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KU640380.1__AMQ66530.1__X__00048

Bact-Vir

KU640380.1__AMQ66530.1__X__00048

Identity

Accession:
KU640380 ↗
Kingdom:
phage

Quality

79.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-90
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zfdB00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.68 48.0 4.31e-01 100.0% 54.3%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.67 47.0 4.27e-01 100.0% 54.8%
6sulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 50.0 4.67e-01 80.2% 98.1%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.65 59.0 4.98e-01 100.0% 62.6%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.64 46.0 4.01e-01 100.0% 50.0%
6gbsA02 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.64 48.0 3.64e-01 100.0% 33.0%
1xuvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 58.0 4.64e-01 100.0% 68.7%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.63 54.0 4.56e-01 100.0% 56.9%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 57.0 4.68e-01 100.0% 70.6%
2q83B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 44.0 4.24e-01 74.4% 90.9%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 56.0 4.81e-01 100.0% 73.3%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 42.0 3.54e-01 74.4% 42.6%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.61 43.0 4.17e-01 73.3% 87.4%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 40.0 3.33e-01 82.6% 36.2%
2wqlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 55.0 4.56e-01 100.0% 75.0%
1tw0A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 54.0 4.44e-01 100.0% 72.6%
3dxpA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 43.0 4.19e-01 74.4% 98.9%
1jqpA01 2.40.128.80 Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain 0.60 42.0 3.89e-01 74.4% 85.7%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 38.0 3.31e-01 93.0% 41.7%
3ni8A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 53.0 4.52e-01 100.0% 70.7%
6fucA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 42.0 4.26e-01 75.6% 98.8%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 52.0 4.40e-01 100.0% 70.6%
1v9kA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.58 37.0 2.76e-01 100.0% 24.7%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.58 51.0 4.03e-01 100.0% 64.1%
1q7hA01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.57 35.0 3.84e-01 70.9% 78.5%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 49.0 4.28e-01 100.0% 66.7%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 3.37e-01 79.1% 45.0%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 39.0 3.99e-01 72.1% 95.2%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 51.0 4.03e-01 100.0% 53.8%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.56 41.0 4.05e-01 77.9% 92.3%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 49.0 4.21e-01 100.0% 68.1%
2yfoA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.55 39.0 2.70e-01 74.4% 61.7%
3ewkA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 50.0 4.64e-01 100.0% 96.3%
3d7rA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 41.0 2.89e-01 81.4% 98.0%
1ew3A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 42.0 3.53e-01 86.0% 51.6%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.54 42.0 4.24e-01 97.7% 84.5%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 32.0 3.08e-01 97.7% 50.5%
3we5A00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.54 41.0 3.47e-01 81.4% 55.3%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.53 37.0 3.47e-01 81.4% 57.8%
4v19O00 2.40.150.20 Mainly Beta › Beta Barrel › Ribosomal Protein L14 › Ribosomal protein L14/L23 0.53 37.0 3.40e-01 73.3% 67.8%
3pxpA02 3.30.450.180 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 47.0 3.62e-01 100.0% 75.4%
4umwA04 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.52 43.0 3.94e-01 93.0% 87.9%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 3.80e-01 100.0% 74.5%
2ykfA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 46.0 3.86e-01 100.0% 68.5%
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 3.88e-01 100.0% 69.4%
2veaA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 44.0 3.92e-01 100.0% 66.9%
2x3lA01 3.90.1150.150 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.51 43.0 4.10e-01 95.3% 79.0%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.50 37.0 3.39e-01 80.2% 84.0%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3242625 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.76 55.0 5.07e-01 100.0% 59.1%
5007802 331.4.1.36 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › PF27851 0.76 55.0 5.74e-01 100.0% 81.2%
4323155 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.72 55.0 5.27e-01 98.8% 70.0%
5004871 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.72 54.0 5.31e-01 100.0% 75.6%
3360656 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.70 49.0 4.33e-01 100.0% 50.0%
3579622 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.69 51.0 4.71e-01 100.0% 60.9%
3823427 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.69 51.0 4.51e-01 100.0% 53.6%
4948381 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.69 49.0 4.90e-01 100.0% 72.2%
4937958 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.69 48.0 3.20e-01 72.1% 28.6%
3962490 3513.1.1.4 a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA › PF27220 0.69 51.0 4.40e-01 100.0% 50.4%
4996248 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.69 49.0 4.89e-01 100.0% 72.2%
3808257 331.4.1.33 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CCB1 0.68 52.0 5.27e-01 100.0% 82.4%
3714612 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.67 56.0 4.51e-01 100.0% 47.3%
5073891 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.67 53.0 5.04e-01 100.0% 73.0%
4976589 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.66 47.0 4.56e-01 100.0% 67.4%
3846916 331.9.1.8 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 0.64 48.0 4.44e-01 100.0% 60.9%
5009503 331.3.1.7 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.63 56.0 4.80e-01 100.0% 74.3%
3277828 301.8.1.0 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase 0.63 56.0 4.74e-01 100.0% 74.5%
3953302 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.63 48.0 4.53e-01 100.0% 68.3%
3169357 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.62 49.0 4.58e-01 100.0% 68.2%
3687869 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.62 54.0 4.46e-01 100.0% 54.7%
5053461 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.62 56.0 4.40e-01 100.0% 59.4%
3889564 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.61 43.0 3.55e-01 100.0% 39.4%
2156956 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.61 54.0 4.59e-01 100.0% 71.0%
4954483 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 44.0 3.90e-01 100.0% 52.0%
3283094 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.61 56.0 4.23e-01 100.0% 46.7%
4470525 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.61 55.0 3.97e-01 100.0% 51.4%
3438388 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.61 46.0 4.03e-01 100.0% 52.6%
4635523 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.61 55.0 3.91e-01 100.0% 52.5%
4065996 3894.1.1.2 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfA_EBD 0.61 41.0 3.58e-01 96.5% 45.4%
4509362 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.60 45.0 3.12e-01 80.2% 38.0%
4987226 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.60 53.0 4.43e-01 100.0% 70.0%
3284176 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.59 50.0 4.47e-01 100.0% 65.8%
4221575 4099.1.1.52 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › FTA2 0.59 40.0 3.76e-01 82.6% 57.1%
3495285 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.59 46.0 3.87e-01 100.0% 48.7%
3965912 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.59 45.0 4.41e-01 100.0% 73.7%
3841571 331.18.1.0 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc 0.59 43.0 3.43e-01 100.0% 37.2%
3965983 223.1.1.6 a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.59 45.0 3.25e-01 100.0% 29.2%
370870 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 52.0 4.47e-01 100.0% 73.7%
2121270 223.1.1.6 a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 0.58 44.0 4.31e-01 100.0% 73.7%
4640183 12.3.1.40 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.58 43.0 3.26e-01 80.2% 44.1%
3582979 5.1.4.156 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ge1_WD40 0.57 50.0 3.21e-01 100.0% 81.8%
4209630 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.57 51.0 3.85e-01 100.0% 62.4%
3402152 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.56 40.0 3.60e-01 79.1% 53.3%
3575893 3459.1.1.1 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.54 44.0 4.26e-01 91.9% 78.9%
3283627 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.54 47.0 4.01e-01 100.0% 67.3%
3259285 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.54 47.0 3.28e-01 100.0% 74.3%
3587042 331.3.1.32 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3284 0.53 48.0 4.13e-01 100.0% 73.3%
3202136 331.3.1.2 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A 0.53 48.0 3.60e-01 100.0% 45.7%
3497279 59.1.4.0 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 0.53 38.0 3.21e-01 76.7% 56.8%
3629857 5.1.4.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 0.53 42.0 2.71e-01 88.4% 21.2%
5053568 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 41.0 3.55e-01 100.0% 54.1%
4108467 3459.1.1.1 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.52 42.0 4.24e-01 95.3% 89.4%
3283544 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.52 46.0 3.34e-01 100.0% 50.0%
4596504 331.10.2.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc 0.52 44.0 3.54e-01 100.0% 46.3%
3998243 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 42.0 2.79e-01 88.4% 24.1%
3281720 223.1.1.36 a+b three layers › Profilin-like › sensor domains › sensor domains › MLTR_LBD 0.51 46.0 3.84e-01 100.0% 92.0%
3716707 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 44.0 3.57e-01 100.0% 84.4%
4975610 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.51 42.0 3.84e-01 93.0% 88.3%
3238782 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.50 44.0 3.43e-01 100.0% 45.5%
3207771 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.50 38.0 2.97e-01 80.2% 36.8%
3731812 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.50 44.0 3.64e-01 100.0% 86.3%
5065450 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 43.0 3.53e-01 100.0% 51.6%
5001593 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 46.0 3.89e-01 100.0% 65.0%