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KU686209.1__AOV61312.1__T191209_052__00052
Bact-VirKU686209.1__AOV61312.1__T191209_052__00052
Identity
- Accession:
- KU686209 ↗
- Kingdom:
- phage
Quality
95.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Alisovirus›
Synechococcus_phage_S-CAM22
TaxID: 1883365
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-33
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j78A05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.89 | 77.0 | 6.30e-01 | 100.0% | 56.7% |
| 2qvwA04 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.83 | 71.0 | 4.60e-01 | 100.0% | 24.8% |
| 1ezjA01 | 1.10.287.320 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Viral phosphoprotein oligmorisation site domain | 0.79 | 53.0 | 4.26e-01 | 78.8% | 37.1% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.72 | 58.0 | 4.01e-01 | 90.9% | 28.2% |
| 3qybA02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.70 | 51.0 | 3.82e-01 | 87.9% | 30.1% |
| 1zjcA01 | 3.40.1830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) | 0.66 | 55.0 | 3.45e-01 | 97.0% | 40.6% |
| 1uqwA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.66 | 55.0 | 3.36e-01 | 100.0% | 28.0% |
| 5zr4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 47.0 | 3.52e-01 | 93.9% | 29.4% |
| 1vb3A01 | 3.90.1380.10 | Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain | 0.59 | 44.0 | 3.42e-01 | 81.8% | 34.6% |
| 2ekfA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 41.0 | 3.97e-01 | 90.9% | 78.3% |
| 3e21A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.56 | 46.0 | 4.43e-01 | 90.9% | 80.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3685507 | 109.2.1.39 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Ldi | 0.90 | 80.0 | 4.40e-01 | 100.0% | 19.3% |
| None | — | 0.81 | 67.0 | 3.81e-01 | 97.0% | 9.3% | |
| 3416338 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 60.0 | 5.49e-01 | 90.9% | 68.9% |
| 3392367 | 103.1.1.95 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28512 | 0.75 | 56.0 | 4.98e-01 | 84.8% | 58.0% |
| 5000459 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.73 | 59.0 | 3.68e-01 | 100.0% | 16.5% |
| 3817082 | 103.1.1.87 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_At5g58720 | 0.64 | 46.0 | 4.56e-01 | 90.9% | 75.0% |