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KU594606.1__AMO43059.1__R1080702_050__00044

Bact-Vir

KU594606.1__AMO43059.1__R1080702_050__00044

Identity

Accession:
KU594606 ↗
Kingdom:
phage

Quality

76.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Bristolvirus› Cyanophage_S-RIM32

TaxID: 1278479

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-59
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.80 59.0 6.13e-01 100.0% 84.0%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.76 57.0 5.91e-01 100.0% 88.0%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 58.0 4.96e-01 100.0% 51.8%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 55.0 5.76e-01 100.0% 91.7%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 64.0 5.41e-01 100.0% 67.9%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 57.0 5.56e-01 100.0% 86.0%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.66 47.0 2.92e-01 88.7% 13.0%
2l8kA00 3.30.1330.220 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Arterivirus nonstructural protein 7 alpha 0.65 41.0 3.19e-01 73.6% 27.6%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 5.24e-01 100.0% 83.3%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 56.0 5.29e-01 100.0% 82.5%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.63 57.0 4.64e-01 100.0% 62.9%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 5.08e-01 100.0% 83.9%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.62 56.0 4.34e-01 100.0% 52.3%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 5.05e-01 100.0% 86.4%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.62 49.0 4.15e-01 84.9% 98.8%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.62 52.0 3.64e-01 96.2% 57.7%
1xg9A02 3.10.25.20 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › 0.61 47.0 4.53e-01 84.9% 91.9%
7d8gA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.61 54.0 3.77e-01 100.0% 55.1%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.60 51.0 3.98e-01 98.1% 64.2%
1dwnA00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.60 48.0 3.66e-01 88.7% 44.1%
3f5rA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 50.0 4.03e-01 100.0% 68.1%
4g1vA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 46.0 3.60e-01 88.7% 82.2%
4m1xD00 3.30.1360.240 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.57 46.0 4.13e-01 88.7% 88.9%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.56 42.0 3.68e-01 81.1% 98.7%
1y44A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 40.0 2.61e-01 81.1% 64.2%
6ygnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 42.0 3.32e-01 83.0% 70.4%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.55 43.0 3.45e-01 94.3% 82.8%
2e4mC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 43.0 3.26e-01 92.5% 98.6%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 42.0 4.04e-01 92.5% 75.4%
2v5yA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.50e-01 88.7% 91.2%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.72e-01 100.0% 65.5%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.54 40.0 3.51e-01 86.8% 88.2%
2pmlX01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 43.0 3.31e-01 88.7% 74.2%
4ljzC06 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 45.0 4.01e-01 94.3% 89.3%
5jenA02 3.90.640.20 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Heat-shock cognate protein, ATPase 0.53 44.0 3.71e-01 98.1% 92.9%
4ydzA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.29e-01 94.3% 52.6%
3zqsA02 3.10.110.20 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › RWD domain-like 0.52 38.0 3.18e-01 86.8% 43.9%
3dlbA04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 44.0 3.16e-01 100.0% 97.1%
4nasB01 3.30.70.150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain 0.51 37.0 2.92e-01 77.4% 67.3%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 34.0 2.85e-01 71.7% 91.8%
7qrlA01 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.51 40.0 3.07e-01 90.6% 54.1%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 41.0 3.18e-01 96.2% 70.4%
4a18O00 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.51 40.0 3.22e-01 100.0% 64.9%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.51 37.0 2.74e-01 83.0% 29.5%
3njcA00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.50 39.0 2.89e-01 86.8% 55.6%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.50 40.0 3.69e-01 98.1% 67.5%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 67.0 6.65e-01 100.0% 78.2%
4972872 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.84 64.0 6.93e-01 100.0% 95.6%
2697704 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.83 62.0 5.79e-01 100.0% 64.6%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 65.0 6.47e-01 100.0% 81.8%
4937586 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.81 62.0 5.75e-01 100.0% 66.2%
5036647 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.81 63.0 5.70e-01 100.0% 62.9%
5040230 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.80 62.0 5.79e-01 100.0% 67.7%
4964421 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.79 61.0 5.70e-01 100.0% 67.7%
4981036 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.78 58.0 6.16e-01 100.0% 95.6%
4932588 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.76 58.0 5.45e-01 100.0% 67.7%
3234110 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.70 49.0 3.26e-01 73.6% 20.0%
3387378 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 62.0 5.27e-01 100.0% 69.4%
5055961 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 61.0 5.29e-01 100.0% 66.3%
5029643 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 61.0 5.29e-01 100.0% 66.3%
4073433 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 60.0 5.20e-01 100.0% 75.0%
3964889 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 59.0 5.23e-01 100.0% 70.7%
4951143 295.1.1.53 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3467 0.66 50.0 4.97e-01 83.0% 87.3%
3799750 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.66 46.0 3.09e-01 73.6% 19.5%
4976896 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 58.0 4.81e-01 100.0% 55.8%
4281699 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.19e-01 100.0% 78.7%
4425420 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 59.0 5.00e-01 100.0% 76.5%
4162968 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 58.0 5.08e-01 100.0% 78.5%
4078162 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.14e-01 100.0% 79.7%
4952498 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.64 55.0 4.57e-01 100.0% 61.6%
4517901 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 56.0 4.65e-01 100.0% 74.7%
4340758 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 57.0 5.18e-01 100.0% 85.7%
4645538 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.60 54.0 4.78e-01 100.0% 74.7%
3703130 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 49.0 4.37e-01 88.7% 82.7%
3274501 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 50.0 3.61e-01 94.3% 74.2%
4196537 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.60 53.0 4.69e-01 98.1% 76.0%
3995788 389.4.1.7 ↗ few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 0.60 41.0 3.96e-01 71.7% 66.7%
3259968 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.59 48.0 4.16e-01 92.5% 67.1%
3322788 3270.1.1.1 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.58 50.0 4.13e-01 98.1% 81.0%
4030398 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.58 53.0 4.93e-01 100.0% 92.3%
4398865 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.58 49.0 4.17e-01 100.0% 84.2%
5030199 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.57 50.0 3.10e-01 100.0% 19.7%
4344687 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.56 46.0 3.76e-01 92.5% 66.7%
4990210 283.2.1.8 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29994 0.56 44.0 3.64e-01 86.8% 61.1%
3457651 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 46.0 2.85e-01 92.5% 31.3%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 47.0 4.10e-01 100.0% 97.6%
3389979 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 39.0 3.06e-01 77.4% 74.2%
5044839 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.55 44.0 3.55e-01 92.5% 55.5%
3741335 109.4.1.338 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 0.54 44.0 2.81e-01 96.2% 33.2%
4887391 4042.1.1.1 ↗ a+b complex topology › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › barrel domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_6 0.54 45.0 3.37e-01 94.3% 48.9%
3177185 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.50 40.0 2.96e-01 94.3% 61.8%
3938002 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.50 42.0 2.74e-01 98.1% 30.2%