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KU935715.1__AND75462.1__ME3_301__00301
Bact-VirKU935715.1__AND75462.1__ME3_301__00301
Identity
- Accession:
- KU935715 ↗
- Kingdom:
- phage
Quality
84.6
mean pLDDT
Taxonomy
TaxID: 1837876
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-95
Domain cluster:
rep: MT110073.1__QIN95243.1__DLP3_080__00080__D41-113
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zb9A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 50.0 | 4.37e-01 | 73.4% | 83.3% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.61 | 35.0 | 3.63e-01 | 97.9% | 58.7% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.61 | 36.0 | 3.70e-01 | 98.9% | 59.6% |
| 1s55A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 38.0 | 3.15e-01 | 98.9% | 37.8% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 36.0 | 3.14e-01 | 100.0% | 38.2% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.60 | 48.0 | 4.58e-01 | 85.1% | 93.6% |
| 2db8A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 31.0 | 3.03e-01 | 100.0% | 41.8% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 36.0 | 3.16e-01 | 98.9% | 42.3% |
| 5wm1A02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 44.0 | 4.23e-01 | 80.9% | 78.9% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.57 | 37.0 | 4.20e-01 | 72.3% | 91.0% |
| 2h6uA00 | 2.60.40.180 | Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain | 0.57 | 33.0 | 3.11e-01 | 100.0% | 45.6% |
| 2felA00 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.56 | 41.0 | 2.83e-01 | 78.7% | 54.0% |
| 3pdiA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 42.0 | 3.59e-01 | 80.9% | 78.6% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.55 | 37.0 | 3.99e-01 | 72.3% | 82.5% |
| 3ll9B00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.54 | 49.0 | 3.59e-01 | 100.0% | 69.5% |
| 5eliA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.69e-01 | 100.0% | 63.4% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 41.0 | 3.38e-01 | 81.9% | 83.1% |
| 6dgiA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 37.0 | 3.28e-01 | 74.5% | 87.5% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.53 | 34.0 | 3.82e-01 | 76.6% | 84.0% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.53 | 31.0 | 3.60e-01 | 98.9% | 85.7% |
| 4i1eA03 | 1.25.10.30 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain | 0.52 | 37.0 | 3.27e-01 | 74.5% | 61.2% |
| 4rr9A01 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.52 | 42.0 | 3.78e-01 | 89.4% | 85.1% |
| 2pttB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.39e-01 | 100.0% | 62.0% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.51 | 39.0 | 3.16e-01 | 83.0% | 100.0% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.50 | 40.0 | 4.20e-01 | 97.9% | 97.6% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5052820 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.69 | 49.0 | 3.89e-01 | 74.5% | 82.1% |
| 4147528 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.67 | 48.0 | 5.46e-01 | 94.7% | 100.0% |
| 3224103 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 47.0 | 4.23e-01 | 75.5% | 83.2% |
| 3413946 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.64 | 45.0 | 5.08e-01 | 88.3% | 98.6% |
| 3217316 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.62 | 45.0 | 4.34e-01 | 75.5% | 92.4% |
| 3703828 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 34.0 | 2.93e-01 | 100.0% | 34.2% |
| 5054328 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.58 | 46.0 | 4.68e-01 | 87.2% | 96.8% |
| 5057792 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.57 | 46.0 | 4.65e-01 | 87.2% | 96.8% |
| 3229918 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 41.0 | 4.08e-01 | 76.6% | 98.0% |
| 5028291 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.57 | 45.0 | 4.50e-01 | 86.2% | 95.8% |
| 5030291 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 48.0 | 4.56e-01 | 90.4% | 79.6% |
| 4462188 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.56 | 45.0 | 4.24e-01 | 87.2% | 80.0% |
| 4939878 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.56 | 45.0 | 4.11e-01 | 87.2% | 73.6% |
| 3406838 | 150.3.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine | 0.56 | 38.0 | 3.13e-01 | 70.2% | 81.1% |
| 5053511 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.56 | 44.0 | 4.32e-01 | 87.2% | 87.6% |
| 3929356 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 45.0 | 4.55e-01 | 89.4% | 94.7% |
| 4947028 | 230.6.1.0 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain | 0.55 | 44.0 | 4.32e-01 | 87.2% | 89.3% |
| 3772334 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.54 | 39.0 | 2.83e-01 | 75.5% | 53.0% |
| 3222726 | 109.4.1.1816 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › KANSL3_1st | 0.54 | 45.0 | 3.72e-01 | 90.4% | 82.4% |
| 3537190 | 2004.5.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › Njmu-R1 | 0.54 | 39.0 | 3.44e-01 | 76.6% | 64.8% |
| 3260332 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.54 | 41.0 | 3.33e-01 | 79.8% | 83.5% |
| 5062790 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.54 | 42.0 | 4.00e-01 | 86.2% | 78.3% |
| 4945969 | 230.6.1.0 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain | 0.53 | 42.0 | 4.19e-01 | 87.2% | 92.0% |
| 5082633 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.53 | 42.0 | 4.03e-01 | 87.2% | 79.8% |
| 5064380 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.53 | 43.0 | 4.24e-01 | 88.3% | 92.9% |
| 5027891 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.53 | 42.0 | 4.24e-01 | 87.2% | 96.8% |
| 5070793 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.53 | 42.0 | 4.22e-01 | 87.2% | 96.8% |
| 3415030 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.53 | 43.0 | 4.28e-01 | 88.3% | 90.0% |
| 4032935 | 7515.1.1.1 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Alk_phosphatase | 0.52 | 46.0 | 3.01e-01 | 97.9% | 100.0% |
| 4079732 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.52 | 45.0 | 3.79e-01 | 97.9% | 80.0% |
| 4873862 | 866.1.1.1 ↗ | a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › FliM | 0.51 | 38.0 | 3.26e-01 | 79.8% | 86.0% |