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KU708004.1__AMW64462.1__AH14a_p02__00002
Bact-VirKU708004.1__AMW64462.1__AH14a_p02__00002
Identity
- Accession:
- KU708004 ↗
- Kingdom:
- phage
Quality
90.4
mean pLDDT
Taxonomy
TaxID: 1805958
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-50
Domain cluster:
rep: OM049504.1__UIS65508.1__X__00080__D4-52
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13986.12 best | DUF4224 | 49.0 | 6.40e-13 | 91.8% | 95.6% |
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4du5B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.63 | 48.0 | 3.01e-01 | 83.7% | 31.2% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.62 | 51.0 | 4.12e-01 | 100.0% | 60.2% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.61 | 50.0 | 3.88e-01 | 100.0% | 39.7% |
| 2pjsA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.61 | 49.0 | 3.93e-01 | 95.9% | 44.1% |
| 3zi1A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 46.0 | 3.45e-01 | 85.7% | 80.6% |
| 1hc7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 41.0 | 2.60e-01 | 73.5% | 43.1% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 40.0 | 2.76e-01 | 71.4% | 38.4% |
| 1n0uA03 | 3.90.1430.10 | Alpha Beta › Alpha-Beta Complex › Yeast translation eEF2 (G' domain) › Yeast translation eEF2 (G' domain) | 0.58 | 42.0 | 3.38e-01 | 79.6% | 43.9% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.58 | 47.0 | 3.66e-01 | 100.0% | 38.9% |
| 1g4dA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 48.0 | 4.39e-01 | 100.0% | 75.4% |
| 7bqjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 3.84e-01 | 100.0% | 56.8% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.56 | 44.0 | 4.16e-01 | 100.0% | 73.1% |
| 2bonA01 | 3.40.50.10330 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 | 0.55 | 43.0 | 3.23e-01 | 87.8% | 87.5% |
| 1fs7A01 | 1.10.1130.10 | Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A | 0.55 | 41.0 | 2.50e-01 | 81.6% | 58.4% |
| 6p2uA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.54 | 38.0 | 3.79e-01 | 77.6% | 75.0% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.54 | 43.0 | 3.50e-01 | 100.0% | 44.2% |
| 1wi9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 3.80e-01 | 83.7% | 77.6% |
| 1e1hB01 | 1.20.58.540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 43.0 | 3.52e-01 | 98.0% | 54.4% |
| 6swc801 | 3.30.30.170 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.53 | 43.0 | 3.43e-01 | 100.0% | 42.2% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.97e-01 | 100.0% | 74.6% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.84e-01 | 100.0% | 65.8% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.27e-01 | 83.7% | 80.5% |
| 2vqmA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.52 | 39.0 | 2.38e-01 | 85.7% | 77.5% |
| 1biaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.89e-01 | 93.9% | 73.4% |
| 4usaA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.52 | 42.0 | 3.28e-01 | 93.9% | 87.4% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.18e-01 | 100.0% | 34.8% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 42.0 | 3.09e-01 | 100.0% | 36.5% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 44.0 | 3.67e-01 | 100.0% | 56.7% |
| 2hs5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.64e-01 | 100.0% | 64.2% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.70e-01 | 100.0% | 63.9% |
| 3pvsA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 37.0 | 3.30e-01 | 81.6% | 86.8% |
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 39.0 | 3.06e-01 | 100.0% | 35.5% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5082561 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.67 | 56.0 | 5.60e-01 | 100.0% | 96.0% |
| 4932995 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.66 | 55.0 | 5.53e-01 | 100.0% | 96.0% |
| 3607004 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.66 | 51.0 | 4.47e-01 | 98.0% | 56.0% |
| 5047649 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.66 | 55.0 | 5.56e-01 | 100.0% | 96.0% |
| 4933561 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.65 | 55.0 | 5.35e-01 | 100.0% | 87.3% |
| 3930811 | 101.1.2.122 ↗ | alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K | 0.64 | 50.0 | 5.19e-01 | 95.9% | 93.3% |
| 139679 | 101.1.9.21 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N | 0.62 | 51.0 | 4.12e-01 | 100.0% | 60.2% |
| 3289439 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.61 | 51.0 | 4.99e-01 | 100.0% | 87.3% |
| 4994568 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.61 | 49.0 | 4.82e-01 | 100.0% | 87.3% |
| 4527553 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.61 | 49.0 | 4.86e-01 | 100.0% | 90.9% |
| 3577481 | 101.1.2.416 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Egal | 0.60 | 51.0 | 3.63e-01 | 100.0% | 38.7% |
| 4941453 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.59 | 49.0 | 3.91e-01 | 95.9% | 59.6% |
| 4986778 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.59 | 41.0 | 3.17e-01 | 75.5% | 40.0% |
| 4223228 | 101.1.9.21 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N | 0.59 | 49.0 | 4.17e-01 | 100.0% | 67.8% |
| 3972191 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.58 | 48.0 | 3.58e-01 | 98.0% | 33.6% |
| 4586962 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.58 | 46.0 | 3.52e-01 | 89.8% | 62.5% |
| 4668740 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.58 | 47.0 | 3.86e-01 | 100.0% | 47.6% |
| 3828246 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.58 | 45.0 | 3.52e-01 | 87.8% | 51.8% |
| 3941467 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.58 | 48.0 | 4.22e-01 | 100.0% | 61.3% |
| 3580147 | 109.4.1.1505 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_FBXO47 | 0.58 | 42.0 | 2.50e-01 | 77.6% | 25.1% |
| 3624335 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 50.0 | 3.44e-01 | 100.0% | 33.7% |
| 3387245 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.57 | 47.0 | 3.57e-01 | 100.0% | 36.3% |
| 4527970 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.57 | 44.0 | 3.01e-01 | 89.8% | 37.0% |
| 3271032 | 5050.1.1.2 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 | 0.56 | 45.0 | 2.56e-01 | 87.8% | 76.6% |
| 3279459 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.56 | 46.0 | 3.53e-01 | 98.0% | 38.2% |
| 4995595 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.56 | 43.0 | 2.83e-01 | 89.8% | 31.6% |
| 3284779 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.56 | 46.0 | 3.52e-01 | 98.0% | 37.6% |
| 3484726 | 101.1.2.416 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_Egal | 0.56 | 46.0 | 4.03e-01 | 98.0% | 70.0% |
| 4232456 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.56 | 43.0 | 3.46e-01 | 87.8% | 53.3% |
| 5005057 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.56 | 46.0 | 3.64e-01 | 100.0% | 42.6% |
| 3603679 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.56 | 45.0 | 3.53e-01 | 100.0% | 40.0% |
| 3284505 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.56 | 46.0 | 3.64e-01 | 100.0% | 42.6% |
| 4985324 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.55 | 46.0 | 3.33e-01 | 100.0% | 31.6% |
| 3284986 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.55 | 44.0 | 3.47e-01 | 98.0% | 39.2% |
| 3908381 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.55 | 42.0 | 3.50e-01 | 87.8% | 67.4% |
| 3921946 | 101.1.2.507 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_TANC1 | 0.54 | 42.0 | 3.03e-01 | 87.8% | 40.0% |
| 3690576 | 5001.1.1.32 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Solute_trans_a | 0.54 | 43.0 | 2.70e-01 | 98.0% | 78.8% |
| 3955736 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 37.0 | 3.48e-01 | 71.4% | 75.9% |
| 3320650 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.53 | 40.0 | 3.33e-01 | 87.8% | 59.0% |
| 4947701 | 101.1.2.882 ↗ | alpha arrays › HTH › HTH › winged helix domain › FeoA | 0.53 | 44.0 | 3.53e-01 | 100.0% | 46.0% |
| 3879122 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 39.0 | 2.97e-01 | 81.6% | 50.8% |
| 4992861 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.53 | 41.0 | 3.41e-01 | 89.8% | 58.9% |
| 3179612 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.53 | 44.0 | 4.04e-01 | 100.0% | 71.4% |
| 3959369 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 40.0 | 3.14e-01 | 85.7% | 89.6% |
| 3943344 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.53 | 43.0 | 3.18e-01 | 100.0% | 32.9% |
| 4836986 | 101.1.2.120 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDRGK | 0.52 | 38.0 | 3.52e-01 | 87.8% | 60.0% |
| 3998495 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.68e-01 | 89.8% | 78.6% |
| 3487239 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 39.0 | 3.64e-01 | 83.7% | 69.2% |
| 3710117 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.55e-01 | 100.0% | 54.4% |
| 5077994 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.51 | 42.0 | 3.16e-01 | 100.0% | 39.3% |
| 5065138 | 101.1.2.222 ↗ | alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N | 0.51 | 41.0 | 3.43e-01 | 100.0% | 49.0% |
| 4021477 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 3.40e-01 | 89.8% | 77.6% |
| 4098825 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.56e-01 | 100.0% | 57.8% |
| 4943612 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.25e-01 | 100.0% | 51.7% |
| 3707832 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 3.36e-01 | 100.0% | 61.0% |
| 4653130 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.50 | 44.0 | 3.60e-01 | 100.0% | 60.0% |
| 5074774 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 41.0 | 3.52e-01 | 100.0% | 77.8% |
| 3933570 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.50 | 35.0 | 2.96e-01 | 79.6% | 88.0% |
| 4933456 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.50 | 40.0 | 3.61e-01 | 100.0% | 68.8% |