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KU682439.2__AMQ66049.1__AAY80_071__00071
Bact-VirKU682439.2__AMQ66049.1__AAY80_071__00071
Identity
- Accession:
- KU682439 ↗
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Taxonomy
TaxID: 1651816
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-93
Domain cluster:
rep: LSDeep1_scaffold_41_prodigal-single.1__X__X__00258__D86-132
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vjwA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.70 | 49.0 | 3.64e-01 | 90.6% | 29.0% |
| 4awyB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 39.0 | 2.49e-01 | 88.7% | 12.2% |
| 1qyaB01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.60 | 38.0 | 2.78e-01 | 86.8% | 22.9% |
| 7t71A01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.60 | 48.0 | 3.28e-01 | 92.5% | 75.2% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.60 | 45.0 | 3.33e-01 | 94.3% | 29.4% |
| 2kjxA01 | 3.30.720.220 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.60 | 44.0 | 4.40e-01 | 84.9% | 83.0% |
| 4bwiB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 45.0 | 3.17e-01 | 90.6% | 34.4% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.58 | 40.0 | 3.99e-01 | 90.6% | 70.2% |
| 2bcfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 43.0 | 2.83e-01 | 83.0% | 47.1% |
| 1z2nX02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 46.0 | 3.79e-01 | 96.2% | 71.6% |
| 4r70B01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 45.0 | 3.08e-01 | 90.6% | 23.6% |
| 1wfqA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 43.0 | 3.95e-01 | 84.9% | 94.5% |
| 4r70B03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.57 | 45.0 | 3.30e-01 | 94.3% | 31.5% |
| 4ehoB03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.56 | 46.0 | 3.25e-01 | 96.2% | 37.4% |
| 4o01D01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.56 | 44.0 | 3.01e-01 | 90.6% | 23.2% |
| 6p58A00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 43.0 | 3.28e-01 | 94.3% | 35.3% |
| 3mmhA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 41.0 | 3.03e-01 | 88.7% | 28.1% |
| 3u1wA02 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 41.0 | 3.88e-01 | 86.8% | 74.2% |
| 1lgpA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.53 | 43.0 | 3.34e-01 | 90.6% | 41.6% |
| 5dvhA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 39.0 | 2.81e-01 | 84.9% | 75.7% |
| 1cb8A03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.52 | 41.0 | 3.35e-01 | 90.6% | 44.5% |
| 3sluA02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 45.0 | 3.36e-01 | 100.0% | 96.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4868887 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 42.0 | 5.02e-01 | 83.0% | 94.1% |
| 3826758 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.69 | 53.0 | 4.29e-01 | 83.0% | 99.0% |
| 4369033 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.69 | 39.0 | 3.21e-01 | 86.8% | 30.5% |
| 3816395 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.68 | 51.0 | 3.77e-01 | 83.0% | 81.7% |
| 3813512 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.63 | 47.0 | 3.79e-01 | 83.0% | 90.0% |
| 3436078 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.62 | 47.0 | 3.78e-01 | 88.7% | 88.3% |
| 5014277 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.61 | 43.0 | 3.70e-01 | 92.5% | 45.9% |
| 3737241 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 53.0 | 3.10e-01 | 100.0% | 12.8% |
| 4028728 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.60 | 42.0 | 4.21e-01 | 86.8% | 72.7% |
| 4013832 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.59 | 46.0 | 3.45e-01 | 86.8% | 34.1% |
| 4167611 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.59 | 45.0 | 3.28e-01 | 90.6% | 28.7% |
| 4962456 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.58 | 47.0 | 3.34e-01 | 94.3% | 30.9% |
| 4274024 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.55 | 47.0 | 3.27e-01 | 100.0% | 81.5% |
| 3526345 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.55 | 41.0 | 3.25e-01 | 88.7% | 36.8% |
| 3246846 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 37.0 | 3.36e-01 | 79.2% | 96.2% |
| 5041425 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.52 | 41.0 | 3.06e-01 | 94.3% | 30.9% |
| 3959920 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 40.0 | 3.29e-01 | 92.5% | 74.8% |
| 4871764 | 223.1.1.1 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PHY | 0.52 | 40.0 | 3.21e-01 | 96.2% | 38.5% |