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KU935715.1__AND75199.1__ME3_38__00038

Bact-Vir

KU935715.1__AND75199.1__ME3_38__00038

Identity

Accession:
KU935715 ↗
Kingdom:
phage

Quality

68.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-137
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v43A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 39.0 4.89e-01 91.1% 78.1%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 36.0 5.19e-01 86.1% 100.0%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.77 36.0 5.23e-01 86.1% 100.0%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.76 41.0 4.81e-01 91.1% 74.6%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 37.0 4.84e-01 93.1% 84.5%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 36.0 5.02e-01 86.1% 98.0%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 38.0 4.91e-01 90.1% 87.9%
3d31A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.72 40.0 4.74e-01 93.1% 78.9%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.71 42.0 5.08e-01 93.1% 89.6%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.71 41.0 5.01e-01 93.1% 88.1%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 43.0 4.06e-01 100.0% 54.9%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 38.0 4.73e-01 91.1% 93.4%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 45.0 4.40e-01 100.0% 71.6%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 42.0 4.44e-01 100.0% 80.4%
3k59A01 2.40.50.590 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel 0.60 43.0 4.61e-01 100.0% 88.2%
3kf6A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 43.0 3.89e-01 100.0% 55.9%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 42.0 4.39e-01 100.0% 80.2%
1gm5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 43.0 4.30e-01 100.0% 76.5%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 43.0 3.87e-01 100.0% 56.4%
4l5rC02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 40.0 4.25e-01 100.0% 83.1%
5zg8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 43.0 4.33e-01 100.0% 78.4%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 42.0 3.78e-01 100.0% 56.0%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 40.0 4.35e-01 99.0% 91.4%
2d9uA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 29.0 3.30e-01 82.2% 67.6%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 45.0 4.57e-01 100.0% 90.8%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 43.0 3.77e-01 100.0% 56.8%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 43.0 3.69e-01 100.0% 55.4%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 29.0 3.29e-01 94.1% 69.7%
2b39A13 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 42.0 3.88e-01 100.0% 65.4%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 32.0 3.55e-01 94.1% 78.2%
4hikA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 46.0 4.20e-01 100.0% 77.5%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 45.0 4.00e-01 100.0% 69.7%
3kewA01 2.40.30.130 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.50 35.0 3.85e-01 90.1% 88.1%
3jqoA01 2.40.128.260 Mainly Beta › Beta Barrel › Lipocalin › Type IV secretion system, VirB10/TraB/TrbI 0.50 42.0 3.84e-01 94.1% 84.3%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4281449 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.73 41.0 3.78e-01 94.1% 43.8%
4444537 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.73 42.0 4.12e-01 94.1% 53.2%
3164388 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.73 39.0 4.74e-01 93.1% 81.5%
3943796 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.72 41.0 4.62e-01 93.1% 72.5%
4461636 2.1.1.100 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM_2 0.72 45.0 5.40e-01 99.0% 94.2%
4497266 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.72 42.0 4.03e-01 95.0% 51.8%
3963617 2.4.1.4 beta barrels › OB-fold › MOP-like › MOP-like › FbpC_C_terminal 0.71 39.0 4.74e-01 93.1% 83.1%
3988584 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.71 40.0 4.11e-01 94.1% 57.0%
5072315 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.70 41.0 3.85e-01 94.1% 48.0%
5020056 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.69 41.0 3.91e-01 94.1% 50.8%
4994226 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.69 42.0 3.93e-01 94.1% 49.6%
4311691 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.69 41.0 3.69e-01 94.1% 44.4%
4052370 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 42.0 5.09e-01 100.0% 95.4%
3969312 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.68 40.0 4.71e-01 94.1% 84.3%
3387994 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.68 40.0 4.50e-01 94.1% 75.0%
4951344 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.68 40.0 3.83e-01 94.1% 51.3%
4944053 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 46.0 5.22e-01 100.0% 94.7%
3992385 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 44.0 4.91e-01 100.0% 87.5%
3385864 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.65 38.0 4.82e-01 93.1% 98.3%
4488657 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.64 44.0 4.05e-01 93.1% 54.6%
4068524 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.63 43.0 4.00e-01 94.1% 55.8%
4547794 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.62 43.0 4.01e-01 94.1% 56.2%
3967128 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.62 39.0 4.69e-01 94.1% 92.9%
4961931 2.4.1.7 beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK 0.62 40.0 3.54e-01 94.1% 46.4%
3839111 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 43.0 4.59e-01 100.0% 82.2%
3544107 2.1.1.288 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF4502 0.60 50.0 5.22e-01 100.0% 96.8%
3596264 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 48.0 4.72e-01 100.0% 80.0%
3856954 375.1.1.308 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4502 0.59 50.0 5.14e-01 100.0% 96.8%
4606349 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 40.0 4.15e-01 100.0% 74.7%
4927128 2.3.1.0 beta barrels › OB-fold › TIMP-like › TIMP-like 0.58 43.0 4.37e-01 100.0% 78.0%
5052151 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.58 47.0 4.56e-01 100.0% 76.5%
3702749 2.1.1.28 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C 0.58 48.0 4.67e-01 99.0% 80.9%
3716787 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 48.0 4.66e-01 99.0% 80.9%
4965843 2.4.1.19 beta barrels › OB-fold › MOP-like › MOP-like › DUF7861 0.58 44.0 4.57e-01 96.0% 84.0%
3507463 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 49.0 4.72e-01 100.0% 81.7%
3833180 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 46.0 4.43e-01 100.0% 75.7%
3567962 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.57 44.0 4.14e-01 100.0% 66.4%
3179184 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 43.0 4.60e-01 100.0% 92.2%
3599542 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 46.0 4.53e-01 100.0% 82.7%
3373621 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 42.0 4.67e-01 93.1% 98.8%
3475071 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.56 49.0 4.94e-01 100.0% 95.0%
4523548 4.8.1.35 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 0.56 34.0 3.64e-01 97.0% 71.8%
3406670 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.55 48.0 4.22e-01 100.0% 64.0%
3542540 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.55 42.0 4.07e-01 100.0% 71.3%
5037634 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 39.0 4.14e-01 100.0% 89.4%
4024809 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 42.0 4.46e-01 100.0% 94.4%
1871017 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.54 43.0 3.65e-01 100.0% 51.8%
4286148 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.53 43.0 3.79e-01 100.0% 59.3%
3164941 129.1.1.99 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF4131 0.53 44.0 4.50e-01 100.0% 91.0%
4338451 2.4.1.3 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.53 45.0 4.15e-01 94.1% 72.8%
3701262 2.1.1.225 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 0.53 47.0 4.38e-01 100.0% 86.2%
3830803 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 44.0 4.43e-01 100.0% 88.6%
3934388 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.52 42.0 3.91e-01 100.0% 69.6%
3893747 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.52 42.0 3.72e-01 100.0% 60.0%
4030230 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 46.0 3.99e-01 99.0% 98.7%
3905875 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.52 39.0 3.58e-01 100.0% 60.7%
3967545 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.51 47.0 3.99e-01 100.0% 83.7%
3469751 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.50 46.0 4.04e-01 100.0% 71.7%
3248732 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 42.0 3.91e-01 90.1% 98.4%
3891382 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.50 42.0 3.69e-01 100.0% 60.0%
4633023 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.50 46.0 4.12e-01 100.0% 97.1%
4329624 2.4.1.12 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.50 42.0 4.19e-01 94.1% 85.7%
D2 high residues 149-232
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l0iA01 1.20.120.1520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 41.0 3.27e-01 79.8% 55.7%
3rrxA01 3.20.20.300 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain 0.53 45.0 3.06e-01 100.0% 79.1%
4l7aA00 3.40.390.70 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › 0.51 39.0 2.83e-01 84.5% 70.5%
3w0eA00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.50 28.0 3.08e-01 73.8% 66.2%
3qxzA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.50 31.0 3.52e-01 79.8% 86.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3963136 3317.1.1.0 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain 0.54 46.0 3.97e-01 97.6% 85.7%