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KU594605.1__AMO42935.1__R290704_153__00147
Bact-VirKU594605.1__AMO42935.1__R290704_153__00147
Identity
- Accession:
- KU594605 ↗
- Kingdom:
- phage
Quality
79.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Neptunevirus›
Cyanophage_S-RIM50
TaxID: 687803
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 94-135
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kxqA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.72 | 47.0 | 5.31e-01 | 100.0% | 96.7% |
| 1u2kA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.69 | 52.0 | 3.70e-01 | 100.0% | 27.3% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 51.0 | 4.07e-01 | 100.0% | 39.8% |
| 3lrrA00 | 2.170.150.30 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › RIG-I-like receptor, C-terminal regulatory domain | 0.67 | 50.0 | 3.77e-01 | 88.1% | 57.0% |
| 2ysiA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.62 | 41.0 | 4.28e-01 | 97.6% | 84.8% |
| 1qypA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.61 | 48.0 | 4.52e-01 | 100.0% | 77.2% |
| 1vq8300 | 3.10.450.80 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 48.0 | 3.98e-01 | 100.0% | 85.9% |
| 2bzgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 45.0 | 2.94e-01 | 92.9% | 17.5% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 39.0 | 3.52e-01 | 95.2% | 46.9% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.57 | 45.0 | 3.81e-01 | 100.0% | 74.7% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.56 | 42.0 | 3.15e-01 | 100.0% | 31.4% |
| 1g29103 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 44.0 | 3.94e-01 | 95.2% | 90.8% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 43.0 | 3.65e-01 | 100.0% | 61.2% |
| 1vw5A00 | 3.30.70.1420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Structure from the mobile metagenome of cole harbour salt marsh: integron cassette protein hfx_cass1 | 0.54 | 40.0 | 3.03e-01 | 100.0% | 94.7% |
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 41.0 | 2.57e-01 | 97.6% | 35.2% |
| 2wacA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 45.0 | 3.25e-01 | 97.6% | 60.3% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 3.31e-01 | 100.0% | 40.6% |
| 5yy8A00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.52 | 34.0 | 2.21e-01 | 100.0% | 11.0% |
| 2dk1A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 35.0 | 3.41e-01 | 71.4% | 58.0% |
| 1bagA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 34.0 | 2.95e-01 | 71.4% | 35.9% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 36.0 | 3.27e-01 | 88.1% | 50.0% |
| 2zyzB02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 38.0 | 3.09e-01 | 100.0% | 38.9% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.51 | 39.0 | 3.76e-01 | 100.0% | 71.2% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 39.0 | 3.12e-01 | 95.2% | 57.3% |
| 3a46A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.51 | 42.0 | 3.08e-01 | 100.0% | 41.2% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 38.0 | 2.64e-01 | 100.0% | 21.2% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 36.0 | 3.35e-01 | 88.1% | 55.2% |
| 1krlA00 | 6.20.50.130 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.51 | 34.0 | 3.39e-01 | 71.4% | 79.5% |
| 2rf4E02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 40.0 | 3.34e-01 | 95.2% | 56.6% |
| 5cemA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 40.0 | 3.47e-01 | 97.6% | 83.6% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5023784 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 60.0 | 5.48e-01 | 92.9% | 66.7% |
| 4944150 | 377.2.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › C-terminal, Zn-finger domain of MutM-like DNA repair proteins | 0.75 | 56.0 | 5.82e-01 | 85.7% | 100.0% |
| 4984918 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.74 | 53.0 | 5.54e-01 | 92.9% | 100.0% |
| 5028776 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 60.0 | 5.73e-01 | 97.6% | 82.0% |
| 4960279 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.71 | 54.0 | 5.19e-01 | 85.7% | 72.0% |
| None | — | 0.69 | 53.0 | 3.24e-01 | 100.0% | 12.1% | |
| 4929592 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 57.0 | 5.89e-01 | 100.0% | 100.0% |
| 5039125 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.68 | 57.0 | 5.07e-01 | 100.0% | 64.6% |
| 4026161 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.68 | 55.0 | 4.08e-01 | 97.6% | 77.6% |
| 3781077 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.68 | 54.0 | 4.19e-01 | 95.2% | 47.6% |
| 4964575 | 375.1.1.346 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7838 | 0.68 | 56.0 | 5.75e-01 | 97.6% | 100.0% |
| 5033134 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 57.0 | 5.61e-01 | 97.6% | 100.0% |
| 3258369 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 50.0 | 5.08e-01 | 100.0% | 97.4% |
| 3501282 | 3246.1.1.0 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins | 0.66 | 54.0 | 4.74e-01 | 100.0% | 64.3% |
| 3811668 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 47.0 | 4.75e-01 | 81.0% | 90.0% |
| 3187588 | 66.1.1.1 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske | 0.65 | 52.0 | 3.84e-01 | 100.0% | 67.4% |
| 4941366 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 53.0 | 5.46e-01 | 97.6% | 97.5% |
| 4994320 | 2004.1.1.100 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NTPase_1 | 0.64 | 44.0 | 2.90e-01 | 71.4% | 16.9% |
| 3490290 | 3246.1.1.0 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins | 0.63 | 52.0 | 4.21e-01 | 100.0% | 52.2% |
| 3702281 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.63 | 46.0 | 4.40e-01 | 88.1% | 89.1% |
| 3413714 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.63 | 52.0 | 3.33e-01 | 97.6% | 48.6% |
| 3606500 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.62 | 48.0 | 4.45e-01 | 95.2% | 85.0% |
| 5081496 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 47.0 | 4.81e-01 | 95.2% | 90.0% |
| 2426645 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.62 | 47.0 | 4.53e-01 | 92.9% | 78.2% |
| 4929724 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 50.0 | 4.93e-01 | 95.2% | 86.7% |
| 3816604 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.62 | 53.0 | 4.62e-01 | 97.6% | 64.6% |
| 3762791 | 913.1.1.9 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › PF27521 | 0.62 | 42.0 | 4.19e-01 | 73.8% | 73.3% |
| 5032252 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 50.0 | 4.86e-01 | 100.0% | 84.0% |
| 3358110 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 47.0 | 4.69e-01 | 100.0% | 93.3% |
| 3583925 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.60 | 47.0 | 3.66e-01 | 88.1% | 49.5% |
| 5002755 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.60 | 48.0 | 4.78e-01 | 100.0% | 86.7% |
| 5050109 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.60 | 49.0 | 4.04e-01 | 100.0% | 58.8% |
| 5067597 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.60 | 42.0 | 3.26e-01 | 100.0% | 30.9% |
| 4609469 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 43.0 | 3.28e-01 | 100.0% | 31.8% |
| 3500164 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.58 | 39.0 | 4.21e-01 | 92.9% | 96.7% |
| 4460368 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 46.0 | 4.56e-01 | 97.6% | 84.4% |
| 3938955 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 45.0 | 4.47e-01 | 97.6% | 95.6% |
| 4971490 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.56 | 39.0 | 3.09e-01 | 100.0% | 30.9% |
| 5032251 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 39.0 | 3.88e-01 | 95.2% | 77.8% |
| 4446725 | 702.1.1.4 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack | 0.55 | 38.0 | 2.49e-01 | 73.8% | 19.4% |
| 3271679 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 41.0 | 2.96e-01 | 90.5% | 37.9% |
| 3426675 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.54 | 41.0 | 3.83e-01 | 95.2% | 64.4% |
| 3425088 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.53 | 38.0 | 3.47e-01 | 83.3% | 81.5% |
| 5070745 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 3.72e-01 | 97.6% | 66.7% |
| 5037144 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 37.0 | 2.88e-01 | 100.0% | 29.0% |
| 3330943 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.52 | 40.0 | 3.81e-01 | 100.0% | 69.1% |
| 3830187 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 41.0 | 3.82e-01 | 100.0% | 69.1% |
| 5031046 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 37.0 | 2.95e-01 | 100.0% | 33.0% |
| 4877330 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.50 | 39.0 | 2.51e-01 | 100.0% | 26.1% |
| 3819340 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.50 | 40.0 | 3.05e-01 | 100.0% | 35.0% |
| 3245798 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 42.0 | 2.22e-01 | 97.6% | 2.6% |
D2
medium
residues 6-87
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.74 | 59.0 | 5.47e-01 | 90.2% | 68.0% |
| 2ve3B00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.68 | 56.0 | 3.54e-01 | 90.2% | 39.6% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.67 | 51.0 | 4.11e-01 | 81.7% | 72.0% |
| 5m0nA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.64 | 50.0 | 3.22e-01 | 86.6% | 40.0% |
| 3awmA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.63 | 51.0 | 3.28e-01 | 90.2% | 41.5% |
| 3pvlA03 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.62 | 43.0 | 3.82e-01 | 72.0% | 53.4% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.60 | 42.0 | 4.13e-01 | 73.2% | 73.6% |
| 3rimB01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.58 | 50.0 | 3.28e-01 | 95.1% | 91.4% |
| 1d5rA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 36.0 | 2.89e-01 | 70.7% | 31.6% |
| 2qdjA03 | 1.10.472.140 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.51 | 35.0 | 3.18e-01 | 72.0% | 54.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3808594 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.89 | 62.0 | 3.95e-01 | 89.0% | 17.1% |
| 3510931 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.82 | 34.0 | 2.50e-01 | 90.2% | 17.0% |
| 3623074 | 4177.2.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › Inhibitor of kappaB kinase beta dimerization domain › Inhibitor of kappaB kinase beta dimerization domain | 0.69 | 54.0 | 3.57e-01 | 82.9% | 23.3% |
| 5034381 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.64 | 45.0 | 4.06e-01 | 74.4% | 54.8% |
| 3721687 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.62 | 54.0 | 4.76e-01 | 93.9% | 88.7% |
| 3539619 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.60 | 49.0 | 4.00e-01 | 89.0% | 74.0% |
| 3738195 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.57 | 44.0 | 4.24e-01 | 85.4% | 72.2% |
| 3253225 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.57 | 40.0 | 3.98e-01 | 73.2% | 97.6% |
| 3663783 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.56 | 45.0 | 3.14e-01 | 93.9% | 56.5% |
| 4101322 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.55 | 45.0 | 3.53e-01 | 96.3% | 94.5% |
| 4008764 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.54 | 37.0 | 3.66e-01 | 70.7% | 98.8% |
| 4376599 | 6102.1.1.1 ↗ | alpha arrays › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › N-terminal domain of segregation and condensation protein A, ScpA › SMC_ScpA | 0.53 | 45.0 | 3.35e-01 | 95.1% | 50.5% |