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KU530220.1__AMD42805.1__SEA_XKCD426_64__00064
Bact-VirKU530220.1__AMD42805.1__SEA_XKCD426_64__00064
Identity
- Accession:
- KU530220 ↗
- Kingdom:
- phage
Quality
52.1
mean pLDDT
Taxonomy
TaxID: 1784947
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-97
Domain cluster:
rep: MW291017.1__QPL14141.1__SEA_TURKISHDELIGHT_112__00112__D10-92
D2
high
residues 259-338
Domain cluster:
representative
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 57.0 | 6.20e-01 | 100.0% | 86.4% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 50.0 | 5.54e-01 | 85.0% | 76.9% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 51.0 | 5.45e-01 | 92.5% | 73.9% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 50.0 | 5.24e-01 | 88.7% | 69.9% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 53.0 | 5.94e-01 | 88.7% | 88.7% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 50.0 | 5.88e-01 | 91.3% | 94.6% |
| 2gfuA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 57.0 | 4.71e-01 | 87.5% | 46.3% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 53.0 | 6.00e-01 | 96.2% | 93.5% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 57.0 | 6.25e-01 | 96.2% | 96.9% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 52.0 | 5.96e-01 | 97.5% | 100.0% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 45.0 | 5.30e-01 | 86.3% | 92.5% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 56.0 | 5.01e-01 | 92.5% | 61.1% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 55.0 | 5.86e-01 | 95.0% | 94.3% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 42.0 | 5.15e-01 | 86.3% | 100.0% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.69 | 53.0 | 4.82e-01 | 97.5% | 60.6% |
| 4ii1A01 | 2.30.30.1190 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 57.0 | 5.78e-01 | 90.0% | 96.2% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 53.0 | 4.74e-01 | 91.3% | 61.1% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 54.0 | 5.66e-01 | 96.2% | 95.8% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.67 | 52.0 | 4.75e-01 | 97.5% | 64.4% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 58.0 | 4.83e-01 | 96.2% | 69.2% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 54.0 | 5.58e-01 | 93.8% | 94.6% |
| 2budA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 51.0 | 4.88e-01 | 100.0% | 75.0% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 52.0 | 4.80e-01 | 100.0% | 69.5% |
| 3ceyB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 51.0 | 4.22e-01 | 100.0% | 49.6% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 44.0 | 4.70e-01 | 100.0% | 89.4% |
| 1bnkA00 | 3.10.300.10 | Alpha Beta › Roll › 3-methyladenine DNA Glycosylase; Chain A › Methylpurine-DNA glycosylase (MPG) | 0.62 | 53.0 | 4.05e-01 | 97.5% | 72.5% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 4.86e-01 | 98.8% | 97.0% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 43.0 | 3.73e-01 | 73.8% | 54.8% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 5.20e-01 | 87.5% | 100.0% |
| 7jiuA03 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.61 | 50.0 | 4.32e-01 | 95.0% | 55.9% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 47.0 | 4.97e-01 | 97.5% | 95.8% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 39.0 | 3.39e-01 | 96.2% | 42.5% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 49.0 | 4.56e-01 | 100.0% | 75.0% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.57 | 47.0 | 4.57e-01 | 96.2% | 80.6% |
| 3eyrA00 | 3.15.10.40 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 | 0.56 | 49.0 | 3.90e-01 | 100.0% | 72.2% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.55 | 39.0 | 3.99e-01 | 96.2% | 75.6% |
| 2fr5A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.55 | 39.0 | 3.37e-01 | 92.5% | 44.9% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.55 | 42.0 | 4.06e-01 | 97.5% | 71.0% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 32.0 | 3.69e-01 | 78.8% | 80.7% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 42.0 | 3.89e-01 | 83.7% | 86.0% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 45.0 | 3.77e-01 | 93.8% | 95.8% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 46.0 | 3.86e-01 | 96.2% | 87.9% |
| 1jb7A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 39.0 | 3.21e-01 | 81.2% | 94.7% |
| 1g19A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 37.0 | 2.73e-01 | 73.8% | 93.8% |
| 2m1hA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 42.0 | 3.88e-01 | 97.5% | 67.3% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 45.0 | 3.70e-01 | 96.2% | 96.6% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 42.0 | 3.54e-01 | 93.8% | 86.6% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 40.0 | 3.83e-01 | 87.5% | 83.8% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.51 | 43.0 | 3.67e-01 | 97.5% | 97.9% |
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 43.0 | 3.44e-01 | 95.0% | 81.5% |
| 3h3iA00 | 2.40.128.220 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 39.0 | 3.41e-01 | 88.7% | 93.5% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043533 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 58.0 | 6.49e-01 | 88.7% | 95.3% |
| 2727964 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.80 | 55.0 | 6.29e-01 | 95.0% | 98.3% |
| 3533770 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.79 | 54.0 | 4.92e-01 | 97.5% | 54.3% |
| 3852545 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 51.0 | 5.78e-01 | 91.3% | 88.3% |
| 3395150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 52.0 | 5.96e-01 | 91.3% | 95.0% |
| 3886492 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.72 | 54.0 | 5.58e-01 | 88.7% | 84.0% |
| 4235293 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 65.0 | 5.75e-01 | 100.0% | 85.2% |
| 3828371 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.71 | 57.0 | 5.61e-01 | 95.0% | 80.0% |
| 3423334 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.71 | 54.0 | 4.54e-01 | 88.7% | 49.2% |
| 3485761 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 60.0 | 4.59e-01 | 92.5% | 50.0% |
| 3226615 | 4.1.1.389 ↗ | beta barrels › SH3 › SH3 › SH3 › PF30352 | 0.70 | 51.0 | 4.84e-01 | 92.5% | 64.2% |
| 3607981 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 53.0 | 5.52e-01 | 92.5% | 86.5% |
| 3213215 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 53.0 | 4.65e-01 | 91.3% | 55.7% |
| 3530591 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.70 | 54.0 | 4.63e-01 | 92.5% | 52.8% |
| 3573739 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.69 | 55.0 | 4.88e-01 | 86.3% | 73.9% |
| 3622641 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.69 | 57.0 | 4.92e-01 | 88.7% | 73.3% |
| 3826141 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 5.58e-01 | 92.5% | 81.1% |
| 3473981 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.68 | 59.0 | 5.03e-01 | 93.8% | 72.8% |
| 3483566 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 54.0 | 4.91e-01 | 85.0% | 71.4% |
| 3703449 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 56.0 | 5.76e-01 | 88.7% | 94.7% |
| 4020096 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 59.0 | 4.92e-01 | 97.5% | 59.3% |
| 3940546 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.67 | 54.0 | 4.78e-01 | 86.3% | 73.9% |
| 3782292 | 4.1.1.170 ↗ | beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind | 0.67 | 53.0 | 5.36e-01 | 86.3% | 85.0% |
| 3720815 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.66 | 58.0 | 5.17e-01 | 97.5% | 76.5% |
| 3472685 | 3324.1.1.2 ↗ | extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases | 0.66 | 58.0 | 4.00e-01 | 96.2% | 40.0% |
| 3691620 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.66 | 59.0 | 5.20e-01 | 97.5% | 75.7% |
| 3612351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 56.0 | 5.80e-01 | 93.8% | 98.7% |
| 3661025 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.65 | 51.0 | 4.51e-01 | 88.7% | 58.3% |
| 3691144 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.65 | 51.0 | 5.40e-01 | 91.3% | 95.7% |
| 3806777 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 53.0 | 5.47e-01 | 96.2% | 93.3% |
| 3322460 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.64 | 55.0 | 4.81e-01 | 92.5% | 63.5% |
| 3923767 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.64 | 55.0 | 5.27e-01 | 91.3% | 86.7% |
| 3358748 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.64 | 54.0 | 5.47e-01 | 92.5% | 91.3% |
| 3931161 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 55.0 | 4.83e-01 | 93.8% | 73.0% |
| 3484822 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.63 | 47.0 | 4.74e-01 | 96.2% | 78.8% |
| 3406338 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.63 | 57.0 | 4.95e-01 | 96.2% | 71.3% |
| 3280641 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.63 | 48.0 | 4.48e-01 | 93.8% | 65.0% |
| 3184389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 53.0 | 4.09e-01 | 91.3% | 51.4% |
| 3647393 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.63 | 51.0 | 4.40e-01 | 88.7% | 56.0% |
| 3723834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 49.0 | 5.16e-01 | 91.3% | 97.1% |
| 3998386 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.63 | 58.0 | 5.05e-01 | 100.0% | 70.4% |
| 3740204 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.62 | 50.0 | 4.99e-01 | 100.0% | 84.7% |
| 4152374 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 51.0 | 5.09e-01 | 96.2% | 88.1% |
| 4229837 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.61 | 54.0 | 4.11e-01 | 97.5% | 60.0% |
| 3721700 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 4.10e-01 | 93.8% | 68.8% |
| 4017740 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 46.0 | 4.06e-01 | 83.7% | 92.5% |
| 4425420 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 50.0 | 4.96e-01 | 96.2% | 88.2% |
| 4959435 | 4160.1.1.3 ↗ | beta complex topology › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › PF26233 | 0.59 | 51.0 | 3.94e-01 | 100.0% | 92.7% |
| 3203392 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 47.0 | 3.32e-01 | 87.5% | 40.8% |
| 4172288 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.57 | 40.0 | 3.92e-01 | 97.5% | 66.7% |
| 3370724 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 47.0 | 4.20e-01 | 92.5% | 75.7% |
| 4422325 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 47.0 | 4.60e-01 | 96.2% | 88.8% |
| 3243970 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 44.0 | 4.10e-01 | 100.0% | 69.0% |
| 3698096 | 219.1.1.115 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C | 0.54 | 45.0 | 3.53e-01 | 93.8% | 46.1% |
| 3193247 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.54 | 45.0 | 3.30e-01 | 96.2% | 67.1% |
| 3996278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 49.0 | 4.26e-01 | 100.0% | 67.5% |
| 22055 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 41.0 | 3.15e-01 | 83.7% | 44.0% |
| 3411284 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.52 | 40.0 | 3.70e-01 | 86.3% | 83.6% |
| 4021685 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 44.0 | 3.08e-01 | 97.5% | 54.0% |
| 3264469 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.51 | 43.0 | 4.23e-01 | 95.0% | 89.4% |
| 4050042 | 4.1.1.441 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26332 | 0.51 | 39.0 | 3.95e-01 | 91.3% | 85.0% |
D3
medium
residues 177-249