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KU862660.1__ANA49205.1__PMW_80__00080
Bact-VirKU862660.1__ANA49205.1__PMW_80__00080
Identity
- Accession:
- KU862660 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Taxonomy
TaxID: 1815582
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-68
Domain cluster:
rep: MW419087.1__QQO41447.1__015DV004_232__00232__D3-68
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g5xA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.71 | 50.0 | 3.68e-01 | 73.5% | 50.6% |
| 1iftA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.69 | 48.0 | 3.54e-01 | 73.5% | 48.3% |
| 3mvgA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.68 | 48.0 | 3.64e-01 | 73.5% | 46.0% |
| 1nioA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.67 | 47.0 | 3.56e-01 | 73.5% | 48.8% |
| 2gwnA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.65 | 43.0 | 3.83e-01 | 80.9% | 48.0% |
| 4fbcA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.64 | 54.0 | 4.05e-01 | 94.1% | 92.0% |
| 2zbwA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 40.0 | 3.32e-01 | 73.5% | 36.6% |
| 3facA00 | 2.170.150.70 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › | 0.61 | 53.0 | 4.57e-01 | 97.1% | 99.1% |
| 5d61A01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.60 | 45.0 | 3.53e-01 | 82.4% | 82.5% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 44.0 | 2.95e-01 | 80.9% | 32.1% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 40.0 | 3.40e-01 | 70.6% | 59.6% |
| 3f8dA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 37.0 | 3.10e-01 | 73.5% | 35.0% |
| 5u81A01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.59 | 48.0 | 3.34e-01 | 94.1% | 51.0% |
| 2yzyA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 48.0 | 3.55e-01 | 88.2% | 74.2% |
| 2ogjA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.58 | 44.0 | 3.72e-01 | 82.4% | 57.4% |
| 3ohsX02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 43.0 | 3.14e-01 | 83.8% | 62.9% |
| 1aqzA00 | 3.10.450.30 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases | 0.56 | 43.0 | 3.52e-01 | 86.8% | 68.3% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.56 | 40.0 | 3.41e-01 | 76.5% | 64.6% |
| 2f2hA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 38.0 | 3.25e-01 | 70.6% | 64.2% |
| 1jlxA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 48.0 | 3.73e-01 | 100.0% | 78.6% |
| 5cz2C00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 38.0 | 3.04e-01 | 73.5% | 82.9% |
| 3lzwA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 39.0 | 3.31e-01 | 76.5% | 46.2% |
| 1ygaA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 44.0 | 2.85e-01 | 89.7% | 90.5% |
| 3itjA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 34.0 | 2.89e-01 | 72.1% | 34.9% |
| 6lf2B01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 47.0 | 3.90e-01 | 100.0% | 77.4% |
| 3vwcA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 46.0 | 3.68e-01 | 100.0% | 79.5% |
| 4iq0C02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 42.0 | 3.15e-01 | 89.7% | 54.7% |
| 1y9wA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 36.0 | 3.16e-01 | 70.6% | 78.8% |
| 7e52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 37.0 | 3.08e-01 | 76.5% | 46.9% |
| 2knqA01 | 3.55.40.10 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain | 0.52 | 35.0 | 2.90e-01 | 70.6% | 42.4% |
| 3e82E02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 42.0 | 3.10e-01 | 92.6% | 50.5% |
| 3v0aB04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 39.0 | 3.14e-01 | 85.3% | 78.2% |
| 4govA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 45.0 | 3.67e-01 | 100.0% | 77.1% |
| 1sqhA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 38.0 | 3.18e-01 | 83.8% | 59.5% |
| 5g56A03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 45.0 | 3.70e-01 | 100.0% | 82.3% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.50 | 43.0 | 3.24e-01 | 100.0% | 57.2% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3990887 | 375.1.1.89 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like | 0.79 | 56.0 | 6.11e-01 | 75.0% | 90.9% |
| 4960279 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.79 | 53.0 | 6.17e-01 | 70.6% | 98.0% |
| 5044773 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.65 | 43.0 | 4.82e-01 | 76.5% | 94.0% |
| 5030227 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.65 | 46.0 | 5.00e-01 | 76.5% | 92.7% |
| 4013994 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.63 | 51.0 | 4.33e-01 | 89.7% | 89.6% |
| 4358263 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.63 | 46.0 | 3.43e-01 | 77.9% | 56.6% |
| 5068435 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.63 | 43.0 | 4.60e-01 | 76.5% | 87.3% |
| 2389474 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.63 | 43.0 | 4.56e-01 | 76.5% | 83.1% |
| 3970700 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.62 | 55.0 | 4.39e-01 | 95.6% | 92.2% |
| 3968118 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.62 | 54.0 | 4.33e-01 | 95.6% | 85.4% |
| 4019090 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.62 | 55.0 | 4.27e-01 | 100.0% | 97.3% |
| 3734654 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.62 | 55.0 | 4.52e-01 | 100.0% | 98.4% |
| 3744188 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.61 | 56.0 | 4.41e-01 | 100.0% | 87.4% |
| 3697084 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.61 | 55.0 | 4.28e-01 | 97.1% | 92.8% |
| 5040976 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.61 | 50.0 | 3.61e-01 | 91.2% | 91.0% |
| 4995512 | 4294.1.1.2 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p | 0.61 | 43.0 | 4.57e-01 | 79.4% | 86.7% |
| 3721465 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.61 | 54.0 | 4.16e-01 | 98.5% | 78.0% |
| 3721570 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.61 | 54.0 | 4.60e-01 | 100.0% | 89.1% |
| 3691618 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.60 | 55.0 | 3.97e-01 | 100.0% | 87.6% |
| 4012530 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.60 | 55.0 | 3.73e-01 | 100.0% | 83.9% |
| 3188595 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.60 | 55.0 | 3.98e-01 | 100.0% | 85.0% |
| 4021359 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.60 | 53.0 | 3.78e-01 | 95.6% | 92.0% |
| 3727362 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.60 | 54.0 | 3.95e-01 | 100.0% | 85.1% |
| 3185281 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.59 | 52.0 | 4.16e-01 | 97.1% | 90.3% |
| 4016513 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.59 | 52.0 | 4.61e-01 | 98.5% | 100.0% |
| 3979951 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.58 | 47.0 | 3.87e-01 | 88.2% | 64.2% |
| 3733331 | 708.1.2.10 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 | 0.57 | 49.0 | 4.10e-01 | 92.6% | 80.0% |
| 3893868 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 33.0 | 2.89e-01 | 73.5% | 38.1% |
| 4053315 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.56 | 40.0 | 3.30e-01 | 76.5% | 44.8% |
| 3831652 | 71.1.1.17 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF28435 | 0.56 | 49.0 | 3.67e-01 | 95.6% | 81.0% |
| 3612730 | 10.15.1.1 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 | 0.56 | 42.0 | 3.58e-01 | 83.8% | 84.2% |
| 4071090 | 2003.1.2.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 | 0.55 | 39.0 | 3.15e-01 | 75.0% | 43.7% |
| 4157035 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.55 | 39.0 | 3.19e-01 | 76.5% | 41.5% |
| 5031305 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 36.0 | 3.71e-01 | 72.1% | 87.7% |
| 3954941 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.52 | 40.0 | 3.75e-01 | 86.8% | 80.0% |
| 3412380 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.52 | 39.0 | 2.66e-01 | 86.8% | 69.2% |