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KU682439.2__AMQ66108.1__AAY80_212__00182
Bact-VirKU682439.2__AMQ66108.1__AAY80_212__00182
Identity
- Accession:
- KU682439 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Taxonomy
TaxID: 1651816
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-65
Domain cluster:
rep: OK040790.1__UDL16018.1__SEA_PUMPERNICKEL_268__00227__D2-58
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.81 | 50.0 | 4.17e-01 | 100.0% | 38.5% |
| 4iauA01 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.71 | 39.0 | 3.52e-01 | 100.0% | 39.7% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 50.0 | 4.87e-01 | 100.0% | 68.2% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 53.0 | 5.42e-01 | 100.0% | 86.2% |
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.65 | 41.0 | 2.47e-01 | 100.0% | 10.0% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 46.0 | 5.04e-01 | 98.3% | 91.8% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 43.0 | 3.66e-01 | 100.0% | 44.9% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 49.0 | 4.42e-01 | 100.0% | 65.1% |
| 4qu7A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 47.0 | 4.25e-01 | 89.8% | 64.2% |
| 3pjyA00 | 2.60.120.1140 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 | 0.58 | 51.0 | 3.98e-01 | 100.0% | 92.2% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 43.0 | 2.51e-01 | 84.7% | 71.5% |
| 4jzjC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 3.35e-01 | 74.6% | 88.5% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 44.0 | 3.27e-01 | 100.0% | 34.5% |
| 2au3A02 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.56 | 44.0 | 3.59e-01 | 91.5% | 60.6% |
| 1eqnB01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.56 | 44.0 | 3.61e-01 | 93.2% | 61.1% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.56 | 47.0 | 4.14e-01 | 100.0% | 63.4% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.56 | 44.0 | 3.49e-01 | 100.0% | 42.5% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.55 | 37.0 | 4.13e-01 | 71.2% | 89.1% |
| 1xf1A02 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.55 | 46.0 | 3.56e-01 | 100.0% | 79.7% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 39.0 | 2.97e-01 | 100.0% | 30.2% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 38.0 | 3.22e-01 | 76.3% | 94.3% |
| 2wy3B00 | 2.60.40.1990 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 40.0 | 3.19e-01 | 84.7% | 85.4% |
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.53 | 41.0 | 3.02e-01 | 88.1% | 96.7% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 39.0 | 3.37e-01 | 81.4% | 63.3% |
| 1e0yA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 38.0 | 3.18e-01 | 100.0% | 44.1% |
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 44.0 | 3.20e-01 | 100.0% | 80.1% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 40.0 | 3.41e-01 | 100.0% | 52.5% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3392470 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.73 | 44.0 | 5.00e-01 | 100.0% | 80.0% |
| 4046039 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.66 | 53.0 | 4.73e-01 | 89.8% | 74.1% |
| 4383296 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.65 | 51.0 | 4.68e-01 | 88.1% | 72.5% |
| 3773259 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.64 | 47.0 | 4.04e-01 | 79.7% | 74.7% |
| 5045215 | 207.1.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 | 0.64 | 40.0 | 2.58e-01 | 100.0% | 14.3% |
| 3954042 | 2.1.1.94 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TLP1_add_C | 0.63 | 46.0 | 4.25e-01 | 76.3% | 66.2% |
| 4031509 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 47.0 | 4.68e-01 | 100.0% | 78.3% |
| 3227025 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 54.0 | 5.37e-01 | 100.0% | 95.0% |
| 4990442 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.59 | 53.0 | 4.75e-01 | 100.0% | 73.8% |
| 3387388 | 4023.1.1.1 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N | 0.58 | 47.0 | 3.76e-01 | 93.2% | 61.6% |
| 3252386 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.57 | 41.0 | 3.17e-01 | 81.4% | 91.0% |
| 4157635 | 4023.1.1.1 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N | 0.56 | 45.0 | 3.61e-01 | 91.5% | 62.4% |
| 3521199 | 220.1.1.26 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II | 0.56 | 45.0 | 3.65e-01 | 94.9% | 83.1% |
| 3442191 | 10.35.1.1 ↗ | beta sandwiches › jelly-roll › ER-derived vesicles protein Erv41p lumenal domain › ER-derived vesicles protein Erv41p lumenal domain › COPIIcoated_ERV,ERGIC_N | 0.56 | 39.0 | 2.70e-01 | 72.9% | 81.8% |
| 3895056 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.56 | 38.0 | 3.12e-01 | 72.9% | 83.3% |
| 3589490 | 4023.1.1.1 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N | 0.56 | 45.0 | 3.55e-01 | 93.2% | 61.5% |
| 3560815 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.56 | 39.0 | 3.13e-01 | 74.6% | 90.4% |
| 3882479 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 38.0 | 3.01e-01 | 72.9% | 74.1% |
| 5004624 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 44.0 | 3.93e-01 | 94.9% | 80.0% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.55 | 47.0 | 4.00e-01 | 100.0% | 62.9% |
| 3273324 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.53 | 43.0 | 2.59e-01 | 91.5% | 17.6% |
| 3907395 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.53 | 40.0 | 3.33e-01 | 100.0% | 48.0% |
| 4270966 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 39.0 | 3.69e-01 | 84.7% | 85.3% |
| 3511356 | 4056.1.1.1 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 | 0.52 | 43.0 | 3.71e-01 | 100.0% | 97.1% |
| 3942485 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.51 | 44.0 | 3.55e-01 | 100.0% | 70.0% |