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KU310944.1__AMO43637.1__C171_00130__00013

Bact-Vir

KU310944.1__AMO43637.1__C171_00130__00013

Identity

Accession:
KU310944 ↗
Kingdom:
phage

Quality

62.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Kantovirus› Pseudomonas_phage_YMC11/06/C171_PPU_BP

TaxID: 1777063

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-42
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1um8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.90 79.0 4.68e-01 100.0% 14.8%
1dt9A01 3.30.960.10 Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 0.82 69.0 4.94e-01 100.0% 33.3%
4hkaA02 1.10.287.3810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 66.0 5.92e-01 100.0% 70.6%
1xjaB00 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.76 60.0 4.03e-01 100.0% 22.1%
4v19W00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.76 69.0 4.28e-01 100.0% 33.1%
1iurA01 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.76 60.0 5.14e-01 100.0% 61.9%
2yb5F01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.76 63.0 4.77e-01 100.0% 39.5%
2h1jA00 1.10.1370.30 Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › 0.75 60.0 3.27e-01 94.1% 5.7%
1rsoA01 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.72 55.0 5.13e-01 100.0% 72.5%
2f93B00 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.67 54.0 4.93e-01 100.0% 66.7%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.64 53.0 4.76e-01 100.0% 66.7%
5vjhB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 50.0 3.12e-01 97.1% 87.8%
2y1vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 55.0 3.41e-01 100.0% 53.0%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 47.0 3.82e-01 97.1% 52.2%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4999891 4163.1.1.1 ↗ alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.95 85.0 5.81e-01 100.0% 31.4%
3183420 604.6.1.4 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GGA_N-GAT 0.95 85.0 7.13e-01 100.0% 61.8%
4129922 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.90 80.0 5.61e-01 100.0% 34.0%
3946399 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.89 71.0 4.71e-01 91.2% 23.8%
3898996 109.4.1.219 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TINF2_N 0.80 68.0 4.19e-01 100.0% 17.0%
3597591 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.77 66.0 5.27e-01 100.0% 51.4%
3229763 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.75 60.0 3.66e-01 97.1% 14.6%
D2 medium residues 61-92
PDB