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KU761558.1__AMS00950.1__SEA_LOSER_54__00053

Bact-Vir

KU761558.1__AMS00950.1__SEA_LOSER_54__00053

Identity

Accession:
KU761558 ↗
Kingdom:
phage

Quality

92.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Fromanvirus› Mycobacterium_phage_Loser

TaxID: 1815969

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-65
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26826.1 best Phage_gp51 114.1 3.00e-33 100.0% 91.0%
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 59.0 5.80e-01 100.0% 72.3%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 57.0 5.82e-01 98.4% 79.7%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 59.0 4.90e-01 100.0% 50.0%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 62.0 5.70e-01 100.0% 71.1%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 59.0 5.93e-01 100.0% 83.9%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 57.0 6.20e-01 100.0% 100.0%
3a46A01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.73 64.0 4.95e-01 100.0% 60.3%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.71 63.0 5.65e-01 100.0% 82.6%
4epcA01 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.70 63.0 5.71e-01 100.0% 81.5%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.69 63.0 5.30e-01 100.0% 65.7%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 5.52e-01 100.0% 80.6%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.66 51.0 5.34e-01 100.0% 90.9%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.66 49.0 4.96e-01 100.0% 81.7%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 49.0 4.70e-01 82.0% 80.0%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 54.0 5.40e-01 100.0% 89.1%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 4.17e-01 100.0% 39.1%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 5.17e-01 100.0% 80.8%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.63 56.0 4.37e-01 100.0% 47.0%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.63 57.0 4.25e-01 100.0% 52.4%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.61 54.0 5.15e-01 100.0% 93.0%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.59 41.0 4.00e-01 90.2% 66.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 50.0 4.87e-01 100.0% 86.6%
2ivdB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 3.53e-01 96.7% 51.2%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 2.94e-01 100.0% 42.0%
5cqfA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 46.0 2.87e-01 100.0% 42.0%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.56 40.0 3.68e-01 78.7% 59.5%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 45.0 2.78e-01 95.1% 35.5%
1vqwA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 2.92e-01 98.4% 48.1%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 3.91e-01 100.0% 73.0%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 3.08e-01 98.4% 58.5%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 36.0 2.48e-01 70.5% 65.4%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 38.0 3.92e-01 86.9% 79.3%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 3.90e-01 96.7% 71.8%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 43.0 4.34e-01 90.2% 86.9%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 2.74e-01 96.7% 15.9%
4yfbC01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 38.0 2.50e-01 78.7% 87.5%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 39.0 2.56e-01 82.0% 59.1%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 39.0 2.61e-01 83.6% 59.0%
1k4nA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 41.0 2.93e-01 86.9% 53.0%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.66e-01 96.7% 64.2%
4a9wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 40.0 2.65e-01 95.1% 78.2%
3mcaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 39.0 3.26e-01 88.5% 93.2%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 39.0 3.84e-01 88.5% 77.6%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 39.0 3.35e-01 96.7% 92.7%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.50 41.0 3.60e-01 95.1% 88.8%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027263 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.82 64.0 4.99e-01 100.0% 41.7%
4161673 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.80 60.0 5.30e-01 100.0% 56.5%
4629735 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 62.0 6.08e-01 100.0% 76.9%
3656401 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 61.0 5.71e-01 100.0% 66.7%
4300449 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.80 61.0 6.02e-01 100.0% 76.9%
5022848 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 61.0 6.20e-01 100.0% 83.3%
3905549 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 60.0 4.95e-01 100.0% 47.6%
3510786 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.78 60.0 5.92e-01 100.0% 76.9%
3570368 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 60.0 4.98e-01 100.0% 50.0%
5004050 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 53.0 5.09e-01 100.0% 64.3%
3742938 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.75 60.0 5.92e-01 100.0% 80.0%
3637508 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.74 58.0 5.69e-01 100.0% 78.5%
4063512 4.1.1.86 ↗ beta barrels › SH3 › SH3 › SH3 › GW 0.74 66.0 6.19e-01 100.0% 89.3%
3713334 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 61.0 6.19e-01 100.0% 90.0%
3511375 4.1.1.349 ↗ beta barrels › SH3 › SH3 › SH3 › ROF 0.73 55.0 4.97e-01 100.0% 58.8%
5032809 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.73 56.0 4.38e-01 100.0% 39.2%
145646 3504.2.1.1 ↗ beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco 0.73 64.0 4.99e-01 100.0% 61.7%
3730229 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.73 57.0 5.30e-01 100.0% 68.0%
4565130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 4.94e-01 100.0% 54.7%
3766659 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 56.0 5.68e-01 100.0% 83.3%
3699995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.45e-01 100.0% 74.3%
5032454 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.71 57.0 4.44e-01 100.0% 40.8%
4054649 4.1.1.86 ↗ beta barrels › SH3 › SH3 › SH3 › GW 0.71 64.0 5.96e-01 100.0% 93.3%
4565837 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.71 56.0 4.82e-01 100.0% 54.7%
4883261 4.1.1.76 ↗ beta barrels › SH3 › SH3 › SH3 › NdhO 0.71 64.0 5.49e-01 100.0% 74.7%
3972820 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.76e-01 100.0% 81.2%
3733191 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 65.0 3.90e-01 100.0% 17.1%
1120123 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 63.0 5.78e-01 100.0% 84.6%
1590306 4.1.1.86 ↗ beta barrels › SH3 › SH3 › SH3 › GW 0.70 61.0 5.69e-01 100.0% 89.7%
4932404 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.70 62.0 4.51e-01 100.0% 37.5%
5055039 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.70 61.0 4.61e-01 100.0% 42.1%
4213326 4.1.1.86 ↗ beta barrels › SH3 › SH3 › SH3 › GW 0.69 62.0 5.65e-01 100.0% 82.5%
3591144 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 59.0 4.37e-01 98.4% 38.0%
3602511 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 49.0 4.73e-01 100.0% 70.0%
3482360 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 62.0 5.35e-01 100.0% 77.8%
3707346 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 61.0 5.45e-01 100.0% 79.5%
165654 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.66 58.0 5.40e-01 100.0% 78.4%
3946297 4.1.1.111 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.65 49.0 4.71e-01 100.0% 71.4%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.46e-01 100.0% 87.5%
3812766 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 58.0 5.54e-01 100.0% 85.7%
4265943 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.64 54.0 3.45e-01 100.0% 19.3%
4422252 4.1.1.455 ↗ beta barrels › SH3 › SH3 › SH3 › DSRB 0.64 53.0 5.34e-01 100.0% 93.3%
3594413 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 58.0 5.26e-01 100.0% 77.5%
3932647 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 53.0 4.73e-01 100.0% 65.9%
4947612 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.63 56.0 4.30e-01 100.0% 45.0%
2978978 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 56.0 5.24e-01 100.0% 80.0%
5073807 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.63 56.0 4.38e-01 100.0% 51.5%
3251170 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 54.0 5.22e-01 100.0% 84.3%
4545520 4.7.1.7 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.63 55.0 4.98e-01 100.0% 71.8%
3953109 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.62 55.0 4.77e-01 100.0% 64.2%
3281618 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.62 54.0 4.63e-01 100.0% 71.0%
3724767 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.61 55.0 3.38e-01 100.0% 26.5%
4936051 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.74e-01 100.0% 90.9%
3706854 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.61 54.0 3.38e-01 100.0% 28.2%
4020992 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.61 54.0 3.37e-01 100.0% 25.8%
5063379 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.59 46.0 3.33e-01 85.2% 89.4%
4220608 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.59 47.0 4.39e-01 100.0% 70.7%
3168924 4.1.1.232 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 0.59 52.0 5.02e-01 100.0% 84.3%
3721364 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.59 49.0 4.00e-01 91.8% 87.0%
4014377 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 48.0 2.98e-01 96.7% 38.4%
None — 0.59 47.0 2.93e-01 96.7% 37.0%
4055974 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.58 49.0 3.99e-01 100.0% 49.6%
4936917 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.57 47.0 3.92e-01 100.0% 96.0%
4128898 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 46.0 3.46e-01 100.0% 95.4%
3492017 5.1.4.276 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_2nd 0.56 46.0 2.68e-01 96.7% 96.0%
3998766 3775.1.1.1 ↗ beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 0.56 43.0 2.71e-01 85.2% 45.9%
4988847 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 42.0 4.00e-01 96.7% 72.0%
1238016 5.1.4.20 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Glu_cyclase_2 0.53 46.0 3.07e-01 96.7% 26.9%
4381766 220.1.1.54 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_18 0.52 42.0 3.15e-01 93.4% 87.1%
4508428 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.52 43.0 3.83e-01 100.0% 64.2%
3212496 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 41.0 3.73e-01 91.8% 91.1%
3614205 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 43.0 3.40e-01 100.0% 64.3%