4160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 39.0 | 3.96e-01 | 83.3% | 73.9% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 40.0 | 2.78e-01 | 77.8% | 30.8% |
| 3o8eD02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.55 | 35.0 | 4.04e-01 | 80.0% | 96.7% |
| 5ce6A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.55 | 47.0 | 3.44e-01 | 97.8% | 49.6% |
| 5e5bA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.54 | 44.0 | 3.32e-01 | 93.3% | 48.8% |
| 4s3nA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 43.0 | 3.69e-01 | 86.7% | 78.9% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.93e-01 | 74.4% | 85.1% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 40.0 | 2.71e-01 | 78.9% | 24.7% |
| 4xvcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 46.0 | 3.28e-01 | 98.9% | 94.6% |
| 4g5aA00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 4.01e-01 | 83.3% | 84.8% |
| 2gx9A00 | 3.30.420.330 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain | 0.53 | 39.0 | 3.53e-01 | 81.1% | 56.3% |
| 1nyeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.53 | 38.0 | 3.34e-01 | 77.8% | 62.2% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 44.0 | 3.46e-01 | 90.0% | 77.8% |
| 5x7qA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.53 | 40.0 | 2.97e-01 | 80.0% | 85.0% |
| 1mkeA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.27e-01 | 76.7% | 77.1% |
| 3sxxC01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 39.0 | 3.83e-01 | 82.2% | 93.1% |
| 4ci8A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 38.0 | 2.63e-01 | 77.8% | 28.1% |
| 2mhdA00 | 2.40.128.370 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 40.0 | 3.76e-01 | 85.6% | 71.8% |
| 3v8uA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 35.0 | 3.59e-01 | 93.3% | 74.4% |
| 4jhyA00 | 3.30.530.80 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.50 | 45.0 | 3.78e-01 | 100.0% | 62.8% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.50 | 37.0 | 3.28e-01 | 78.9% | 94.0% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 38.0 | 3.81e-01 | 96.7% | 83.1% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3282694 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.69 | 48.0 | 4.80e-01 | 73.3% | 98.9% |
| 4996248 | 331.19.1.0 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains | 0.62 | 48.0 | 4.89e-01 | 100.0% | 83.3% |
| 4016769 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.60 | 54.0 | 4.15e-01 | 100.0% | 87.2% |
| 3975056 | 241.13.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA | 0.60 | 49.0 | 4.42e-01 | 92.2% | 84.6% |
| 174442 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.60 | 44.0 | 2.90e-01 | 77.8% | 28.3% |
| 5044805 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 43.0 | 4.75e-01 | 78.9% | 98.6% |
| 182728 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 43.0 | 2.95e-01 | 77.8% | 26.9% |
| 4932458 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 46.0 | 3.20e-01 | 84.4% | 57.3% |
| 5020787 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.59 | 45.0 | 3.74e-01 | 83.3% | 97.6% |
| 3607492 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.58 | 43.0 | 2.79e-01 | 77.8% | 20.7% |
| 1170462 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.58 | 36.0 | 4.20e-01 | 70.0% | 91.8% |
| 3707403 | 5.1.4.382 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF1899, ANAPC4_WD40, WD40_4 | 0.58 | 43.0 | 2.83e-01 | 78.9% | 21.3% |
| 3260943 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 33.0 | 3.68e-01 | 71.1% | 71.4% |
| 3988065 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 40.0 | 4.28e-01 | 75.6% | 86.7% |
| 3635423 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.57 | 52.0 | 4.10e-01 | 100.0% | 85.4% |
| 3965259 | 243.3.1.16 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY_2 | 0.57 | 39.0 | 4.17e-01 | 76.7% | 85.1% |
| None | — | 0.57 | 44.0 | 3.77e-01 | 82.2% | 87.9% | |
| 3179616 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.57 | 42.0 | 2.74e-01 | 77.8% | 21.0% |
| 3590243 | 6044.1.1.1 ↗ | a+b three layers › DUF1827-like › DUF1827-like › DUF1827-like › DUF1827 | 0.57 | 40.0 | 3.84e-01 | 74.4% | 99.0% |
| 3349878 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.56 | 49.0 | 3.82e-01 | 93.3% | 90.8% |
| 3394102 | 3343.1.1.3 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_N_terminal | 0.56 | 47.0 | 2.86e-01 | 93.3% | 24.2% |
| 3415735 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.56 | 42.0 | 4.12e-01 | 77.8% | 100.0% |
| 3585029 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.56 | 42.0 | 2.37e-01 | 77.8% | 94.8% |
| 1684841 | 241.13.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › SopD | 0.55 | 39.0 | 4.00e-01 | 82.2% | 77.6% |
| 4003420 | 3735.1.1.0 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein | 0.55 | 46.0 | 2.55e-01 | 93.3% | 61.9% |
| 3288873 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.55 | 40.0 | 2.71e-01 | 77.8% | 28.9% |
| 3496493 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.54 | 45.0 | 3.63e-01 | 91.1% | 55.0% |
| 3419955 | 5.1.3.207 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40, NBCH_WD40 | 0.54 | 38.0 | 2.64e-01 | 76.7% | 35.4% |
| 3924468 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 40.0 | 2.76e-01 | 80.0% | 22.8% |
| 3198667 | 5.1.4.221 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SGL | 0.53 | 39.0 | 2.70e-01 | 77.8% | 30.6% |
| 4927782 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.53 | 35.0 | 3.99e-01 | 70.0% | 100.0% |
| 5074574 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.53 | 45.0 | 3.35e-01 | 97.8% | 80.8% |
| 3786550 | 5.1.4.219 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N | 0.52 | 37.0 | 2.39e-01 | 77.8% | 14.4% |
| None | — | 0.52 | 45.0 | 3.23e-01 | 100.0% | 91.9% | |
| 5075159 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.52 | 44.0 | 3.67e-01 | 95.6% | 90.3% |
| 3685765 | 5.1.4.221 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SGL | 0.52 | 38.0 | 2.70e-01 | 76.7% | 36.4% |
| 3286894 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.52 | 40.0 | 3.89e-01 | 82.2% | 75.0% |
| 3676177 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 41.0 | 2.83e-01 | 83.3% | 88.4% |
| 3399942 | 9.1.1.49 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 | 0.51 | 37.0 | 3.42e-01 | 76.7% | 76.7% |
| 5040742 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.51 | 44.0 | 3.54e-01 | 97.8% | 90.8% |
| 3178364 | 319.1.1.19 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29696 | 0.51 | 38.0 | 3.67e-01 | 80.0% | 73.3% |
| 3783703 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.51 | 37.0 | 2.57e-01 | 77.8% | 30.4% |
| 3444198 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.50 | 43.0 | 3.45e-01 | 92.2% | 90.8% |
| 1121949 | 9.21.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › hypothetical protein BACUNI_03114 › hypothetical protein BACUNI_03114 › Lipocalin_4 | 0.50 | 40.0 | 3.76e-01 | 85.6% | 71.8% |
| 3712989 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.50 | 35.0 | 2.70e-01 | 70.0% | 40.5% |
| 5074996 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.50 | 43.0 | 3.52e-01 | 95.6% | 89.4% |