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KU574722.1__AMM43885.1__CBB_322__00322
Bact-VirKU574722.1__AMM43885.1__CBB_322__00322
Identity
- Accession:
- KU574722 ↗
- Kingdom:
- phage
Quality
71.5
mean pLDDT
Taxonomy
TaxID: 2772511
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 379-478
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g79A00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.67 | 46.0 | 4.14e-01 | 70.0% | 97.0% |
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.63 | 43.0 | 4.49e-01 | 71.0% | 87.2% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.62 | 52.0 | 4.91e-01 | 91.0% | 92.6% |
| 2fkiA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.61 | 48.0 | 4.60e-01 | 85.0% | 87.3% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 52.0 | 4.44e-01 | 95.0% | 88.9% |
| 2nvwA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 41.0 | 3.24e-01 | 70.0% | 59.2% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 44.0 | 3.93e-01 | 79.0% | 93.2% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.59 | 43.0 | 4.50e-01 | 98.0% | 83.0% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.58 | 48.0 | 3.98e-01 | 91.0% | 50.3% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.58 | 48.0 | 4.26e-01 | 92.0% | 93.2% |
| 6bm0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 42.0 | 2.88e-01 | 78.0% | 42.4% |
| 8adbA01 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 42.0 | 3.34e-01 | 78.0% | 44.0% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 45.0 | 3.14e-01 | 86.0% | 91.0% |
| 7fjlA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.55 | 50.0 | 3.74e-01 | 99.0% | 49.8% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 33.0 | 3.97e-01 | 77.0% | 93.8% |
| 3i8tA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 41.0 | 3.70e-01 | 82.0% | 66.4% |
| 2g18I00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.53 | 44.0 | 3.46e-01 | 94.0% | 84.0% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.53 | 46.0 | 3.34e-01 | 99.0% | 77.7% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.52 | 41.0 | 4.23e-01 | 86.0% | 89.7% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 44.0 | 3.97e-01 | 97.0% | 77.3% |
| 5xyig01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 3.11e-01 | 94.0% | 69.0% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 38.0 | 3.16e-01 | 81.0% | 43.7% |
| 3d2uE01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.50 | 35.0 | 2.97e-01 | 74.0% | 95.2% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281348 | 4221.1.1.0 ↗ | a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like | 0.69 | 53.0 | 5.33e-01 | 81.0% | 98.0% |
| 3290321 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 47.0 | 4.70e-01 | 72.0% | 94.0% |
| 3595152 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 46.0 | 3.78e-01 | 70.0% | 97.7% |
| 3432311 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.66 | 55.0 | 4.73e-01 | 91.0% | 86.3% |
| 3813621 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.65 | 47.0 | 4.89e-01 | 77.0% | 100.0% |
| 3890276 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.63 | 46.0 | 5.08e-01 | 77.0% | 98.8% |
| 3934097 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.61 | 52.0 | 4.67e-01 | 93.0% | 96.4% |
| 3721965 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.61 | 44.0 | 4.19e-01 | 74.0% | 81.7% |
| 3266702 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 37.0 | 3.86e-01 | 70.0% | 65.6% |
| 3981710 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.60 | 41.0 | 3.03e-01 | 71.0% | 41.6% |
| 3242101 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.58 | 47.0 | 2.93e-01 | 90.0% | 92.2% |
| 4003669 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.57 | 46.0 | 2.99e-01 | 89.0% | 64.4% |
| 3867302 | 5.1.4.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 | 0.56 | 44.0 | 3.00e-01 | 85.0% | 91.5% |
| 3551142 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.56 | 39.0 | 3.49e-01 | 73.0% | 67.6% |
| 4956740 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.55 | 38.0 | 3.55e-01 | 70.0% | 74.4% |
| 3259661 | 331.23.1.9 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › RnlA_toxin | 0.55 | 37.0 | 4.29e-01 | 74.0% | 98.6% |
| 2796039 | 331.3.1.21 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › LigXa_C | 0.55 | 50.0 | 3.63e-01 | 99.0% | 44.6% |
| 3661138 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.55 | 43.0 | 3.94e-01 | 86.0% | 95.7% |
| 3197023 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.55 | 43.0 | 2.91e-01 | 85.0% | 73.0% |
| 3743929 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 41.0 | 2.88e-01 | 81.0% | 93.7% |
| 3785654 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.54 | 44.0 | 2.81e-01 | 91.0% | 44.1% |
| 3499443 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 43.0 | 2.85e-01 | 88.0% | 47.0% |
| 3941423 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.53 | 38.0 | 4.09e-01 | 77.0% | 100.0% |
| 4622176 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 45.0 | 3.08e-01 | 98.0% | 63.4% |
| 1310956 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 43.0 | 3.01e-01 | 90.0% | 84.8% |
| 3220069 | 5.1.4.147 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N | 0.53 | 41.0 | 2.86e-01 | 85.0% | 61.1% |
| 3487767 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 46.0 | 3.22e-01 | 98.0% | 91.3% |
| 6687 | 5105.1.1.0 ↗ | 0.52 | 41.0 | 4.22e-01 | 86.0% | 88.8% | |
| 3395174 | 5.1.4.158 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 | 0.52 | 41.0 | 2.88e-01 | 88.0% | 79.4% |
| 4964362 | 6030.1.1.1 ↗ | a+b two layers › Middle domain of ribosomal protein S2-related protein › Middle domain of ribosomal protein S2-related protein › Middle domain of ribosomal protein S2-related protein › DR2241 | 0.51 | 41.0 | 3.90e-01 | 89.0% | 95.8% |
| 3782385 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.50 | 43.0 | 2.87e-01 | 98.0% | 64.7% |
| 3338677 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.50 | 40.0 | 2.94e-01 | 91.0% | 63.4% |
| 3402824 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.50 | 44.0 | 2.97e-01 | 100.0% | 65.4% |
D2
high
residues 486-606
Domain cluster:
rep: JN882285.1__AFC21766.1__GAP32_316__00319__D430-534
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.61 | 46.0 | 4.25e-01 | 79.3% | 89.7% |
| 3mc6A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 41.0 | 4.05e-01 | 71.1% | 64.9% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.58 | 39.0 | 3.46e-01 | 85.1% | 46.9% |
| 1vp4B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 42.0 | 3.68e-01 | 76.0% | 56.1% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 43.0 | 3.99e-01 | 78.5% | 96.7% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 46.0 | 3.39e-01 | 92.6% | 92.5% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 45.0 | 3.25e-01 | 89.3% | 70.0% |
| 3ljsA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 44.0 | 3.37e-01 | 91.7% | 88.2% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 45.0 | 3.30e-01 | 94.2% | 77.2% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.53 | 39.0 | 4.05e-01 | 86.8% | 82.1% |
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.53 | 39.0 | 4.16e-01 | 86.8% | 89.4% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.53 | 41.0 | 2.98e-01 | 82.6% | 79.8% |
| 1in0A02 | 3.30.70.990 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YajQ-like, domain 2 | 0.53 | 34.0 | 3.83e-01 | 78.5% | 84.8% |
| 4bemJ00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.52 | 43.0 | 3.74e-01 | 88.4% | 67.4% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.52 | 34.0 | 3.85e-01 | 89.3% | 94.0% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 43.0 | 3.34e-01 | 90.9% | 95.4% |
| 7ne4A01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.52 | 41.0 | 3.01e-01 | 85.1% | 69.0% |
| 4xvcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 38.0 | 2.91e-01 | 77.7% | 73.4% |
| 3witA00 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.51 | 26.0 | 3.40e-01 | 76.9% | 92.2% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.50 | 36.0 | 3.17e-01 | 86.8% | 49.5% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975637 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.73 | 48.0 | 5.74e-01 | 78.5% | 100.0% |
| 3821615 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.63 | 45.0 | 3.97e-01 | 75.2% | 96.2% |
| 5061240 | 241.1.1.30 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 | 0.62 | 48.0 | 4.60e-01 | 81.8% | 94.3% |
| 5059660 | 241.1.1.30 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 | 0.60 | 48.0 | 4.61e-01 | 84.3% | 95.0% |
| 5013346 | 241.1.1.30 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 | 0.60 | 47.0 | 4.53e-01 | 83.5% | 92.9% |
| 3582395 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 46.0 | 4.48e-01 | 81.8% | 81.5% |
| 4940665 | 9.16.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 | 0.59 | 37.0 | 4.22e-01 | 92.6% | 90.2% |
| 5040837 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.59 | 34.0 | 4.16e-01 | 83.5% | 92.0% |
| 3599903 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 49.0 | 3.44e-01 | 95.9% | 83.0% |
| 5033243 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.56 | 34.0 | 4.04e-01 | 86.8% | 91.3% |
| 3215376 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.56 | 48.0 | 3.37e-01 | 95.9% | 80.5% |
| 3567966 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.55 | 38.0 | 4.13e-01 | 90.1% | 88.4% |
| 1906032 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.55 | 45.0 | 4.08e-01 | 89.3% | 65.1% |
| 3998243 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 45.0 | 3.33e-01 | 92.6% | 82.1% |
| 3997968 | 5.1.5.128 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NUP159_NUP214 | 0.54 | 45.0 | 3.49e-01 | 92.6% | 97.5% |
| 5011042 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.53 | 39.0 | 3.83e-01 | 88.4% | 70.8% |
| 3781929 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.53 | 45.0 | 3.15e-01 | 95.9% | 88.6% |
| 3596616 | 3794.1.1.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit | 0.52 | 39.0 | 3.83e-01 | 79.3% | 91.1% |
| None | — | 0.52 | 45.0 | 3.12e-01 | 95.9% | 44.0% | |
| 4806694 | 1033.1.1.3 ↗ | beta duplicates or obligate multimers › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › Toxin A (TcdA) delivery domain › TcdA_TcdB_pore, PF30720 | 0.52 | 39.0 | 3.24e-01 | 79.3% | 65.3% |
| 2756455 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.52 | 33.0 | 3.74e-01 | 89.3% | 87.6% |
| 3275492 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.50 | 44.0 | 3.09e-01 | 98.3% | 86.9% |
D3
medium
residues 60-71_215-354_622-641
D4
medium
residues 72-214_355-378
Domain cluster:
rep: JN882285.1__AFC21766.1__GAP32_316__00319__D9-189
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.68 | 25.0 | 3.85e-01 | 83.8% | 77.9% |
| 1lkoA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 35.0 | 3.75e-01 | 85.6% | 58.6% |
| 3r2kA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 33.0 | 3.43e-01 | 85.6% | 53.9% |
| 1yuzB01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 33.0 | 3.65e-01 | 85.6% | 61.6% |
| 1jgcA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 33.0 | 3.40e-01 | 85.6% | 53.8% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 36.0 | 3.86e-01 | 85.6% | 66.0% |
| 1ailA00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.60 | 28.0 | 3.99e-01 | 98.2% | 100.0% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.60 | 24.0 | 3.60e-01 | 91.0% | 88.1% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 28.0 | 4.11e-01 | 96.4% | 97.4% |
| 3e6sA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 32.0 | 3.31e-01 | 85.6% | 57.2% |
| 1nzeA00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.58 | 27.0 | 3.38e-01 | 85.6% | 69.6% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.57 | 30.0 | 3.88e-01 | 89.2% | 84.5% |
| 3pivA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 33.0 | 3.42e-01 | 85.6% | 61.5% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 29.0 | 3.79e-01 | 89.2% | 85.3% |
| 2clbA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 33.0 | 3.45e-01 | 85.6% | 62.3% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 29.0 | 3.73e-01 | 89.2% | 85.3% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 28.0 | 3.55e-01 | 88.0% | 84.8% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5033222 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.88 | 31.0 | 3.99e-01 | 89.2% | 54.3% |
| 4968405 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.86 | 29.0 | 3.64e-01 | 87.4% | 49.1% |
| 5038830 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.85 | 30.0 | 4.00e-01 | 89.2% | 57.0% |
| 4172303 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.81 | 31.0 | 3.58e-01 | 88.6% | 48.8% |
| 4202852 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.80 | 30.0 | 3.88e-01 | 88.6% | 58.1% |
| 3719058 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.70 | 30.0 | 4.23e-01 | 88.6% | 80.0% |
| 4985440 | 604.10.1.0 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac | 0.70 | 29.0 | 4.49e-01 | 86.2% | 90.7% |
| 3958 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.62 | 36.0 | 3.79e-01 | 85.6% | 63.8% |
| 3516214 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 29.0 | 4.09e-01 | 89.2% | 88.9% |
| 4397328 | 604.10.1.1 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA | 0.57 | 30.0 | 3.72e-01 | 89.2% | 79.1% |
| 4056054 | 604.10.1.1 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA | 0.57 | 30.0 | 3.72e-01 | 89.2% | 79.1% |
| 3988387 | 604.10.1.1 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA | 0.57 | 30.0 | 3.89e-01 | 89.2% | 87.0% |
| 3992590 | 603.1.1.110 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF26585 | 0.56 | 30.0 | 3.94e-01 | 89.2% | 90.0% |
| 3623892 | 150.1.1.109 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › LUC7 | 0.54 | 33.0 | 3.47e-01 | 100.0% | 66.5% |
| 3387443 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.53 | 31.0 | 3.69e-01 | 89.8% | 82.6% |
| 4053498 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.53 | 33.0 | 4.07e-01 | 95.8% | 95.5% |
| 5036028 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.53 | 35.0 | 3.79e-01 | 85.6% | 76.6% |
| 4453744 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 31.0 | 3.76e-01 | 92.8% | 87.3% |
| 5041256 | 601.4.1.91 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › PF30769 | 0.53 | 33.0 | 4.17e-01 | 92.2% | 100.0% |
| 5079123 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.52 | 37.0 | 3.40e-01 | 94.6% | 56.7% |
| 4990841 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.51 | 38.0 | 2.70e-01 | 75.4% | 86.4% |
| 3221738 | 192.29.1.172 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF29678 | 0.51 | 36.0 | 3.96e-01 | 94.6% | 86.4% |
| 3195414 | 604.16.1.0 ↗ | alpha bundles › Spectrin repeat-like › Hypothetical membrane protein Ta0354, soluble domain › Hypothetical membrane protein Ta0354, soluble domain | 0.50 | 31.0 | 3.87e-01 | 91.0% | 100.0% |
D5
medium
residues 687-845