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KU935715.1__AND75202.1__ME3_41__00041

Bact-Vir

KU935715.1__AND75202.1__ME3_41__00041

Identity

Accession:
KU935715 ↗
Kingdom:
phage

Quality

44.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Metrivirus› Acinetobacter_phage_vB_AbaM_ME3

TaxID: 1837876

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 294-391
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3e3vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 36.0 4.72e-01 77.6% 100.0%
1dhnA00 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.64 48.0 4.52e-01 79.6% 86.8%
2jv2A00 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.61 43.0 4.72e-01 100.0% 93.4%
1iruI00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.61 45.0 3.44e-01 77.6% 65.0%
1rypK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.60 46.0 3.71e-01 81.6% 96.0%
2ph7A01 1.10.3400.10 Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like 0.59 42.0 3.86e-01 73.5% 63.7%
2k7bA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 40.0 4.37e-01 85.7% 93.4%
3x1oA00 1.20.120.1790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.57 48.0 4.18e-01 92.9% 63.8%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 4.14e-01 80.6% 88.8%
4lhpF00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.53 42.0 3.90e-01 86.7% 100.0%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.53 39.0 4.24e-01 76.5% 95.0%
3eujB00 1.10.225.40 Mainly Alpha › Orthogonal Bundle › NK-Lysin › MukF, C-terminal domain 0.53 40.0 4.13e-01 79.6% 100.0%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 39.0 4.18e-01 78.6% 97.5%
5wtpA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.53 43.0 4.00e-01 88.8% 98.4%
1tuzA00 1.10.238.110 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Diacylglycerol kinase alpha. 0.52 44.0 4.16e-01 92.9% 84.7%
1qasA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 38.0 3.95e-01 76.5% 86.4%
1q5qA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 45.0 3.46e-01 94.9% 72.1%
7o1rA01 1.10.489.10 Mainly Alpha › Orthogonal Bundle › Chloroperoxidase › Chloroperoxidase-like 0.51 42.0 3.46e-01 92.9% 83.9%
1j09A05 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 42.0 4.26e-01 95.9% 98.0%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 34.0 3.76e-01 76.5% 89.6%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4565831 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.73 61.0 6.30e-01 100.0% 98.9%
3977755 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.68 54.0 5.72e-01 99.0% 98.8%
3614366 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 47.0 3.84e-01 77.6% 67.4%
3502186 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 5.09e-01 85.7% 100.0%
5042185 229.1.1.1 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 0.61 44.0 4.71e-01 100.0% 92.5%
3313414 229.1.1.7 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › TRIP13_N 0.61 48.0 5.04e-01 100.0% 95.6%
4997248 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 5.00e-01 90.8% 94.0%
3591264 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 48.0 3.97e-01 95.9% 47.8%
3253867 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.60 46.0 4.15e-01 82.7% 70.4%
5051570 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 45.0 4.26e-01 79.6% 82.6%
4014413 7575.1.1.0 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.59 49.0 3.65e-01 89.8% 80.8%
3733040 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.59 43.0 4.51e-01 78.6% 87.8%
5064362 1137.2.1.1 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › GckA/TtuD-like domain 2 › GckA/TtuD-like domain 2 › MOFRL 0.59 47.0 3.79e-01 85.7% 98.4%
3582614 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.58 44.0 3.92e-01 80.6% 57.1%
4019332 101.1.2.86 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.58 41.0 4.30e-01 73.5% 97.8%
3700992 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 46.0 4.76e-01 86.7% 100.0%
3598642 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 44.0 4.01e-01 82.7% 70.7%
3279157 315.1.1.0 ↗ a+b two layers › Tautomerase/MIF-like › Tautomerase/MIF › Tautomerase/MIF 0.57 46.0 4.31e-01 88.8% 95.2%
3485400 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 42.0 4.14e-01 78.6% 100.0%
3611454 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 45.0 3.83e-01 86.7% 52.7%
5045249 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 43.0 4.63e-01 82.7% 100.0%
3720812 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.97e-01 77.6% 78.2%
4961780 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 4.71e-01 90.8% 100.0%
4966069 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 4.54e-01 88.8% 94.4%
3597985 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 39.0 4.21e-01 85.7% 91.3%
3740395 229.1.1.0 ↗ a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like 0.54 49.0 4.81e-01 100.0% 93.3%
5046227 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 4.01e-01 76.5% 85.9%
3279136 7575.1.1.1 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C14 0.54 45.0 3.49e-01 92.9% 91.4%
4218411 108.1.1.27 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.53 39.0 4.13e-01 88.8% 89.4%
3898186 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 41.0 3.40e-01 93.9% 47.4%
3574580 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 40.0 4.05e-01 83.7% 89.5%
3181297 101.1.2.119 ↗ alpha arrays › HTH › HTH › winged helix domain › Tau95 0.51 40.0 3.16e-01 88.8% 39.0%
5071094 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 37.0 4.00e-01 89.8% 95.0%
D2 medium residues 11-87
PDB
D3 medium residues 100-189
PDB