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KU873925.1__AND75102.1__pf16_179__00178

Bact-Vir

KU873925.1__AND75102.1__pf16_179__00178

Identity

Accession:
KU873925 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chakrabartyvirus› Pseudomonas_phage_pf16

TaxID: 1815630

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-99
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13744.13 best HTH_37 67.9 7.80e-19 79.8% 86.2%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.94 70.0 7.84e-01 78.7% 94.7%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 51.0 5.63e-01 72.3% 90.3%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 50.0 5.41e-01 70.2% 90.9%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 51.0 5.41e-01 74.5% 86.6%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 52.0 5.40e-01 75.5% 91.8%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 50.0 5.67e-01 74.5% 100.0%
1gvnA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.71 50.0 5.22e-01 73.4% 92.0%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 52.0 5.73e-01 81.9% 98.7%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 48.0 5.43e-01 74.5% 97.1%
2wusS00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 47.0 5.03e-01 70.2% 87.8%
7utzR02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.69 50.0 3.55e-01 75.5% 97.8%
2p5tA00 1.10.8.130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.69 49.0 5.03e-01 74.5% 89.1%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 47.0 4.78e-01 73.4% 74.4%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 51.0 5.34e-01 78.7% 97.6%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 47.0 4.84e-01 72.3% 85.4%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 47.0 5.09e-01 74.5% 90.8%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 46.0 5.22e-01 73.4% 100.0%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 48.0 4.91e-01 81.9% 97.8%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 43.0 4.62e-01 74.5% 97.4%
1yuzB01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 40.0 3.54e-01 73.4% 96.4%
3vz3A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.54 39.0 2.87e-01 76.6% 60.1%
7w5lA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.54 38.0 2.89e-01 75.5% 70.9%
3r2kA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 40.0 3.41e-01 78.7% 58.4%
7xk2R01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 44.0 3.16e-01 88.3% 67.2%
4gr2A00 1.10.1200.210 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX 0.53 47.0 4.54e-01 100.0% 97.3%
4f3xA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 39.0 2.85e-01 79.8% 49.1%
3r31A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 38.0 2.81e-01 77.7% 53.8%
4cmyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 38.0 3.19e-01 80.9% 60.1%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965368 101.1.4.20 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.96 74.0 8.08e-01 79.8% 93.8%
3977908 101.1.4.20 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.94 73.0 7.28e-01 79.8% 78.9%
3983992 101.1.4.20 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.92 71.0 7.72e-01 79.8% 95.0%
2791 101.1.4.20 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.88 72.0 7.38e-01 87.2% 89.9%
4264146 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 56.0 6.35e-01 72.3% 98.5%
4502581 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.78 53.0 6.09e-01 71.3% 100.0%
3287571 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 58.0 6.05e-01 79.8% 87.1%
3955282 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 57.0 6.20e-01 80.9% 97.3%
3587618 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.77 53.0 5.56e-01 71.3% 78.8%
2813240 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 51.0 5.63e-01 71.3% 90.3%
3954613 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 57.0 5.14e-01 79.8% 66.4%
3285035 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.75 58.0 5.99e-01 83.0% 86.7%
4968599 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.74 53.0 5.81e-01 74.5% 94.7%
3062945 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 52.0 5.80e-01 73.4% 95.8%
5036222 101.1.4.16 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.74 49.0 5.73e-01 73.4% 100.0%
None — 0.73 52.0 5.71e-01 75.5% 93.3%
5080375 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 56.0 5.70e-01 80.9% 85.6%
4605318 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 50.0 5.47e-01 72.3% 88.0%
5003294 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 49.0 5.42e-01 70.2% 90.7%
3059487 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 52.0 5.44e-01 76.6% 86.0%
3506728 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 53.0 4.81e-01 77.7% 100.0%
3280923 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.72 50.0 5.19e-01 71.3% 83.5%
5057975 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 50.0 5.43e-01 73.4% 90.7%
4367316 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 54.0 5.08e-01 80.9% 71.3%
3280985 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.71 50.0 5.15e-01 73.4% 83.3%
4950501 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.71 48.0 5.48e-01 72.3% 100.0%
4975718 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 51.0 5.58e-01 75.5% 94.7%
4984923 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 48.0 5.17e-01 71.3% 83.7%
3281537 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 53.0 5.51e-01 79.8% 88.2%
4033847 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 51.0 4.91e-01 76.6% 71.4%
3285904 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.69 53.0 5.30e-01 81.9% 80.0%
5030212 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 48.0 5.35e-01 72.3% 95.7%
2647253 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 46.0 5.00e-01 70.2% 83.3%
148652 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 48.0 4.93e-01 72.3% 77.5%
2775 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.69 54.0 5.71e-01 84.0% 98.8%
3973014 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.68 43.0 4.95e-01 71.3% 92.3%
4969117 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 48.0 4.79e-01 75.5% 70.0%
4678741 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 51.0 5.61e-01 79.8% 100.0%
352428 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.68 47.0 4.85e-01 72.3% 77.5%
3587762 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 51.0 5.26e-01 79.8% 85.2%
3943901 101.1.4.20 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_37 0.67 47.0 4.96e-01 74.5% 81.2%
3985846 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 49.0 5.03e-01 76.6% 82.2%
3289357 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.66 48.0 4.83e-01 76.6% 91.6%
3952098 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.66 47.0 5.05e-01 75.5% 90.0%
3588760 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.66 51.0 4.92e-01 81.9% 93.3%
3285836 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.66 48.0 5.09e-01 75.5% 95.0%
4982971 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.65 49.0 5.21e-01 78.7% 92.5%
4061717 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.65 48.0 4.67e-01 78.7% 93.3%
3988174 632.19.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 0.64 45.0 4.73e-01 73.4% 94.1%
4940450 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.63 44.0 4.77e-01 75.5% 92.0%
5000483 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.62 49.0 5.09e-01 88.3% 95.3%
3987118 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.62 45.0 4.64e-01 75.5% 85.9%
4038777 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.62 49.0 4.94e-01 85.1% 91.6%
5057498 5054.1.1.6 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.62 49.0 4.05e-01 86.2% 89.1%
3515689 633.21.1.0 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.61 46.0 3.57e-01 78.7% 80.0%
3972318 5067.1.1.0 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.59 46.0 2.97e-01 84.0% 80.9%
4507416 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.58 46.0 4.43e-01 86.2% 100.0%
4968016 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.56 41.0 3.84e-01 75.5% 90.4%
1772495 10.12.1.118 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30252 0.55 46.0 3.53e-01 91.5% 73.6%