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KU594606.1__AMO43156.1__R1080702_147__00141
Bact-VirKU594606.1__AMO43156.1__R1080702_147__00141
Identity
- Accession:
- KU594606 ↗
- Kingdom:
- phage
Quality
70.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Bristolvirus›
Cyanophage_S-RIM32
TaxID: 1278479
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 84-121
D2
medium
residues 1-71
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.69 | 46.0 | 4.07e-01 | 76.1% | 48.0% |
| 2qvwA04 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.67 | 53.0 | 4.14e-01 | 84.5% | 84.1% |
| 3cwcA02 | 3.90.1510.10 | Alpha Beta › Alpha-Beta Complex › Glycerate kinase, domain 2 › Glycerate kinase, domain 2 | 0.64 | 45.0 | 3.09e-01 | 84.5% | 22.1% |
| 1kx5A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.62 | 44.0 | 3.60e-01 | 74.6% | 58.5% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 36.0 | 3.73e-01 | 73.2% | 61.8% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.58 | 46.0 | 3.29e-01 | 87.3% | 64.8% |
| 1fcqA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 48.0 | 3.14e-01 | 95.8% | 49.4% |
| 2hydA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.53 | 43.0 | 2.80e-01 | 90.1% | 53.9% |
| 3gaeA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.51 | 38.0 | 2.76e-01 | 85.9% | 43.9% |
| 3pieC01 | 3.40.50.12390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 43.0 | 2.91e-01 | 94.4% | 99.2% |
| 1kq4A00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.50 | 39.0 | 2.93e-01 | 88.7% | 40.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3506153 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.72 | 47.0 | 4.49e-01 | 76.1% | 57.8% |
| 3171915 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.70 | 46.0 | 4.34e-01 | 74.6% | 56.5% |
| 2427 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.69 | 46.0 | 4.21e-01 | 76.1% | 54.4% |
| 4327215 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.62 | 45.0 | 3.82e-01 | 76.1% | 67.8% |
| 3633710 | 2002.1.1.74 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2 | 0.62 | 42.0 | 2.63e-01 | 70.4% | 26.5% |
| 3886591 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.61 | 36.0 | 3.46e-01 | 70.4% | 52.5% |
| 3991598 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.61 | 37.0 | 3.57e-01 | 73.2% | 55.0% |
| 4000902 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 36.0 | 3.60e-01 | 76.1% | 61.3% |
| 3790416 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.57 | 36.0 | 3.61e-01 | 76.1% | 61.3% |
| 3944963 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 45.0 | 3.37e-01 | 91.5% | 82.1% |
| 3931610 | 300.1.1.9 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › MIT_C | 0.55 | 46.0 | 3.35e-01 | 90.1% | 49.2% |
| 3653641 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.54 | 37.0 | 2.47e-01 | 70.4% | 19.3% |
| 4283614 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 39.0 | 3.56e-01 | 87.3% | 61.9% |
| 3261862 | 101.1.2.493 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26557 | 0.51 | 33.0 | 3.19e-01 | 94.4% | 55.3% |