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KU862660.1__ANA49140.1__PMW_15__00015

Bact-Vir

KU862660.1__ANA49140.1__PMW_15__00015

Identity

Accession:
KU862660 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Plaisancevirus› Pseudomonas_phage_phiPMW

TaxID: 1815582

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-70
PDB
Domain cluster: rep: KU234533.1__AND75606.1__X__00030__D53-114
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 49.0 4.08e-01 70.0% 74.6%
2gr7A00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.67 58.0 5.22e-01 100.0% 100.0%
2pn5A10 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.63 43.0 3.38e-01 71.4% 67.8%
3ktnA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.61 43.0 2.78e-01 74.3% 34.1%
3bnvD00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 40.0 3.26e-01 71.4% 58.0%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.58 42.0 3.29e-01 75.7% 38.1%
3ilvA01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.58 40.0 2.74e-01 71.4% 49.0%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 42.0 3.16e-01 80.0% 80.2%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 39.0 3.30e-01 71.4% 42.3%
2lg7A00 2.60.60.50 Mainly Beta › Sandwich › Lipoxygenase-1 › 0.57 47.0 3.84e-01 91.4% 89.1%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4446877 2484.1.1.43 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.82 51.0 3.33e-01 70.0% 16.6%
4078209 7503.1.1.3 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.65 44.0 3.47e-01 70.0% 77.9%
3387200 7503.1.1.0 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.63 43.0 3.87e-01 70.0% 89.5%
5000149 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.36e-01 97.1% 77.6%
4263062 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.60 46.0 4.21e-01 81.4% 71.1%
3593358 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.59 40.0 2.69e-01 71.4% 74.3%
4009799 274.1.1.4 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI 0.55 44.0 3.93e-01 92.9% 65.7%
3963078 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.53 39.0 3.70e-01 78.6% 69.4%
5050503 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.53 42.0 2.56e-01 84.3% 50.5%
3177409 330.1.1.13 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Mgm101p 0.52 36.0 2.80e-01 71.4% 49.7%
4003150 1116.1.1.1 ↗ a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin_dom 0.52 44.0 3.30e-01 91.4% 93.3%
5002676 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.51 42.0 3.66e-01 94.3% 90.4%