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KU574722.1__AMM43655.1__CBB_90__00090

Bact-Vir

KU574722.1__AMM43655.1__CBB_90__00090

Identity

Accession:
KU574722 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-89
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.67 43.0 3.88e-01 80.3% 48.0%
1okjA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.67 43.0 4.01e-01 73.7% 52.6%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.65 41.0 4.26e-01 76.3% 67.6%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.64 55.0 5.45e-01 100.0% 93.7%
3nuhB03 3.10.20.690 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 46.0 4.43e-01 92.1% 66.3%
3f2kB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.62 37.0 2.83e-01 75.0% 24.0%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.62 54.0 5.00e-01 100.0% 88.9%
2hqsA01 3.40.50.10070 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain 0.62 54.0 4.46e-01 100.0% 72.5%
3vhxF00 2.60.40.4330 Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain 0.61 48.0 4.33e-01 84.2% 71.6%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.60 42.0 4.00e-01 84.2% 60.9%
5z1gB01 3.40.50.10480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain 0.59 47.0 3.49e-01 88.2% 33.3%
2g8sB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 49.0 3.25e-01 96.1% 30.5%
3jvvA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.58 33.0 3.04e-01 85.5% 39.0%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 47.0 3.16e-01 92.1% 59.7%
1g5hA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.57 49.0 3.37e-01 100.0% 33.9%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 48.0 3.82e-01 98.7% 63.9%
1zuoB00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.56 49.0 4.07e-01 100.0% 87.1%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 46.0 2.95e-01 94.7% 23.6%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.55 33.0 2.57e-01 76.3% 25.1%
3qszA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 3.61e-01 97.4% 77.4%
1aj6A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 42.0 3.15e-01 84.2% 63.9%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.54 44.0 3.64e-01 89.5% 60.6%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 35.0 2.81e-01 76.3% 30.3%
1qhlA00 3.40.1140.10 Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › 0.53 45.0 3.40e-01 98.7% 58.6%
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 45.0 2.95e-01 97.4% 61.0%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 38.0 3.56e-01 76.3% 79.2%
1zj8A04 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.53 46.0 3.77e-01 100.0% 71.6%
1q7lA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 39.0 2.93e-01 78.9% 59.9%
3lyxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 37.0 3.29e-01 76.3% 53.3%
6upsA01 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.52 43.0 3.53e-01 94.7% 83.2%
3mr0A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 37.0 3.39e-01 76.3% 56.4%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 38.0 3.36e-01 76.3% 82.7%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 45.0 3.36e-01 100.0% 65.4%
2hdwA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 45.0 3.27e-01 100.0% 71.3%
3rbsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.59e-01 76.3% 92.0%
4ztkA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 44.0 3.08e-01 97.4% 95.1%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 3.50e-01 100.0% 69.7%
4hiaA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 45.0 3.46e-01 98.7% 89.2%
3qh4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 43.0 2.98e-01 100.0% 86.0%
2gj3A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 38.0 3.36e-01 82.9% 52.9%
1bywA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 38.0 3.45e-01 84.2% 59.1%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.50 45.0 3.81e-01 98.7% 63.4%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.50 43.0 3.80e-01 100.0% 95.8%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3211250 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 50.0 3.50e-01 75.0% 40.2%
3607858 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 57.0 5.19e-01 97.4% 74.3%
3704402 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.66 56.0 4.98e-01 97.4% 71.3%
4973090 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.66 57.0 5.28e-01 100.0% 86.0%
3444177 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.66 54.0 5.30e-01 88.2% 86.3%
3684661 4099.1.1.1 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD 0.63 46.0 3.79e-01 81.6% 42.1%
3648057 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 53.0 3.42e-01 93.4% 39.6%
3606640 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 51.0 4.57e-01 92.1% 88.2%
3599909 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 53.0 4.78e-01 98.7% 77.3%
3710326 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 54.0 5.24e-01 98.7% 88.2%
3886322 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 51.0 3.25e-01 90.8% 21.8%
3695635 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 50.0 4.75e-01 88.2% 100.0%
3957119 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 43.0 3.14e-01 72.4% 29.1%
3989853 77.1.1.13 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › CFSR 0.61 55.0 3.60e-01 98.7% 32.7%
3914857 3435.1.1.2 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N 0.61 52.0 4.47e-01 96.1% 72.0%
5083024 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 53.0 3.36e-01 100.0% 66.5%
5074611 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.61 44.0 4.36e-01 76.3% 92.5%
4819450 110.1.1.5 alpha arrays › DEATH domain › DEATH domain › DEATH domain › CENP-N 0.60 51.0 4.26e-01 96.1% 65.5%
5078629 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 43.0 3.85e-01 76.3% 56.0%
3803844 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 46.0 2.94e-01 84.2% 22.1%
4026643 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 50.0 4.83e-01 96.1% 81.2%
3864913 218.1.1.2 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.60 42.0 3.35e-01 73.7% 74.8%
4937095 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.60 47.0 4.07e-01 84.2% 90.4%
5014183 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.59 47.0 4.48e-01 85.5% 100.0%
3599937 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 50.0 4.66e-01 97.4% 86.0%
4352332 3283.1.1.1 a+b two layers › Nitrogen fixation protein › Nitrogen fixation protein › Nitrogen fixation protein › DUF269 0.59 50.0 4.16e-01 100.0% 52.9%
3188398 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.59 52.0 3.81e-01 100.0% 94.3%
3473974 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.59 42.0 3.41e-01 75.0% 75.2%
3608162 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.59 52.0 4.06e-01 100.0% 89.7%
3209694 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 46.0 4.26e-01 97.4% 67.0%
3475222 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 48.0 2.97e-01 93.4% 96.6%
4804719 219.1.1.68 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › RickCE_cat 0.58 41.0 3.37e-01 75.0% 61.3%
4160858 241.1.1.2 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C 0.58 51.0 4.10e-01 98.7% 89.9%
3213270 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 41.0 3.42e-01 76.3% 80.7%
5072132 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 45.0 4.44e-01 98.7% 82.5%
3286732 243.1.1.72 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3071 0.57 49.0 4.53e-01 97.4% 88.0%
3258280 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.57 49.0 3.46e-01 100.0% 52.5%
3519916 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.57 39.0 3.68e-01 72.4% 94.7%
4977960 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 44.0 2.59e-01 86.8% 60.6%
3222003 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.56 45.0 2.90e-01 89.5% 43.7%
3927438 7579.1.1.42 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 0.55 43.0 2.99e-01 89.5% 85.6%
3700285 330.1.1.22 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 0.55 43.0 3.64e-01 86.8% 51.1%
4299844 223.1.1.135 a+b three layers › Profilin-like › sensor domains › sensor domains › Sensor_TM1, Stimulus_sens_1 0.55 44.0 3.41e-01 86.8% 75.9%
4014419 206.1.1.10 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.55 43.0 2.81e-01 89.5% 26.1%
3408147 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.54 48.0 3.32e-01 97.4% 29.6%
3700284 330.1.1.22 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 0.54 43.0 3.32e-01 86.8% 39.4%
4881570 206.1.3.24 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_lig_T4_1 0.54 40.0 2.80e-01 78.9% 23.7%
3991847 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 45.0 3.39e-01 94.7% 84.0%
3715021 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 44.0 3.29e-01 90.8% 37.1%
3634800 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 39.0 3.51e-01 76.3% 56.2%
3267754 719.1.1.2 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.53 39.0 3.35e-01 78.9% 81.6%
4108772 243.3.1.10 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 0.53 39.0 3.99e-01 96.1% 84.0%
5020279 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.53 45.0 3.74e-01 96.1% 67.9%
3763073 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.53 42.0 2.60e-01 89.5% 52.3%
4009780 7579.1.1.42 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 0.53 37.0 2.44e-01 73.7% 62.1%
3203073 867.1.1.1 a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas 0.53 46.0 2.97e-01 98.7% 80.0%
3588535 1098.1.1.1 a+b three layers › Mid-cell-anchored protein Z (MapZ) extracellular domain 2 › Mid-cell-anchored protein Z (MapZ) extracellular domain 2 › Mid-cell-anchored protein Z (MapZ) extracellular domain 2 › MapZ_C2 0.52 44.0 3.97e-01 98.7% 68.4%
142328 7579.1.1.36 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.51 43.0 2.99e-01 100.0% 86.8%
3497311 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.50 43.0 2.86e-01 98.7% 88.2%