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KU708004.1__AMW64485.1__AH14a_p25__00025

Bact-Vir

KU708004.1__AMW64485.1__AH14a_p25__00025

Identity

Accession:
KU708004 ↗
Kingdom:
phage

Quality

76.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Miecznikowavirus› Pseudomonas_phage_phiAH14a

TaxID: 1805958

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-28_40-84
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.70 46.0 4.83e-01 80.3% 75.4%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.68 47.0 5.07e-01 83.1% 89.5%
6kmoB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.65 48.0 3.10e-01 78.9% 29.9%
4f0jA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 50.0 3.28e-01 90.1% 29.2%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 50.0 3.30e-01 90.1% 30.7%
3bxpB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 45.0 3.11e-01 83.1% 38.9%
1azoA00 3.40.600.10 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II 0.59 47.0 3.33e-01 85.9% 49.5%
3kdaA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 48.0 3.19e-01 90.1% 29.2%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 46.0 4.05e-01 85.9% 81.3%
3iiiA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 51.0 3.43e-01 100.0% 40.2%
2qlzA02 6.10.250.2960 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.58 52.0 4.91e-01 100.0% 89.5%
1u2eA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 50.0 3.30e-01 95.8% 31.8%
4mfzA02 3.40.630.120 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › 0.57 42.0 3.33e-01 97.2% 37.4%
1wb1A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 45.0 3.87e-01 87.3% 65.0%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.57 42.0 3.29e-01 78.9% 46.4%
3mgdB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 48.0 3.77e-01 94.4% 45.4%
1dleB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 45.0 3.63e-01 88.7% 62.0%
4dk0A02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.56 44.0 4.14e-01 97.2% 68.9%
1tkjA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.56 42.0 2.87e-01 83.1% 35.7%
4r3aA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 42.0 3.15e-01 80.3% 77.8%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 46.0 3.85e-01 98.6% 83.5%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 47.0 3.69e-01 100.0% 44.6%
1ckmA01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.54 41.0 3.25e-01 84.5% 62.6%
5ixgA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.54 45.0 3.54e-01 98.6% 95.8%
2jbwA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 45.0 3.17e-01 98.6% 35.9%
6l4lA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.53 46.0 3.77e-01 97.2% 65.4%
4l8jA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.53 42.0 3.87e-01 95.8% 66.3%
4fkeA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.53 43.0 3.14e-01 93.0% 94.5%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.53 44.0 4.07e-01 95.8% 83.2%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.52 42.0 3.08e-01 91.5% 92.7%
3aihB01 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.52 39.0 3.46e-01 81.7% 100.0%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.52 41.0 3.51e-01 90.1% 95.9%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 3.59e-01 98.6% 87.2%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.51 42.0 3.25e-01 95.8% 72.9%
2fivA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.50 38.0 3.36e-01 88.7% 54.0%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4335575 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 57.0 3.18e-01 91.5% 55.7%
3454410 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.65 46.0 3.45e-01 73.2% 55.6%
3484366 284.1.2.1 ↗ a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C 0.65 53.0 4.71e-01 93.0% 63.0%
3935930 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.64 48.0 3.37e-01 78.9% 55.3%
3319712 883.1.1.6 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N 0.63 55.0 4.43e-01 100.0% 51.0%
3404964 221.13.1.0 ↗ a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.63 42.0 3.54e-01 73.2% 41.7%
4223490 304.102.1.7 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.63 52.0 3.68e-01 91.5% 29.8%
4029724 883.1.1.6 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N 0.62 53.0 4.27e-01 100.0% 51.0%
4982570 3604.1.1.1 ↗ a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.59 47.0 4.74e-01 90.1% 90.0%
4964555 3604.1.1.1 ↗ a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.58 45.0 4.63e-01 93.0% 93.8%
3483430 60.1.2.0 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain 0.57 48.0 3.22e-01 95.8% 54.6%
3476468 60.1.2.2 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C 0.57 48.0 3.21e-01 95.8% 53.7%
3871082 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.57 39.0 3.07e-01 71.8% 53.3%
3509864 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.57 40.0 3.28e-01 73.2% 65.6%
3702149 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 46.0 3.59e-01 91.5% 44.4%
3898198 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.55 48.0 3.94e-01 94.4% 96.8%
3334359 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.55 48.0 3.55e-01 95.8% 86.7%
4342567 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.55 47.0 4.09e-01 98.6% 82.6%
5032539 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 41.0 4.22e-01 80.3% 100.0%
4260084 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.55 37.0 3.19e-01 70.4% 46.7%
3635930 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.54 38.0 2.89e-01 73.2% 34.2%
4262943 220.1.1.184 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP 0.53 45.0 3.75e-01 94.4% 96.0%
3289119 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 43.0 2.73e-01 97.2% 17.1%
3927710 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 36.0 2.77e-01 71.8% 51.5%
5029482 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.51 35.0 3.44e-01 71.8% 88.7%
3715739 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.51 44.0 2.75e-01 100.0% 23.2%
3217597 109.6.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N 0.50 41.0 2.52e-01 90.1% 81.1%