←Back to structures
KU726251.1__AMR59737.1__SEGD1_088__00086
Bact-VirKU726251.1__AMR59737.1__SEGD1_088__00086
Identity
- Accession:
- KU726251 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Seoulvirus›
Enterobacteria_phage_SEGD1
TaxID: 1805456
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-58
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23838.2 best | DUF7208 | 56.8 | 2.50e-15 | 100.0% | 19.1% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 44.0 | 3.01e-01 | 70.7% | 74.0% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.56 | 35.0 | 2.87e-01 | 100.0% | 31.9% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 44.0 | 3.02e-01 | 96.6% | 86.2% |
| 2vw9B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 3.42e-01 | 87.9% | 88.6% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.52 | 42.0 | 2.92e-01 | 98.3% | 90.6% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.51 | 39.0 | 2.68e-01 | 81.0% | 60.8% |
| 3ua0A00 | 6.20.280.10 | Special › Other non-globular › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.50 | 31.0 | 2.84e-01 | 98.3% | 44.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.55 | 37.0 | 2.29e-01 | 70.7% | 71.8% | |
| 4635225 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.52 | 41.0 | 2.86e-01 | 96.6% | 87.3% |
| 3473720 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.52 | 42.0 | 3.43e-01 | 89.7% | 81.8% |
| 4028589 | 59.1.1.7 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Tau95_N | 0.52 | 40.0 | 3.36e-01 | 87.9% | 80.0% |
| 1943 | 11.13.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › Leukocidin | 0.51 | 34.0 | 2.25e-01 | 70.7% | 47.8% |
| 4283893 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.50 | 40.0 | 2.81e-01 | 100.0% | 77.1% |