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KU708005.1__AMW64571.1__AH14b_p16__00016

Bact-Vir

KU708005.1__AMW64571.1__AH14b_p16__00016

Identity

Accession:
KU708005 ↗
Kingdom:
phage

Quality

89.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 482-593
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ewfA01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 43.0 3.33e-01 100.0% 31.6%
1rz4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 35.0 3.83e-01 98.2% 70.7%
7qqjB01 3.90.400.10 Alpha Beta › Alpha-Beta Complex › Oligo-1,6-glucosidase; domain 2 › Oligo-1,6-glucosidase; Domain 2 0.53 31.0 3.63e-01 75.9% 88.7%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 23.0 3.00e-01 83.9% 73.8%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3510016 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 80.0 8.08e-01 97.3% 100.0%
3981665 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 80.0 8.11e-01 98.2% 100.0%
1883335 101.1.2.174 alpha arrays › HTH › HTH › winged helix domain › HTH_56 0.77 62.0 6.47e-01 99.1% 92.3%
3505855 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.68 44.0 5.08e-01 89.3% 92.5%
3944712 101.1.9.40 alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N 0.66 41.0 4.30e-01 88.4% 67.6%
4951345 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 43.0 4.41e-01 94.6% 71.8%
4999991 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 43.0 4.34e-01 94.6% 68.7%
3181300 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.62e-01 98.2% 57.1%
5029251 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.56 38.0 4.22e-01 96.4% 92.9%
3622943 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.52 31.0 3.61e-01 82.1% 86.7%
4504577 65.1.1.8 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › EF_0837-like_N 0.51 38.0 2.83e-01 79.5% 81.3%
D2 medium residues 8-74
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qcpA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 48.0 3.58e-01 88.1% 62.6%
2vmhA00 2.60.120.1060 Mainly Beta › Sandwich › Jelly Rolls › NPCBM/NEW2 domain 0.57 39.0 3.16e-01 74.6% 94.6%
2yn0A00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.56 44.0 3.16e-01 92.5% 39.9%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 44.0 3.76e-01 92.5% 53.6%
2w1rA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 41.0 3.48e-01 86.6% 48.7%
7pikC01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 34.0 2.47e-01 79.1% 21.3%
1v8qA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 41.0 4.12e-01 86.6% 95.5%
4ifdG01 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 36.0 3.72e-01 74.6% 95.1%
1yqyA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.50 42.0 3.12e-01 100.0% 89.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3704178 5.1.4.47 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N 0.55 46.0 2.88e-01 92.5% 23.6%
3707076 511.1.1.0 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.54 43.0 3.37e-01 92.5% 56.3%
3218241 3940.1.1.1 a+b two layers › Spliceosomal helicase Aquarius insert domain › Spliceosomal helicase Aquarius insert domain › Spliceosomal helicase Aquarius insert domain › Aquarius_N_3rd 0.53 38.0 3.71e-01 79.1% 90.7%
3824898 314.1.1.2 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b 0.52 38.0 2.83e-01 79.1% 90.0%
3241120 64.3.1.4 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › Tmp39 0.51 36.0 3.70e-01 98.5% 78.5%
4403935 7527.1.1.1 a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE 0.51 40.0 2.87e-01 91.0% 63.0%
D3 medium residues 75-190
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06048.18 best DUF927 54.7 1.80e-14 98.3% 38.0%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 32.0 3.51e-01 100.0% 66.0%
3f02B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 33.0 3.56e-01 84.5% 73.0%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 29.0 3.36e-01 94.8% 74.4%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 42.0 3.93e-01 87.9% 90.6%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 27.0 3.05e-01 98.3% 65.9%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 34.0 3.44e-01 95.7% 68.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3975472 1104.1.1.1 a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.92 89.0 7.85e-01 100.0% 78.1%
3948387 1104.1.1.1 a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.85 81.0 7.31e-01 100.0% 78.7%
3838288 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 34.0 3.43e-01 100.0% 53.9%
3952420 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.51 39.0 3.09e-01 83.6% 92.5%
5052285 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 34.0 3.55e-01 88.8% 76.2%
D4 medium residues 191-357_377-394
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06048.18 best DUF927 137.4 1.10e-39 73.5% 44.7%
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1in4A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 50.0 5.57e-01 84.3% 89.9%
5vjhB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 59.0 5.59e-01 87.6% 93.0%
1g41A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 56.0 5.51e-01 85.9% 93.3%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 51.0 5.57e-01 87.6% 96.0%
3ja8204 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 63.0 5.04e-01 100.0% 70.8%
4r7zA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 60.0 4.99e-01 97.3% 72.2%
1htwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 45.0 4.88e-01 88.1% 81.0%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 49.0 5.38e-01 81.6% 94.6%
1tueD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 60.0 5.88e-01 100.0% 90.6%
2bjvA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 52.0 5.60e-01 84.3% 96.9%
3n70A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 47.0 5.26e-01 85.4% 95.1%
4zpxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 54.0 4.99e-01 87.0% 89.7%
5m7oA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 51.0 5.32e-01 82.2% 89.3%
1g8pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 54.0 5.29e-01 89.2% 97.5%
5e7pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 54.0 5.56e-01 90.3% 96.0%
4akgA12 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 40.0 4.81e-01 75.1% 98.3%
2c9oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 5.25e-01 93.0% 95.0%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 51.0 4.97e-01 87.0% 100.0%
7tjhE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 47.0 4.85e-01 80.0% 97.8%
2qgzA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 52.0 5.34e-01 90.3% 94.4%
4xjxA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 48.0 4.75e-01 84.3% 96.9%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 51.0 5.08e-01 91.4% 97.9%
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 49.0 4.57e-01 89.2% 86.1%
3upuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 48.0 4.90e-01 86.5% 100.0%
2ht1A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 46.0 4.35e-01 85.4% 89.3%
2o0jA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 48.0 4.33e-01 89.7% 85.0%
6x50A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 47.0 4.56e-01 88.1% 88.6%
1pjrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 46.0 4.53e-01 87.0% 96.0%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 46.0 4.35e-01 88.1% 95.5%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 48.0 4.62e-01 91.9% 97.6%
5k8bA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 35.0 3.18e-01 80.0% 46.2%
2p6rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 4.55e-01 91.4% 100.0%
2gruA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 38.0 3.98e-01 73.0% 99.4%
3huuC02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 34.0 3.84e-01 81.6% 87.2%
3h5oA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 35.0 3.91e-01 80.0% 86.1%
4b3fX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 43.0 3.60e-01 88.1% 77.5%
2xgjB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 38.0 3.70e-01 74.6% 87.9%
4kxfL01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 4.29e-01 90.3% 90.4%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 36.0 3.89e-01 71.4% 95.0%
1ihuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 3.96e-01 90.3% 98.4%
6z0pB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 4.03e-01 90.8% 71.8%
1gm5A04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 4.30e-01 90.8% 97.0%
5eswB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 34.0 3.39e-01 80.0% 64.6%
3qkiB01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 45.0 3.55e-01 95.1% 98.9%
3i3wA01 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.51 30.0 3.31e-01 81.6% 70.9%
4xqkB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 3.75e-01 82.2% 95.5%
3kkeA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 35.0 3.81e-01 80.0% 86.6%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3975473 2004.1.1.136 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.97 95.0 7.84e-01 99.5% 70.0%
3944606 2004.1.1.136 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.95 92.0 7.65e-01 98.9% 69.8%
5018481 2004.1.1.136 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.89 85.0 7.15e-01 98.9% 66.3%
1883334 2004.1.1.136 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.83 80.0 6.83e-01 98.9% 68.1%
4926850 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.74 57.0 6.20e-01 89.7% 94.8%
4931926 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 69.0 5.71e-01 100.0% 70.5%
4078827 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.73 66.0 5.50e-01 95.1% 74.7%
3390911 138.1.1.13 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › AAA 0.72 58.0 4.70e-01 84.3% 53.7%
None 0.71 55.0 5.78e-01 84.3% 87.6%
None 0.71 56.0 5.95e-01 84.9% 93.8%
None 0.71 55.0 5.90e-01 84.3% 93.1%
3695173 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.71 67.0 5.58e-01 100.0% 95.0%
None 0.71 55.0 5.90e-01 84.3% 93.1%
4134156 2004.1.1.125 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N 0.71 55.0 5.94e-01 84.9% 93.8%
3481498 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.70 65.0 5.53e-01 97.3% 89.8%
3703312 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 64.0 4.95e-01 97.3% 60.0%
5012900 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.70 66.0 5.99e-01 99.5% 99.6%
None 0.70 65.0 5.14e-01 97.3% 68.0%
None 0.70 55.0 5.74e-01 84.9% 88.2%
5025359 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.70 66.0 5.69e-01 100.0% 95.6%
4013468 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 65.0 5.56e-01 97.3% 97.8%
3611910 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.70 65.0 5.66e-01 100.0% 94.9%
3291643 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.70 61.0 5.65e-01 92.4% 95.2%
4030223 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.70 64.0 5.57e-01 97.3% 93.3%
3594982 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.70 65.0 5.78e-01 100.0% 99.6%
5003899 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.69 65.0 5.61e-01 100.0% 93.9%
4017535 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.69 65.0 5.38e-01 100.0% 94.9%
3465917 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 65.0 4.72e-01 100.0% 60.2%
None 0.69 65.0 4.70e-01 100.0% 61.2%
None 0.69 65.0 4.78e-01 100.0% 59.1%
None 0.69 65.0 4.93e-01 100.0% 70.5%
5064031 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 64.0 5.27e-01 100.0% 60.6%
3677397 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 65.0 4.65e-01 100.0% 57.5%
3550992 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.69 65.0 5.68e-01 100.0% 94.0%
None 0.69 63.0 4.90e-01 97.3% 67.0%
3255516 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.69 65.0 5.52e-01 100.0% 95.8%
3476274 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.69 64.0 5.57e-01 99.5% 96.0%
None 0.69 54.0 5.39e-01 84.9% 78.9%
None 0.68 64.0 5.08e-01 100.0% 76.1%
None 0.66 55.0 5.59e-01 88.1% 88.9%
5048100 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.66 59.0 5.26e-01 95.1% 90.2%
3610966 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 59.0 5.11e-01 95.7% 91.1%
3968271 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.66 59.0 5.66e-01 95.7% 92.9%
4069782 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 57.0 5.00e-01 91.9% 66.0%
4971317 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.65 53.0 5.09e-01 85.9% 92.6%
4351475 2004.1.1.624 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase, AAA_5 0.65 60.0 5.29e-01 99.5% 88.7%
2810781 8001.1.1.1 alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › PPV_E1_C 0.65 60.0 5.60e-01 100.0% 82.4%
4314819 2004.1.1.58 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase 0.65 58.0 5.76e-01 98.4% 91.8%
3972150 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.64 54.0 4.91e-01 90.3% 91.2%
4224436 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 51.0 4.56e-01 84.3% 98.8%
3954129 2004.1.1.58 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase 0.64 58.0 5.25e-01 97.3% 89.4%
3387909 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.63 59.0 5.27e-01 99.5% 84.7%
5023501 2004.1.1.58 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase 0.63 55.0 4.86e-01 92.4% 100.0%
4961851 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.63 51.0 5.26e-01 84.3% 92.6%
3839782 2004.1.1.58 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase 0.63 59.0 5.19e-01 100.0% 91.2%
1312358 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.63 46.0 4.99e-01 87.6% 91.4%
None 0.62 53.0 5.13e-01 90.3% 81.9%
4552869 2004.1.1.2 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 53.0 5.03e-01 90.3% 84.1%
4027191 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.62 53.0 4.79e-01 90.3% 80.0%
4941655 2004.1.1.129 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Zot 0.62 53.0 5.36e-01 90.3% 100.0%
3537109 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.61 53.0 4.76e-01 90.3% 72.2%
None 0.61 52.0 4.90e-01 90.3% 83.6%
3059318 2004.1.1.205 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_30 0.61 52.0 5.10e-01 89.7% 100.0%
5034518 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.61 57.0 5.39e-01 100.0% 91.6%
None 0.61 50.0 4.29e-01 87.6% 79.7%
4957061 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.60 53.0 5.02e-01 93.0% 92.3%
4974760 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 53.0 5.22e-01 93.5% 98.5%
None 0.60 51.0 4.90e-01 88.1% 86.8%
3665750 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.60 54.0 4.36e-01 97.3% 61.4%
3309065 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.60 50.0 3.95e-01 87.6% 68.2%
4045588 2004.1.1.507 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, Helicase_C, RecG_dom3_C 0.59 48.0 3.45e-01 84.9% 75.7%
3682710 2004.1.1.529 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 0.59 49.0 3.64e-01 88.1% 72.3%
4048177 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.59 52.0 4.74e-01 94.1% 75.9%
3678300 2004.1.1.529 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 0.58 48.0 3.77e-01 87.6% 62.6%
5006201 2004.1.1.220 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 0.57 47.0 4.44e-01 87.6% 98.7%
5078041 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.57 44.0 4.37e-01 81.6% 92.0%
4968086 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 47.0 3.98e-01 86.5% 80.0%
3682625 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 48.0 3.42e-01 89.7% 41.8%
3703321 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.56 48.0 3.99e-01 91.9% 90.0%
4940101 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.56 46.0 4.39e-01 87.6% 89.5%
3475069 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.56 46.0 3.85e-01 87.6% 71.4%
3936409 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 45.0 4.16e-01 86.5% 74.2%
4944452 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.55 46.0 3.89e-01 87.6% 91.7%
3724988 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.55 45.0 3.54e-01 85.9% 74.9%
4953333 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.54 46.0 4.58e-01 89.7% 98.4%
3690329 2004.1.1.473 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII, AAA_11 0.54 45.0 3.58e-01 88.1% 79.5%
3940067 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 45.0 3.76e-01 91.9% 82.8%
3677540 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.53 44.0 3.63e-01 89.7% 75.8%
3878696 2004.1.1.149 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SecA_DEAD 0.52 44.0 3.10e-01 91.4% 51.4%
2723546 2004.1.1.206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.51 44.0 4.05e-01 93.0% 81.4%
D5 medium residues 358-376_395-478
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oxfA05 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 28.0 3.28e-01 97.1% 58.7%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 40.0 3.90e-01 71.8% 65.2%
5c4yA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 40.0 3.68e-01 72.8% 61.8%
3oqlC00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.56 39.0 3.01e-01 72.8% 97.5%
7xcnM01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.53 37.0 4.16e-01 96.1% 94.9%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.50 39.0 3.97e-01 81.6% 93.0%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3975473 2004.1.1.136 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.93 88.0 6.10e-01 99.0% 43.1%
4210199 5045.1.1.1 alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A 0.73 56.0 4.47e-01 81.6% 85.9%
1883334 2004.1.1.136 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.72 65.0 4.78e-01 100.0% 41.1%
3279933 191.1.1.0 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.70 49.0 4.38e-01 72.8% 64.6%
3290489 191.1.1.0 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.66 46.0 4.43e-01 70.9% 70.4%
4933045 601.7.1.3 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › PaREP1 0.58 34.0 3.72e-01 98.1% 70.6%
4362754 5086.1.1.86 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YBHG 0.58 31.0 3.03e-01 100.0% 44.2%
3251657 142.1.1.5 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI 0.58 39.0 4.34e-01 70.9% 97.5%
3500877 7060.1.1.1 alpha arrays › ELMO domain › ELMO domain › ELMO domain › ELMO_CED12 0.57 43.0 3.58e-01 80.6% 80.0%
4965872 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.56 37.0 3.76e-01 76.7% 68.0%
4968618 611.6.1.0 alpha bundles › N-cbl like › PT26-6P helical domain › PT26-6P helical domain 0.56 38.0 3.94e-01 70.9% 91.8%
3933315 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.55 32.0 3.33e-01 96.1% 59.0%
3193925 2004.1.1.559 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_membrane 0.53 38.0 2.20e-01 75.7% 55.0%