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KU862660.1__ANA49308.1__PMW_183__00183

Bact-Vir

KU862660.1__ANA49308.1__PMW_183__00183

Identity

Accession:
KU862660 ↗
Kingdom:
phage

Quality

96.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-64
PDB
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4r5qA00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.80 56.0 3.78e-01 73.0% 21.4%
2gk4A00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.70 57.0 3.79e-01 90.5% 24.0%
2rb7A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.68 54.0 3.60e-01 87.3% 98.4%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 41.0 3.92e-01 100.0% 53.3%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 41.0 3.68e-01 100.0% 46.0%
2x65A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.63 49.0 3.14e-01 87.3% 72.5%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.62 48.0 3.85e-01 87.3% 68.1%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 40.0 3.31e-01 88.9% 38.5%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 39.0 3.50e-01 100.0% 47.7%
4ehoB03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.61 50.0 3.79e-01 100.0% 57.5%
3ktcA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.60 48.0 3.02e-01 87.3% 86.7%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 3.89e-01 96.8% 53.1%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 38.0 3.45e-01 96.8% 45.6%
2znrA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.59 44.0 3.22e-01 81.0% 86.0%
1go4A00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.59 43.0 3.03e-01 77.8% 66.8%
3h1tA01 3.90.1570.30 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › 0.59 45.0 3.59e-01 88.9% 38.0%
4bgpA01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.58 47.0 3.82e-01 92.1% 52.0%
4s1hA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 49.0 3.26e-01 100.0% 46.7%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 32.0 2.75e-01 96.8% 31.3%
6liuC02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 42.0 3.45e-01 79.4% 86.2%
4nocD00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.57 44.0 3.55e-01 88.9% 59.3%
4r70B03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.57 46.0 3.71e-01 100.0% 53.7%
3awmA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.56 44.0 2.77e-01 88.9% 74.4%
1x4rA01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.56 41.0 3.86e-01 77.8% 69.6%
3vp7A00 1.10.418.40 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Autophagy protein 6/Beclin 1 0.56 48.0 3.54e-01 95.2% 77.7%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 35.0 3.12e-01 96.8% 42.6%
3zq5A03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.56 45.0 3.61e-01 100.0% 49.7%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.55 40.0 3.79e-01 96.8% 62.5%
4uhiA01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.55 42.0 2.59e-01 84.1% 76.6%
6qu3A02 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 42.0 3.15e-01 90.5% 37.5%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 34.0 2.68e-01 96.8% 27.9%
1mkyA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 46.0 3.52e-01 98.4% 95.5%
1eupA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.54 46.0 2.86e-01 100.0% 23.6%
1exbA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.53 47.0 2.98e-01 100.0% 27.9%
1a0gA02 3.20.10.10 Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 0.53 45.0 3.38e-01 95.2% 56.6%
4esyA00 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.53 41.0 3.15e-01 88.9% 52.1%
2pokA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 45.0 2.97e-01 100.0% 74.0%
3mdmA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 43.0 2.69e-01 100.0% 26.7%
1pfkA01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 45.0 3.26e-01 100.0% 82.5%
4y4qA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.51 38.0 2.89e-01 82.5% 89.1%
3o8oF01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 42.0 3.04e-01 100.0% 96.4%
3sfvB01 3.30.450.390 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 40.0 3.05e-01 84.1% 79.6%
7l5aA02 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.51 42.0 3.44e-01 100.0% 56.9%
4obuA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.51 44.0 3.00e-01 98.4% 42.7%
1hywA00 3.30.1580.10 Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W 0.50 35.0 3.63e-01 76.2% 82.8%
5o5cB02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 44.0 3.51e-01 98.4% 75.0%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 43.0 2.86e-01 98.4% 38.9%
2qmaA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 43.0 3.50e-01 98.4% 77.6%
2cy8A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 42.0 3.03e-01 95.2% 52.9%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1507122 2008.1.1.4 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 0.80 56.0 3.78e-01 73.0% 21.4%
5041715 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.71 51.0 4.25e-01 76.2% 43.6%
5081860 2003.1.1.51 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP 0.71 59.0 4.02e-01 95.2% 26.5%
4932057 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.67 39.0 3.61e-01 100.0% 45.0%
5035483 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.67 55.0 4.06e-01 90.5% 40.0%
4521593 286.1.1.1 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase 0.67 55.0 4.52e-01 93.7% 55.0%
3955679 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.66 41.0 3.67e-01 100.0% 44.4%
4563894 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.66 40.0 3.65e-01 100.0% 45.9%
4242672 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 45.0 3.21e-01 73.0% 26.0%
4941846 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.66 41.0 3.88e-01 100.0% 53.3%
5027863 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.65 40.0 3.67e-01 100.0% 48.8%
4174422 286.1.1.1 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase 0.64 55.0 4.44e-01 100.0% 51.5%
4566218 286.1.1.1 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase 0.64 50.0 4.10e-01 88.9% 49.6%
3225058 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.64 51.0 3.25e-01 88.9% 28.9%
5071736 2004.1.1.277 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HerA_C 0.63 45.0 2.75e-01 74.6% 13.4%
5064558 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.63 56.0 3.45e-01 100.0% 33.8%
3928777 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.62 50.0 4.19e-01 88.9% 84.5%
3387933 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.62 52.0 3.75e-01 100.0% 33.8%
3921414 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.61 41.0 3.84e-01 74.6% 55.7%
4098142 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.61 38.0 3.57e-01 100.0% 50.0%
2705 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.61 39.0 3.51e-01 100.0% 48.2%
5046131 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 3.66e-01 96.8% 47.0%
3723708 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 49.0 3.45e-01 88.9% 34.5%
3912708 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.59 40.0 3.93e-01 71.4% 71.4%
3980132 823.1.1.1 a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › gpW 0.59 42.0 4.37e-01 77.8% 87.3%
5021782 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.58 46.0 3.84e-01 88.9% 52.2%
3493963 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 39.0 3.31e-01 92.1% 44.0%
3880308 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.57 41.0 3.85e-01 77.8% 82.5%
3187156 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.56 46.0 2.76e-01 95.2% 70.2%
3482679 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.81e-01 81.0% 85.9%
4935223 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.56 44.0 3.52e-01 88.9% 43.7%
4979329 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.55 43.0 3.46e-01 88.9% 52.1%
3587766 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.55 47.0 2.90e-01 98.4% 54.8%
3221074 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.55 47.0 2.83e-01 98.4% 38.1%
3750883 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.55 37.0 2.65e-01 100.0% 24.6%
5016197 282.1.1.1 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS 0.55 42.0 3.67e-01 88.9% 51.8%
3966537 140.1.1.8 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 0.55 43.0 2.61e-01 88.9% 28.5%
3418919 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.54 46.0 2.99e-01 98.4% 23.7%
4926885 282.1.1.0 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.54 42.0 3.43e-01 88.9% 56.2%
3962316 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.54 41.0 3.37e-01 84.1% 70.8%
4196990 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.53 42.0 3.90e-01 88.9% 81.9%
5075184 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.53 44.0 3.14e-01 95.2% 84.3%
3678018 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 37.0 2.46e-01 87.3% 16.7%
4565985 5051.1.1.3 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF 0.53 46.0 2.75e-01 100.0% 53.6%
3164638 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.53 45.0 2.98e-01 95.2% 89.6%
5061619 1075.1.1.3 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_2 0.52 46.0 3.04e-01 100.0% 71.1%
4581803 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.52 46.0 3.29e-01 100.0% 86.7%
5082092 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.52 44.0 3.03e-01 95.2% 86.8%
4963553 2005.1.1.29 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g 0.51 41.0 2.69e-01 90.5% 76.3%
4940513 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.51 36.0 3.25e-01 76.2% 54.4%
4453177 4207.1.2.1 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med7 0.51 43.0 3.43e-01 93.7% 64.0%
4140374 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.50 40.0 3.69e-01 88.9% 89.4%
1152767 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.50 43.0 3.68e-01 98.4% 90.7%
4869676 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.50 42.0 2.85e-01 90.5% 63.6%