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KU935715.1__AND75467.1__ME3_306__00306

Bact-Vir

KU935715.1__AND75467.1__ME3_306__00306

Identity

Accession:
KU935715 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Metrivirus› Acinetobacter_phage_vB_AbaM_ME3

TaxID: 1837876

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-69
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 5.63e-01 100.0% 82.3%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 53.0 5.36e-01 100.0% 76.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.38e-01 100.0% 76.8%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.69 62.0 5.36e-01 100.0% 64.6%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 5.50e-01 100.0% 80.6%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 56.0 5.38e-01 100.0% 79.5%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.67 49.0 4.31e-01 100.0% 51.0%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 57.0 4.89e-01 100.0% 61.5%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 46.0 4.91e-01 90.8% 89.3%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.63 58.0 4.39e-01 100.0% 51.0%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 4.93e-01 100.0% 77.3%
1vwxZ00 2.30.30.770 Mainly Beta › Roll › SH3 type barrels. › 0.62 56.0 4.41e-01 100.0% 54.8%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.62 56.0 4.30e-01 100.0% 48.6%
1jc4A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.62 43.0 3.29e-01 90.8% 31.7%
2vgmA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.62 54.0 4.47e-01 100.0% 54.1%
2kx2A00 3.30.780.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.62 45.0 3.95e-01 76.9% 87.5%
1vwxB03 3.30.1430.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › 0.61 44.0 3.55e-01 75.4% 100.0%
1m4zA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.61 55.0 3.87e-01 100.0% 48.0%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.61 54.0 4.86e-01 100.0% 77.8%
1jqpA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 54.0 3.70e-01 100.0% 34.2%
4oelB00 2.40.50.170 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C 0.61 44.0 4.39e-01 92.3% 73.9%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 51.0 3.33e-01 96.9% 29.1%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.60 55.0 4.01e-01 100.0% 65.3%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.60 42.0 4.34e-01 93.8% 77.8%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 3.00e-01 92.3% 92.9%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 50.0 3.28e-01 96.9% 29.7%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.59 52.0 4.49e-01 100.0% 66.3%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.59 52.0 4.92e-01 100.0% 82.9%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.59 53.0 3.93e-01 100.0% 58.3%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 44.0 3.87e-01 80.0% 58.5%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.59 54.0 5.14e-01 100.0% 87.8%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 47.0 4.12e-01 89.2% 90.9%
3grdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 49.0 3.97e-01 96.9% 79.5%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.58 39.0 4.27e-01 92.3% 95.8%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 47.0 4.02e-01 89.2% 89.3%
1tzzB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 40.0 3.34e-01 73.8% 82.4%
6hswA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 41.0 2.54e-01 76.9% 36.8%
7bj4A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 47.0 2.96e-01 96.9% 26.2%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 48.0 3.09e-01 100.0% 30.7%
6w1kA01 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.56 45.0 2.93e-01 89.2% 26.6%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 47.0 3.02e-01 96.9% 24.1%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 44.0 3.76e-01 89.2% 88.2%
4wrnA02 2.60.40.3210 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-N domain 0.55 43.0 3.67e-01 86.2% 91.4%
2axwA01 2.60.40.1570 Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin 0.54 39.0 3.24e-01 76.9% 95.8%
3ff2A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 3.77e-01 96.9% 86.3%
6a5gA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 44.0 3.57e-01 96.9% 85.3%
2imjD01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 44.0 3.52e-01 96.9% 68.3%
2p25A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 45.0 3.69e-01 95.4% 83.2%
4jgwA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.52 34.0 2.69e-01 70.8% 28.2%
5uj1A03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.51 42.0 3.28e-01 98.5% 77.2%
3t1oA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 42.0 3.07e-01 93.8% 81.2%
2aneH00 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.51 44.0 3.72e-01 96.9% 92.7%
6iy8A01 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.50 41.0 2.97e-01 90.8% 50.8%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4427477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 61.0 5.32e-01 100.0% 54.7%
3799904 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.73 64.0 3.87e-01 100.0% 15.5%
3585492 4.1.1.103 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12 0.72 64.0 5.27e-01 100.0% 56.4%
3511007 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.72 58.0 4.67e-01 100.0% 46.7%
3259841 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 62.0 6.07e-01 100.0% 88.6%
4123449 4.8.1.35 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 0.72 63.0 5.74e-01 96.9% 72.9%
3875355 4.1.1.103 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12 0.70 63.0 4.43e-01 100.0% 33.7%
3533686 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.70 63.0 3.80e-01 100.0% 16.4%
3213653 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 60.0 5.62e-01 100.0% 92.5%
3495880 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.68 60.0 3.65e-01 100.0% 15.3%
3188394 4.8.1.22 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.67 60.0 4.89e-01 100.0% 62.5%
3631313 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.67 58.0 4.22e-01 100.0% 36.8%
3717955 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.67 60.0 3.76e-01 100.0% 32.5%
3185466 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.66 58.0 4.11e-01 100.0% 34.0%
3645842 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.66 54.0 5.07e-01 100.0% 73.8%
None — 0.66 60.0 4.24e-01 100.0% 38.7%
4013811 4.8.1.22 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.65 56.0 5.13e-01 100.0% 75.6%
3255397 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 59.0 4.40e-01 100.0% 50.3%
3830813 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.64 58.0 4.14e-01 100.0% 40.0%
4615629 4.1.1.449 ↗ beta barrels › SH3 › SH3 › SH3 › DUF1292 0.64 56.0 5.13e-01 96.9% 75.3%
3249352 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.64 56.0 4.51e-01 100.0% 57.7%
3931232 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 50.0 4.03e-01 84.6% 66.4%
3272197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.69e-01 100.0% 60.0%
4028378 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.63 55.0 4.44e-01 100.0% 57.7%
3205559 4.8.1.22 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.63 55.0 4.28e-01 100.0% 50.3%
4215369 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.63 56.0 4.51e-01 100.0% 60.0%
4941831 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.62 54.0 4.38e-01 100.0% 58.5%
3639466 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.62 54.0 4.23e-01 100.0% 51.7%
3523144 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.62 56.0 3.97e-01 100.0% 40.0%
3499940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 54.0 4.00e-01 100.0% 43.5%
3495220 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.61 55.0 4.11e-01 100.0% 45.0%
4389663 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.61 46.0 3.43e-01 92.3% 32.5%
3584922 5.1.4.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.61 50.0 3.44e-01 93.8% 54.0%
4204046 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.61 53.0 4.38e-01 100.0% 61.7%
4941652 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.61 53.0 4.35e-01 100.0% 60.0%
4382339 304.112.1.1 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoL1 0.61 45.0 3.37e-01 90.8% 31.9%
3229927 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.61 45.0 3.37e-01 92.3% 31.5%
3260119 304.112.1.1 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoL1 0.60 44.0 3.20e-01 89.2% 29.4%
5035282 4.23.1.2 ↗ beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.60 52.0 4.24e-01 100.0% 60.8%
3920725 304.112.1.1 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoL1 0.60 45.0 3.39e-01 93.8% 32.1%
3743024 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.59 45.0 3.62e-01 81.5% 80.8%
3750435 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.58 44.0 3.26e-01 93.8% 30.3%
5036515 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.58 45.0 4.02e-01 87.7% 96.0%
3405436 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 47.0 3.99e-01 93.8% 77.4%
3960415 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 47.0 3.81e-01 87.7% 68.3%
4122961 2.1.1.122 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 0.57 46.0 4.03e-01 89.2% 95.0%
4282790 3480.1.1.0 ↗ a+b duplicates or obligate multimers › Lipoprotein-associated type-17-domain › Lipoprotein-associated type-17-domain › Lipoprotein-associated type-17-domain 0.57 47.0 4.02e-01 92.3% 67.0%
3954736 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.56 48.0 3.65e-01 96.9% 68.1%
3535865 11.1.1.640 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N 0.55 41.0 3.36e-01 83.1% 85.9%
3797033 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.55 45.0 3.48e-01 92.3% 81.3%
3452408 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 46.0 3.03e-01 98.5% 26.6%
169779 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.53 45.0 3.77e-01 96.9% 86.3%
3284948 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 38.0 3.56e-01 80.0% 100.0%
3457651 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 40.0 2.70e-01 87.7% 31.7%
3576754 809.1.1.0 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.52 40.0 3.42e-01 86.2% 64.5%
5040130 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.51 43.0 3.93e-01 95.4% 97.8%
3817752 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 41.0 4.04e-01 92.3% 94.3%
3460699 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.51 41.0 3.80e-01 92.3% 78.8%
4080326 243.1.1.76 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF25976 0.51 43.0 3.62e-01 100.0% 85.0%
3996695 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.50 35.0 3.67e-01 86.2% 89.1%