Back to structures

KU640380.1__AMQ66545.1__X__00063

Bact-Vir

KU640380.1__AMQ66545.1__X__00063

Identity

Accession:
KU640380 ↗
Kingdom:
phage

Quality

76.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-36
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e5tA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.66 44.0 2.52e-01 100.0% 6.2%
2x49A04 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.65 50.0 3.82e-01 100.0% 65.7%
7febA03 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.63 49.0 3.78e-01 100.0% 69.6%
7oslA02 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.58 41.0 3.26e-01 100.0% 32.0%
1twyD02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 44.0 2.95e-01 93.9% 34.8%
2l1sA00 3.10.450.160 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr 0.53 36.0 2.91e-01 72.7% 98.8%
4omfG02 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 37.0 3.05e-01 87.9% 33.3%
3fk5A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 36.0 2.67e-01 100.0% 23.6%
4aefA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.50 43.0 2.49e-01 100.0% 96.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4490179 109.4.1.1289 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30856 0.60 47.0 2.78e-01 100.0% 11.5%
3689323 4096.1.1.1 a+b two layers › NAP-like › NAP-like › NAP-like › NAP 0.60 47.0 2.88e-01 100.0% 26.5%
3514943 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 38.0 2.98e-01 87.9% 30.4%
4014738 2003.1.5.79 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.54 43.0 2.71e-01 100.0% 41.2%
3501027 2494.1.1.1 a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase 0.54 41.0 2.83e-01 97.0% 66.0%
3592366 2494.1.1.0 a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) 0.54 41.0 2.83e-01 97.0% 67.3%
2429478 5050.1.1.2 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 0.52 40.0 2.49e-01 100.0% 66.0%
2530252 2500.1.1.3 a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › PFL-like 0.51 42.0 2.30e-01 100.0% 16.1%
5011772 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.50 41.0 3.81e-01 100.0% 77.8%