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KU310943.1__AMO43607.1__PAEP54_00560__00056

Bact-Vir

KU310943.1__AMO43607.1__PAEP54_00560__00056

Identity

Accession:
KU310943 ↗
Kingdom:
phage

Quality

92.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_YMC11/07/P54_PAE_BP

TaxID: 1777064

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-73
PDB
Domain cluster: rep: NC_030909.1__YP_009273737.1__BH775_gp55__00055__D15-78
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07867.18 best DUF1654 49.5 3.80e-13 94.2% 87.1%
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.74 64.0 6.47e-01 97.1% 100.0%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.72 59.0 5.79e-01 92.8% 81.3%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.72 59.0 5.97e-01 88.4% 89.7%
3zihA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.71 58.0 5.56e-01 89.9% 77.2%
3p04A00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.70 56.0 5.45e-01 88.4% 79.2%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.70 48.0 4.08e-01 88.4% 45.4%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 5.38e-01 95.7% 70.2%
2hnkA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 57.0 3.99e-01 92.8% 32.8%
3pieA02 3.30.1370.250 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.67 59.0 5.29e-01 100.0% 76.0%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.67 54.0 5.10e-01 88.4% 76.8%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.66 54.0 5.21e-01 92.8% 79.5%
1nrwA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.66 52.0 4.24e-01 85.5% 91.5%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 5.34e-01 98.6% 100.0%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 5.44e-01 98.6% 100.0%
2wk1A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 56.0 3.88e-01 100.0% 54.1%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.64 50.0 4.47e-01 87.0% 88.1%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.63 39.0 3.13e-01 82.6% 31.3%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 4.81e-01 89.9% 76.2%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 48.0 4.58e-01 87.0% 70.9%
4oloB00 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.63 50.0 4.68e-01 87.0% 71.4%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.62 51.0 4.42e-01 89.9% 86.8%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.78e-01 98.6% 69.8%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 42.0 3.80e-01 71.0% 80.4%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 55.0 5.36e-01 100.0% 94.7%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.61 41.0 3.42e-01 71.0% 61.7%
2yvsA02 3.30.70.2560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 36.0 3.87e-01 87.0% 69.5%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 5.14e-01 98.6% 100.0%
7npaA02 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 42.0 3.98e-01 73.9% 67.1%
2joeA01 3.30.1830.10 Alpha Beta › 2-Layer Sandwich › YehR-like fold › YehR-like 0.60 45.0 3.74e-01 82.6% 56.2%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 47.0 4.31e-01 94.2% 65.6%
1xkpC00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 41.0 3.49e-01 73.9% 53.2%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 47.0 4.26e-01 89.9% 63.4%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 47.0 4.46e-01 89.9% 78.8%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.59 40.0 4.08e-01 73.9% 70.6%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 4.02e-01 91.3% 53.0%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 41.0 3.69e-01 72.5% 80.6%
2b30A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.59 47.0 4.13e-01 89.9% 87.2%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 43.0 4.11e-01 85.5% 65.9%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.57e-01 97.1% 76.1%
3tu3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 41.0 3.51e-01 73.9% 52.1%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 40.0 3.51e-01 71.0% 69.4%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.03e-01 89.9% 57.7%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 3.74e-01 89.9% 43.6%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 47.0 4.28e-01 89.9% 75.8%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 4.28e-01 95.7% 73.8%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 50.0 4.29e-01 98.6% 69.3%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.71e-01 89.9% 100.0%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 49.0 4.73e-01 95.7% 84.6%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 50.0 3.72e-01 100.0% 51.6%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.58 46.0 4.11e-01 85.5% 77.9%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.58 44.0 4.44e-01 87.0% 85.9%
3aqpA02 3.30.70.3220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 44.0 3.42e-01 84.1% 78.1%
2v4jB01 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 39.0 3.17e-01 73.9% 37.1%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 3.73e-01 94.2% 47.9%
3cuqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.48e-01 97.1% 97.5%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 4.32e-01 91.3% 78.2%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 46.0 3.65e-01 97.1% 41.7%
2cqiA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 42.0 3.70e-01 84.1% 54.4%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.44e-01 95.7% 78.6%
5tvfD00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.56 45.0 3.10e-01 92.8% 29.3%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 4.25e-01 94.2% 80.9%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 3.85e-01 89.9% 61.6%
7x0fA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.54 38.0 3.03e-01 75.4% 98.6%
3to8A02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 41.0 3.70e-01 84.1% 59.4%
2a07J00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 4.40e-01 98.6% 89.2%
2x7gA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 42.0 4.00e-01 89.9% 75.0%
2i4lA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 45.0 2.95e-01 95.7% 34.7%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 4.10e-01 91.3% 82.9%
4zxhA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.53 38.0 2.93e-01 78.3% 88.5%
2nwuB01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.52 35.0 2.93e-01 95.7% 37.3%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 44.0 4.49e-01 98.6% 97.1%
2m9kA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 39.0 3.65e-01 88.4% 63.4%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.52 41.0 3.52e-01 89.9% 61.0%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 4.06e-01 100.0% 82.9%
1i72A00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.51 39.0 2.76e-01 89.9% 24.3%
1x5oA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 39.0 3.73e-01 88.4% 73.3%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 45.0 4.11e-01 98.6% 80.9%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3970499 320.2.1.3 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › DUF1654 0.95 87.0 8.70e-01 95.7% 94.3%
1165035 320.1.1.2 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › HP1451_C 0.74 64.0 6.53e-01 98.6% 100.0%
4357374 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.73 60.0 6.15e-01 87.0% 93.8%
4126441 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.73 59.0 6.29e-01 87.0% 100.0%
4583415 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.72 61.0 5.99e-01 92.8% 84.0%
4602133 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.72 62.0 6.03e-01 92.8% 85.3%
4027999 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.71 60.0 5.65e-01 100.0% 77.6%
5055166 328.1.1.0 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like 0.70 55.0 5.55e-01 92.8% 87.1%
3370400 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 5.81e-01 100.0% 92.9%
3683636 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.69 61.0 5.96e-01 100.0% 92.2%
3592987 320.4.1.0 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain 0.68 59.0 5.01e-01 100.0% 60.0%
3561915 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.68 56.0 5.51e-01 97.1% 85.3%
3704940 320.4.1.3 ↗ a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB 0.68 58.0 4.94e-01 100.0% 60.0%
4943581 328.4.1.0 ↗ a+b two layers › IF3-like › YhbY-like › YhbY-like 0.67 54.0 5.20e-01 92.8% 77.5%
3716821 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.67 55.0 5.36e-01 91.3% 96.0%
4930880 328.1.1.0 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like 0.67 53.0 5.33e-01 94.2% 87.1%
3578925 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.67 58.0 5.13e-01 100.0% 71.4%
3735293 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.67 57.0 3.94e-01 100.0% 35.0%
3780948 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 57.0 5.12e-01 100.0% 70.0%
5074997 328.7.1.0 ↗ a+b two layers › IF3-like › Smr domain › Smr domain 0.66 51.0 5.04e-01 92.8% 80.0%
3871908 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 57.0 4.91e-01 100.0% 65.5%
3416416 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.66 57.0 5.03e-01 100.0% 70.5%
4993809 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.66 53.0 4.68e-01 89.9% 61.0%
3657448 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 57.0 4.61e-01 100.0% 58.6%
4979496 328.9.1.0 ↗ a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.65 50.0 5.11e-01 89.9% 89.2%
4228350 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.65 53.0 5.41e-01 94.2% 98.5%
3216998 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.65 56.0 4.90e-01 100.0% 68.2%
4983980 328.1.1.0 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like 0.65 51.0 5.16e-01 94.2% 88.6%
3266992 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.64 52.0 5.35e-01 91.3% 100.0%
3930245 101.1.2.407 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.64 55.0 4.75e-01 97.1% 65.5%
3710687 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.64 49.0 4.82e-01 91.3% 78.7%
5077205 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 4.50e-01 89.9% 77.9%
3715568 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 4.76e-01 95.7% 92.6%
4933974 328.9.1.0 ↗ a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.61 46.0 4.73e-01 89.9% 89.2%
3725516 10.12.1.12 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD 0.61 48.0 3.03e-01 85.5% 40.0%
3373950 101.1.2.288 ↗ alpha arrays › HTH › HTH › winged helix domain › Stk19 0.61 54.0 5.40e-01 100.0% 98.6%
5063572 328.3.1.0 ↗ a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.61 49.0 4.89e-01 94.2% 90.0%
5046509 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 52.0 5.12e-01 100.0% 94.7%
5026706 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 52.0 4.24e-01 95.7% 56.2%
5076758 328.9.1.0 ↗ a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain 0.61 48.0 4.72e-01 91.3% 82.7%
5067342 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.71e-01 95.7% 81.1%
3206206 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.60 50.0 4.95e-01 94.2% 100.0%
4025551 304.24.1.3 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.60 39.0 3.55e-01 84.1% 48.4%
3602750 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 49.0 3.41e-01 92.8% 46.3%
5078802 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 49.0 4.93e-01 95.7% 97.1%
4968723 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 4.21e-01 100.0% 55.8%
4943245 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.59 48.0 3.97e-01 95.7% 49.2%
3619277 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.59 41.0 3.80e-01 84.1% 56.7%
4997605 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 48.0 4.30e-01 94.2% 64.0%
3924693 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 40.0 3.65e-01 88.4% 52.6%
3477133 101.1.2.186 ↗ alpha arrays › HTH › HTH › winged helix domain › ASH2L-like_WH 0.58 47.0 4.12e-01 91.3% 71.8%
3685642 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.58 48.0 4.60e-01 95.7% 93.8%
4230863 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.58 49.0 4.31e-01 98.6% 71.8%
4986560 304.20.1.4 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C 0.57 42.0 3.13e-01 78.3% 73.9%
5013605 304.165.1.0 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 0.57 47.0 3.74e-01 92.8% 46.2%
3963468 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 51.0 4.44e-01 100.0% 83.8%
4940198 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 4.11e-01 100.0% 86.7%
3683127 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 40.0 4.38e-01 76.8% 100.0%
3475155 304.9.1.84 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 0.56 39.0 3.55e-01 87.0% 52.6%
3700850 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 4.13e-01 95.7% 98.1%
3963143 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 48.0 4.24e-01 98.6% 71.8%
3425793 304.9.1.47 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.56 40.0 3.63e-01 87.0% 55.8%
5023068 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.56 36.0 3.56e-01 87.0% 60.0%
3235989 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.56 40.0 2.89e-01 87.0% 23.9%
4993483 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.55 47.0 4.13e-01 97.1% 74.3%
4142128 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.55 40.0 3.62e-01 87.0% 55.0%
3517969 320.1.1.1 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.54 44.0 4.14e-01 100.0% 83.2%
3538236 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.54 40.0 3.54e-01 87.0% 51.8%
3313280 304.9.1.47 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.54 41.0 3.84e-01 89.9% 65.6%
4027544 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.54 47.0 3.86e-01 97.1% 85.6%
5078552 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.53 45.0 3.43e-01 98.6% 42.3%
3801947 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.53 40.0 3.53e-01 82.6% 55.2%
3768911 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 36.0 3.49e-01 81.2% 62.5%
3776325 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.53 39.0 3.14e-01 87.0% 37.8%
3718141 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.53 44.0 3.11e-01 98.6% 32.0%
3449322 304.9.1.47 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.52 38.0 3.63e-01 91.3% 65.9%
3419903 304.9.1.47 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.51 39.0 3.50e-01 91.3% 58.0%
3508377 304.9.1.79 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28976 0.51 42.0 3.62e-01 97.1% 55.8%
3452919 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.51 38.0 3.52e-01 82.6% 64.2%
3424438 304.9.1.47 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.51 38.0 3.46e-01 89.9% 58.0%
2697 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 44.0 4.30e-01 100.0% 88.3%