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KU760857.1__AMR59979.1__J46_0061__00061

Bact-Vir

KU760857.1__AMR59979.1__J46_0061__00061

Identity

Accession:
KU760857 ↗
Kingdom:
phage

Quality

86.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-74
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00239.27 best Resolvase 54.9 1.40e-14 100.0% 43.1%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fx5A03 1.20.120.1690 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.75 40.0 3.46e-01 76.1% 35.0%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.65 56.0 4.54e-01 92.5% 80.2%
1d0xA04 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.63 59.0 4.54e-01 100.0% 65.0%
6mgiA03 1.20.1440.90 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Phosphoenolpyruvate/pyruvate domain 0.62 48.0 3.77e-01 89.6% 40.1%
1e1dA02 1.20.1270.20 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.60 52.0 4.83e-01 94.0% 85.7%
1l0wA03 3.30.1360.30 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › GAD-like domain 0.60 45.0 3.53e-01 80.6% 85.5%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 3.70e-01 86.6% 61.7%
4byfC01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.59 41.0 3.75e-01 73.1% 79.8%
3axsA02 3.30.56.70 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › N2,N2-dimethylguanosine tRNA methyltransferase, C-terminal domain 0.54 38.0 3.86e-01 79.1% 75.4%
1pc6A00 1.10.3790.10 Mainly Alpha › Orthogonal Bundle › NinB fold › NinB 0.54 39.0 3.10e-01 77.6% 52.5%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.58e-01 91.0% 69.0%
6n10A01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.51 38.0 2.67e-01 79.1% 45.1%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3416265 603.1.1.104 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 0.87 59.0 3.55e-01 70.1% 12.8%
3712975 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.85 58.0 3.78e-01 97.0% 18.4%
4929363 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.73 60.0 4.95e-01 100.0% 51.3%
3407025 603.2.1.0 alpha bundles › STAT-like › STAT › STAT 0.70 56.0 3.49e-01 85.1% 59.1%
3707907 320.4.1.3 a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB 0.68 57.0 4.78e-01 92.5% 86.1%
4335143 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.67 45.0 4.01e-01 82.1% 49.5%
5041715 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.67 60.0 5.08e-01 100.0% 75.5%
3410018 603.1.1.104 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 0.66 60.0 3.71e-01 100.0% 18.1%
3408042 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.64 59.0 3.60e-01 100.0% 46.1%
3274487 605.1.1.155 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Gpi1 0.64 55.0 4.03e-01 100.0% 36.0%
4182104 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.63 49.0 4.29e-01 82.1% 88.4%
3862747 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 46.0 4.29e-01 94.0% 62.4%
3372756 3826.1.1.64 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › LUC7 0.61 53.0 3.71e-01 95.5% 77.6%
3955729 150.8.1.7 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PF29644 0.61 56.0 4.12e-01 100.0% 40.6%
3497542 626.1.1.1 alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 0.60 54.0 3.32e-01 100.0% 18.2%
3517171 604.8.1.3 alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo › Gpi1 0.59 54.0 3.73e-01 100.0% 38.1%
3219908 109.4.1.80 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3 0.59 42.0 3.08e-01 74.6% 48.2%
3717340 605.1.1.155 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Gpi1 0.59 52.0 3.71e-01 100.0% 39.5%
3965485 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.58 51.0 2.93e-01 100.0% 67.4%
3929962 3877.1.1.0 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.58 48.0 3.38e-01 98.5% 45.5%
3212403 3877.1.1.1 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP 0.58 49.0 3.38e-01 98.5% 46.7%
3782917 109.4.1.1289 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30856 0.57 51.0 3.13e-01 98.5% 23.0%
3893901 3826.1.1.56 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › TRIP4_3rd 0.57 35.0 3.50e-01 100.0% 58.6%
3260933 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 48.0 3.25e-01 92.5% 86.5%
3635898 4120.1.1.66 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › PF26200 0.56 41.0 3.67e-01 79.1% 90.5%
3716937 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.54 31.0 2.97e-01 92.5% 52.0%
4024189 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.54 39.0 3.38e-01 92.5% 48.2%
3788383 316.1.1.14 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD 0.51 42.0 2.60e-01 94.0% 100.0%
3218561 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.50 42.0 3.00e-01 95.5% 96.3%
D2 medium residues 86-122
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02796.22 best HTH_7 42.7 6.70e-11 100.0% 77.8%
CATH (92)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.90 78.0 5.78e-01 100.0% 40.4%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.90 79.0 6.92e-01 100.0% 67.3%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 79.0 6.51e-01 100.0% 56.1%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 75.0 6.29e-01 100.0% 56.1%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 75.0 6.67e-01 100.0% 68.5%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 73.0 6.47e-01 100.0% 66.1%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 74.0 6.71e-01 100.0% 73.1%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.86 73.0 5.23e-01 100.0% 33.9%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 72.0 6.16e-01 100.0% 60.3%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 74.0 6.15e-01 100.0% 58.5%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 73.0 6.54e-01 100.0% 70.4%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 72.0 6.87e-01 100.0% 84.4%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 71.0 6.25e-01 100.0% 64.3%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 71.0 5.64e-01 100.0% 47.5%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 72.0 6.28e-01 100.0% 63.8%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 70.0 6.42e-01 100.0% 74.5%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 70.0 6.04e-01 100.0% 60.3%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 71.0 5.92e-01 100.0% 55.2%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 71.0 5.59e-01 100.0% 46.3%
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 65.0 6.63e-01 94.6% 100.0%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 6.00e-01 100.0% 62.3%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.82 69.0 4.30e-01 100.0% 18.0%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 5.87e-01 100.0% 59.4%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 67.0 6.20e-01 100.0% 72.9%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 5.61e-01 100.0% 49.3%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 5.66e-01 100.0% 51.4%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.81 70.0 6.17e-01 100.0% 69.6%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 5.48e-01 100.0% 51.4%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 66.0 6.48e-01 100.0% 95.1%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.05e-01 100.0% 39.3%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.80 66.0 5.54e-01 100.0% 55.9%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.84e-01 100.0% 61.7%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 66.0 6.04e-01 94.6% 74.0%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.79 65.0 4.88e-01 100.0% 37.6%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.79 65.0 4.56e-01 100.0% 29.4%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.49e-01 100.0% 57.1%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.44e-01 100.0% 55.2%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.78 67.0 4.41e-01 100.0% 54.2%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 6.12e-01 100.0% 75.5%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.78 66.0 4.97e-01 100.0% 87.2%
2k9qA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 58.0 5.68e-01 81.1% 80.0%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 64.0 5.15e-01 91.9% 48.6%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 5.07e-01 100.0% 41.1%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 5.98e-01 100.0% 75.0%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 5.01e-01 100.0% 42.5%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.77 66.0 4.55e-01 100.0% 30.5%
1fc3B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 4.76e-01 100.0% 49.5%
2hinA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 61.0 5.03e-01 89.2% 50.0%
2ijlB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 4.69e-01 100.0% 33.9%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 61.0 4.68e-01 89.2% 42.7%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.70e-01 100.0% 70.9%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 60.0 5.84e-01 100.0% 88.6%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 61.0 4.60e-01 100.0% 84.5%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 4.86e-01 100.0% 42.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.59e-01 100.0% 72.2%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 4.90e-01 100.0% 48.7%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 63.0 5.89e-01 100.0% 85.1%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 6.02e-01 100.0% 92.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.09e-01 100.0% 58.3%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 4.76e-01 100.0% 41.6%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.29e-01 100.0% 60.3%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 4.65e-01 100.0% 37.4%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.24e-01 100.0% 33.3%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 58.0 4.42e-01 91.9% 39.6%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 62.0 4.98e-01 100.0% 51.3%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 59.0 4.60e-01 89.2% 48.7%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.23e-01 100.0% 62.9%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.12e-01 100.0% 58.2%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 4.62e-01 100.0% 40.9%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 61.0 5.14e-01 100.0% 60.0%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 57.0 4.58e-01 91.9% 49.3%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.32e-01 100.0% 75.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.49e-01 100.0% 76.0%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 4.19e-01 100.0% 31.0%
2yveB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.71 58.0 3.83e-01 100.0% 32.0%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 60.0 4.41e-01 100.0% 40.4%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.89e-01 100.0% 56.1%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.96e-01 100.0% 62.5%
2oi8A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 54.0 3.51e-01 100.0% 27.1%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 58.0 3.75e-01 97.3% 24.7%
3cjdA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 58.0 3.71e-01 97.3% 24.2%
2rasA01 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 60.0 3.74e-01 97.3% 22.5%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.69e-01 100.0% 68.2%
2x26A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.66 54.0 3.52e-01 97.3% 73.0%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 3.80e-01 100.0% 33.6%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.26e-01 100.0% 45.1%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 4.42e-01 100.0% 62.5%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 51.0 4.61e-01 100.0% 63.9%
3on4D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 51.0 3.38e-01 97.3% 23.2%
5wxuD01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 52.0 3.19e-01 100.0% 58.1%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.55 44.0 3.82e-01 100.0% 73.1%
2imfA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 41.0 2.73e-01 97.3% 55.7%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.99 92.0 7.87e-01 100.0% 67.3%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.98 90.0 8.02e-01 100.0% 74.0%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.98 90.0 7.26e-01 100.0% 56.9%
4976345 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.98 90.0 7.46e-01 100.0% 61.7%
3409145 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.97 89.0 7.96e-01 100.0% 74.0%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.97 89.0 7.67e-01 100.0% 67.3%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.97 88.0 7.36e-01 100.0% 61.7%
4510105 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 86.0 8.36e-01 97.3% 90.0%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 87.0 7.26e-01 100.0% 63.3%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.96 87.0 6.33e-01 100.0% 41.1%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 87.0 7.48e-01 100.0% 67.3%
4385054 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 85.0 8.26e-01 97.3% 90.0%
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 88.0 7.31e-01 100.0% 61.7%
4961899 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.95 85.0 6.93e-01 100.0% 56.9%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.95 85.0 6.92e-01 100.0% 56.9%
5074939 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.95 81.0 7.03e-01 94.6% 63.6%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.94 83.0 7.82e-01 100.0% 82.2%
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 83.0 8.14e-01 100.0% 92.5%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.94 84.0 7.04e-01 100.0% 61.7%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 83.0 7.80e-01 100.0% 82.2%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 80.0 6.79e-01 97.3% 60.0%
4939690 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.93 83.0 5.92e-01 100.0% 37.0%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 82.0 7.72e-01 100.0% 82.2%
4957415 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.93 82.0 6.95e-01 100.0% 61.7%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 81.0 6.40e-01 100.0% 49.3%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.92 81.0 7.61e-01 100.0% 82.2%
5014141 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.92 80.0 7.31e-01 100.0% 74.0%
3281819 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.91 80.0 6.20e-01 100.0% 46.3%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.91 80.0 7.82e-01 100.0% 92.5%
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 80.0 7.84e-01 100.0% 92.5%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.91 79.0 7.48e-01 100.0% 82.2%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 79.0 6.94e-01 100.0% 67.3%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.90 79.0 7.43e-01 100.0% 82.2%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 79.0 6.33e-01 100.0% 52.1%
5028266 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 78.0 6.72e-01 100.0% 62.7%
4929382 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 77.0 6.83e-01 100.0% 67.3%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.89 77.0 7.61e-01 100.0% 92.5%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 80.0 6.72e-01 100.0% 65.0%
4963466 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.89 75.0 7.14e-01 100.0% 80.0%
4002905 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 77.0 6.40e-01 100.0% 56.9%
4994121 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 78.0 7.65e-01 100.0% 92.5%
5002577 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.89 76.0 5.30e-01 100.0% 30.8%
4946254 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 75.0 7.17e-01 100.0% 82.2%
5016985 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 76.0 7.22e-01 100.0% 82.2%
3283589 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.88 76.0 6.94e-01 100.0% 74.0%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.88 76.0 6.52e-01 100.0% 61.7%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.88 75.0 6.31e-01 100.0% 56.9%
4008046 101.1.1.348 alpha arrays › HTH › HTH › Three-helical HTH › PF30461 0.88 75.0 6.91e-01 100.0% 74.0%
5019249 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 73.0 5.62e-01 100.0% 42.4%
139963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 75.0 6.67e-01 100.0% 68.5%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.87 74.0 6.56e-01 100.0% 67.3%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 74.0 7.02e-01 100.0% 82.2%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.87 76.0 5.54e-01 100.0% 37.0%
3066183 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 73.0 5.30e-01 100.0% 35.2%
3988145 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.87 73.0 6.75e-01 100.0% 74.0%
5022370 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.87 75.0 5.81e-01 100.0% 45.0%
5017723 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 73.0 5.88e-01 100.0% 49.3%
1035813 101.1.6.2 alpha arrays › HTH › HTH › TrpR › HTH_7 0.87 73.0 6.63e-01 100.0% 71.2%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.87 76.0 6.48e-01 100.0% 75.0%
4985590 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.86 72.0 7.09e-01 97.3% 90.0%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.86 72.0 6.88e-01 100.0% 82.2%
4458444 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 72.0 5.41e-01 100.0% 38.9%
4973961 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 78.0 5.63e-01 100.0% 71.6%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.85 72.0 5.50e-01 100.0% 42.4%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 71.0 6.21e-01 100.0% 61.7%
3411416 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 71.0 6.81e-01 100.0% 84.1%
4952294 101.1.2.870 alpha arrays › HTH › HTH › winged helix domain › GerE 0.85 74.0 6.51e-01 100.0% 67.3%
3590885 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 72.0 5.93e-01 100.0% 67.1%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 72.0 5.81e-01 100.0% 49.3%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 70.0 6.11e-01 100.0% 61.7%
5030781 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 72.0 7.06e-01 100.0% 92.5%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.84 71.0 6.01e-01 100.0% 56.9%
3090474 4020.1.1.0 a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.84 71.0 4.83e-01 100.0% 26.8%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.84 72.0 5.21e-01 100.0% 35.2%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 70.0 6.47e-01 100.0% 74.0%
4034200 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.83 72.0 6.02e-01 100.0% 56.9%
3783362 2004.1.1.455 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 0.83 69.0 3.76e-01 100.0% 6.0%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 71.0 5.66e-01 100.0% 49.3%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 70.0 6.03e-01 100.0% 61.7%
4238039 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.82 68.0 5.95e-01 100.0% 61.7%
3942478 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 70.0 6.21e-01 100.0% 67.3%
3286659 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 70.0 5.76e-01 100.0% 52.9%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.82 66.0 6.62e-01 100.0% 97.4%
4007717 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 71.0 5.55e-01 100.0% 46.3%
4960928 101.1.3.16 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4 0.81 69.0 6.00e-01 100.0% 61.7%
5041148 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 69.0 5.68e-01 100.0% 52.9%
3287232 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 68.0 5.48e-01 100.0% 52.0%
3970951 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 65.0 6.07e-01 100.0% 72.0%
3980681 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 68.0 5.33e-01 100.0% 46.3%
1177545 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 64.0 5.38e-01 100.0% 52.9%
2759 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 64.0 5.44e-01 100.0% 55.4%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.78 64.0 4.90e-01 100.0% 40.0%
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.78 62.0 6.18e-01 100.0% 92.5%
3688231 5069.1.1.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.77 60.0 3.81e-01 89.2% 18.8%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 60.0 5.89e-01 100.0% 84.4%
3958970 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.77 65.0 5.14e-01 100.0% 47.5%
5014584 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.76 63.0 4.95e-01 100.0% 43.5%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 59.0 5.05e-01 100.0% 58.6%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.74 59.0 5.85e-01 100.0% 95.0%