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KU665491.1__AMQ66739.1__X__00080
Bact-VirKU665491.1__AMQ66739.1__X__00080
Identity
- Accession:
- KU665491 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Taxonomy
TaxID: 1796993
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-69
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a64A02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.69 | 57.0 | 4.73e-01 | 100.0% | 56.4% |
| 2ddhA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.68 | 54.0 | 4.28e-01 | 100.0% | 43.2% |
| 7powA01 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.65 | 54.0 | 3.86e-01 | 100.0% | 33.3% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.64 | 53.0 | 5.35e-01 | 100.0% | 98.2% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.63 | 43.0 | 3.37e-01 | 70.7% | 32.8% |
| 3dv9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 44.0 | 4.20e-01 | 74.1% | 98.6% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.63 | 51.0 | 3.80e-01 | 91.4% | 89.4% |
| 4jd9G00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.62 | 44.0 | 3.48e-01 | 74.1% | 48.3% |
| 3l8kA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 42.0 | 2.84e-01 | 70.7% | 94.9% |
| 4u04A02 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.62 | 53.0 | 3.55e-01 | 100.0% | 24.9% |
| 2g2dA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.61 | 42.0 | 3.14e-01 | 72.4% | 28.7% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 43.0 | 3.78e-01 | 75.9% | 93.4% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.60 | 42.0 | 3.79e-01 | 72.4% | 100.0% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.60 | 46.0 | 3.77e-01 | 84.5% | 51.3% |
| 1pn9B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 49.0 | 3.93e-01 | 100.0% | 61.5% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 43.0 | 3.28e-01 | 100.0% | 31.0% |
| 6ll8A01 | 3.90.1640.10 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) | 0.57 | 46.0 | 3.43e-01 | 100.0% | 40.9% |
| 7v8fB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.57 | 46.0 | 4.08e-01 | 94.8% | 66.3% |
| 4hg2A02 | 1.10.10.2560 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 39.0 | 3.79e-01 | 75.9% | 61.8% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.56 | 46.0 | 3.49e-01 | 91.4% | 57.3% |
| 1e7uA05 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.55 | 44.0 | 3.17e-01 | 91.4% | 52.9% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.55 | 47.0 | 4.25e-01 | 100.0% | 86.7% |
| 1h99A02 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.54 | 45.0 | 3.85e-01 | 100.0% | 91.5% |
| 1q1qA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 2.74e-01 | 87.9% | 85.3% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 45.0 | 4.21e-01 | 100.0% | 90.7% |
| 4eekA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 37.0 | 3.56e-01 | 72.4% | 98.5% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 41.0 | 3.79e-01 | 93.1% | 67.5% |
| 1kvkA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.51 | 43.0 | 3.33e-01 | 100.0% | 55.4% |
| 1a8uA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 40.0 | 2.74e-01 | 100.0% | 67.1% |
| 2llwA00 | 1.10.260.100 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.50 | 38.0 | 3.68e-01 | 100.0% | 73.2% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3439871 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.80 | 61.0 | 4.06e-01 | 100.0% | 21.8% |
| 3370036 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.77 | 58.0 | 4.25e-01 | 100.0% | 30.0% |
| 3269613 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.75 | 66.0 | 3.88e-01 | 100.0% | 15.0% |
| 3178356 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.75 | 65.0 | 3.99e-01 | 100.0% | 22.8% |
| 3173502 | 4982.1.1.4 ↗ | alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › SYS1 | 0.75 | 65.0 | 4.96e-01 | 100.0% | 54.3% |
| 4666185 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.73 | 55.0 | 3.25e-01 | 81.0% | 13.3% |
| 3599703 | 109.4.1.1775 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF5393 | 0.73 | 63.0 | 4.46e-01 | 100.0% | 35.0% |
| 3198937 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.73 | 64.0 | 5.55e-01 | 100.0% | 71.1% |
| 4635290 | 4967.1.1.25 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N | 0.73 | 63.0 | 3.79e-01 | 100.0% | 16.5% |
| 4223395 | 4967.1.1.25 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N | 0.72 | 64.0 | 3.82e-01 | 100.0% | 26.8% |
| 4187457 | 4967.1.1.6 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 | 0.72 | 63.0 | 4.88e-01 | 100.0% | 55.4% |
| 4099141 | 4967.1.1.6 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 | 0.72 | 63.0 | 4.65e-01 | 100.0% | 46.5% |
| 3779653 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.71 | 61.0 | 4.85e-01 | 100.0% | 52.8% |
| 4241274 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.71 | 63.0 | 3.75e-01 | 100.0% | 16.9% |
| 3291199 | 109.4.1.45 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BTAD | 0.71 | 61.0 | 4.42e-01 | 100.0% | 35.0% |
| 4552467 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.71 | 62.0 | 3.85e-01 | 100.0% | 25.0% |
| 3256154 | 192.4.1.18 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › PF26116 | 0.69 | 54.0 | 4.09e-01 | 89.7% | 47.1% |
| 3606822 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.68 | 57.0 | 4.81e-01 | 94.8% | 89.0% |
| 3605712 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 56.0 | 5.19e-01 | 100.0% | 86.3% |
| 5040466 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.67 | 59.0 | 5.44e-01 | 100.0% | 87.8% |
| 3343837 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.66 | 59.0 | 4.84e-01 | 100.0% | 81.0% |
| 4886009 | 3435.1.1.1 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › RdgC | 0.66 | 45.0 | 2.86e-01 | 72.4% | 25.7% |
| 3259657 | 605.8.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like | 0.64 | 45.0 | 4.27e-01 | 74.1% | 97.1% |
| 3920479 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 52.0 | 3.26e-01 | 100.0% | 37.6% |
| 4562263 | 3435.1.1.1 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › RdgC | 0.63 | 44.0 | 2.81e-01 | 74.1% | 24.3% |
| 4260399 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.63 | 53.0 | 4.10e-01 | 100.0% | 88.3% |
| 3715667 | 192.4.1.18 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › PF26116 | 0.62 | 54.0 | 4.64e-01 | 100.0% | 90.5% |
| 3583793 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.62 | 43.0 | 3.33e-01 | 74.1% | 50.8% |
| 3883768 | 5086.1.1.101 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › SH3BP5 | 0.62 | 43.0 | 3.41e-01 | 79.3% | 34.4% |
| 1348627 | 6152.1.1.1 ↗ | alpha arrays › Helical domain in Orf11 › Helical domain in Orf11 › Helical domain in Orf11 › NAT_N | 0.61 | 44.0 | 3.72e-01 | 79.3% | 54.7% |
| 3996047 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.60 | 47.0 | 4.38e-01 | 89.7% | 88.0% |
| 5064355 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.60 | 48.0 | 4.37e-01 | 100.0% | 95.6% |
| 4928215 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.59 | 48.0 | 4.27e-01 | 100.0% | 90.5% |
| 137614 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.58 | 44.0 | 2.68e-01 | 82.8% | 16.5% |
| 4644692 | 4953.2.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain | 0.58 | 49.0 | 4.43e-01 | 100.0% | 68.2% |
| 4965582 | 4953.2.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain | 0.56 | 49.0 | 4.28e-01 | 100.0% | 68.9% |
| 3862034 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.56 | 48.0 | 4.28e-01 | 96.6% | 84.7% |
| 55657 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.56 | 47.0 | 4.20e-01 | 100.0% | 92.2% |
| 3188613 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.56 | 46.0 | 4.03e-01 | 100.0% | 64.0% |
| 3437734 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.56 | 44.0 | 4.36e-01 | 100.0% | 87.7% |
| 3277587 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.56 | 45.0 | 3.82e-01 | 100.0% | 63.5% |
| 5041863 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.56 | 47.0 | 3.82e-01 | 100.0% | 60.8% |
| 3588554 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.55 | 47.0 | 3.94e-01 | 100.0% | 94.3% |
| 3714755 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.55 | 46.0 | 3.10e-01 | 100.0% | 47.6% |
| 3934701 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.54 | 45.0 | 3.17e-01 | 100.0% | 46.5% |
| None | — | 0.54 | 43.0 | 2.94e-01 | 94.8% | 28.2% | |
| 4341411 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.53 | 45.0 | 4.26e-01 | 100.0% | 85.1% |
| 5032595 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.53 | 42.0 | 2.57e-01 | 98.3% | 12.4% |